Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_K06
         (772 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p...    31   1.2  
Z67754-2|CAA91752.2|  677|Caenorhabditis elegans Hypothetical pr...    30   2.1  
U41543-12|AAZ91345.1|  401|Caenorhabditis elegans Groundhog (hed...    30   2.1  
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr...    29   2.8  
U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like pr...    29   4.8  
Z72514-1|CAA96674.1|  428|Caenorhabditis elegans Hypothetical pr...    28   6.4  
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical...    28   8.5  
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical...    28   8.5  

>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
           protein T20D3.11 protein.
          Length = 1843

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 719 PYASSHPPLRSRXHQPDHQIPDS 651
           P +S HPPL S  H  +H  PD+
Sbjct: 66  PTSSHHPPLNSSSHHSNHNYPDT 88


>Z67754-2|CAA91752.2|  677|Caenorhabditis elegans Hypothetical
           protein C34E11.2 protein.
          Length = 677

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 8/92 (8%)
 Frame = -3

Query: 692 RSRXHQPDH--QIPDSIHQPPQT*HPFPSI---PL-TPY*KEFAPGLKPPL--SSEAPSA 537
           +S  H P+H   +P S    P      P++   P+ TP     A  L PP+  SS  P  
Sbjct: 442 QSPAHTPEHVCPLPRSFSSTPAAEQFLPTLEGAPVWTPSAVSTASELSPPIPMSSPPPPL 501

Query: 536 YLTPSSLGMXKGVSPPYFQVNDESQASRLISR 441
             TP         S PY Q+N+    +R  +R
Sbjct: 502 PRTPQPNNGLPNASLPYNQINNAGSFTRTAAR 533


>U41543-12|AAZ91345.1|  401|Caenorhabditis elegans Groundhog
           (hedgehog-like family)protein 7 protein.
          Length = 401

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
 Frame = -3

Query: 698 PLRSRXHQPDHQIPDSIHQP-PQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPSAYLTPS 522
           P   +  QP    P     P PQ   P P+ P  PY +   P   PPL+S   +A   P+
Sbjct: 37  PYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPLASYPQNAVPVPA 96


>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein
            F40H6.5 protein.
          Length = 1288

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -2

Query: 726  VSPLCIKPP-SPAISXTSTRSSNPRFHTPTTPDLTSISINPPD 601
            VS  C++PP +P  + ++T ++ P+  T +T   TS +I   D
Sbjct: 1145 VSMACVRPPTTPTTTTSTTTTTTPKLTTTSTLPSTSTAIATTD 1187


>U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like
           protease protein 6 protein.
          Length = 360

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +2

Query: 572 TPARTPSSTASGGLMEMDVKSGVVGVWNRGFDDR 673
           T    P  + +GG+ E+D ++ VVGV+ + F ++
Sbjct: 276 TSVACPGDSGAGGVKEIDKRTTVVGVFTKKFREK 309


>Z72514-1|CAA96674.1|  428|Caenorhabditis elegans Hypothetical
           protein T10B10.1 protein.
          Length = 428

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 20/67 (29%), Positives = 24/67 (35%), Gaps = 1/67 (1%)
 Frame = -3

Query: 719 PYASSHPPLRSRXHQPDHQIPDSIHQPPQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPS 540
           P  +   P       P    P   +  P   +P PS P   Y  E A  + PP   E PS
Sbjct: 353 PSPAPQEPAHPSPSYPSPSYPSPSYPSPS--YPSPSYPSPSYPAEPAYSVPPPAKPEQPS 410

Query: 539 -AYLTPS 522
             Y  PS
Sbjct: 411 GGYDAPS 417


>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18b protein.
          Length = 1459

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 563  PLSSEAPSAYLTPSSLGMXKGVSPP 489
            P+++EAP+A   PS   + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227


>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18a protein.
          Length = 1456

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 563  PLSSEAPSAYLTPSSLGMXKGVSPP 489
            P+++EAP+A   PS   + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,296,845
Number of Sequences: 27780
Number of extensions: 369610
Number of successful extensions: 1356
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1350
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)