Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_K03
         (783 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...   326   1e-91
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...   326   1e-91
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   4.2  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  326 bits (802), Expect = 1e-91
 Identities = 151/190 (79%), Positives = 166/190 (87%)
 Frame = -2

Query: 746 QAXNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXATSLCFVYPLDFARTRLAAD 567
           QA NFAFKDKYKQVFLGGVDK TQF RYF           ATSLCFVYPLDFARTRLAAD
Sbjct: 87  QALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAAD 146

Query: 566 VGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPD 387
           VGK  G+REF+GLGNC++KIFK+DG+ GLYRGFGVSVQGIIIYRA+YFGFYDTARGMLPD
Sbjct: 147 VGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPD 206

Query: 386 PKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKT 207
           PK TP +ISW IAQ VTTVAGI+SYPFDTVRRRMMMQSGRAKS+ILYK+T+HCWATI KT
Sbjct: 207 PKKTPFLISWGIAQVVTTVAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKT 266

Query: 206 EGTSAFXQGS 177
           EG +AF +G+
Sbjct: 267 EGGNAFFKGA 276



 Score = 51.6 bits (118), Expect = 8e-09
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = -3

Query: 184 KGAFSNVLRGTGGAFVLVLYDEIKKVL 104
           KGAFSN+LRGTGGA VLVLYDEIK +L
Sbjct: 274 KGAFSNILRGTGGALVLVLYDEIKNLL 300



 Score = 35.5 bits (78), Expect = 6e-04
 Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 6/129 (4%)
 Frame = -2

Query: 548 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPD--PKNT 375
           ++ + G+ +C  +I K  G +  +RG   +V      +A  F F D  + +      KNT
Sbjct: 50  EQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNT 109

Query: 374 PIVISWAIAQTVTTVAGIIS----YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKT 207
             +  +         AG  S    YP D  R R+    G+A  +  +    +C   I K 
Sbjct: 110 QFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKA 169

Query: 206 EGTSAFXQG 180
           +G +   +G
Sbjct: 170 DGITGLYRG 178



 Score = 26.2 bits (55), Expect = 0.34
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = -2

Query: 356 AIAQTVTTVAGIISYPFDTVRRRMMMQ--SGRAKSDILYKNTIHCWATIAKTEGTSAFXQ 183
           A A + TTVA     P + V+  + +Q  S +   +  YK  I C+  I K +G  ++ +
Sbjct: 20  AAAISKTTVA-----PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWR 74

Query: 182 GSL 174
           G+L
Sbjct: 75  GNL 77



 Score = 25.0 bits (52), Expect = 0.79
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -1

Query: 780 NFANVIRYFPXPGXQF 733
           N ANVIRYFP     F
Sbjct: 76  NLANVIRYFPTQALNF 91


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  326 bits (802), Expect = 1e-91
 Identities = 151/190 (79%), Positives = 166/190 (87%)
 Frame = -2

Query: 746 QAXNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXATSLCFVYPLDFARTRLAAD 567
           QA NFAFKDKYKQVFLGGVDK TQF RYF           ATSLCFVYPLDFARTRLAAD
Sbjct: 87  QALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAAD 146

Query: 566 VGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPD 387
           VGK  G+REF+GLGNC++KIFK+DG+ GLYRGFGVSVQGIIIYRA+YFGFYDTARGMLPD
Sbjct: 147 VGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPD 206

Query: 386 PKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKT 207
           PK TP +ISW IAQ VTTVAGI+SYPFDTVRRRMMMQSGRAKS+ILYK+T+HCWATI KT
Sbjct: 207 PKKTPFLISWGIAQVVTTVAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKT 266

Query: 206 EGTSAFXQGS 177
           EG +AF +G+
Sbjct: 267 EGGNAFFKGA 276



 Score = 51.6 bits (118), Expect = 8e-09
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = -3

Query: 184 KGAFSNVLRGTGGAFVLVLYDEIKKVL 104
           KGAFSN+LRGTGGA VLVLYDEIK +L
Sbjct: 274 KGAFSNILRGTGGALVLVLYDEIKNLL 300



 Score = 35.5 bits (78), Expect = 6e-04
 Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 6/129 (4%)
 Frame = -2

Query: 548 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPD--PKNT 375
           ++ + G+ +C  +I K  G +  +RG   +V      +A  F F D  + +      KNT
Sbjct: 50  EQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNT 109

Query: 374 PIVISWAIAQTVTTVAGIIS----YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKT 207
             +  +         AG  S    YP D  R R+    G+A  +  +    +C   I K 
Sbjct: 110 QFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKA 169

Query: 206 EGTSAFXQG 180
           +G +   +G
Sbjct: 170 DGITGLYRG 178



 Score = 26.2 bits (55), Expect = 0.34
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = -2

Query: 356 AIAQTVTTVAGIISYPFDTVRRRMMMQ--SGRAKSDILYKNTIHCWATIAKTEGTSAFXQ 183
           A A + TTVA     P + V+  + +Q  S +   +  YK  I C+  I K +G  ++ +
Sbjct: 20  AAAISKTTVA-----PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWR 74

Query: 182 GSL 174
           G+L
Sbjct: 75  GNL 77



 Score = 25.0 bits (52), Expect = 0.79
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -1

Query: 780 NFANVIRYFPXPGXQF 733
           N ANVIRYFP     F
Sbjct: 76  NLANVIRYFPTQALNF 91


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +3

Query: 114 LISSYKTSTKAPPVPLRTLEKAPL 185
           L++++KT T+ P    + LEK P+
Sbjct: 134 LVNAFKTLTQEPKNTNKFLEKGPV 157


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,790
Number of Sequences: 438
Number of extensions: 4153
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)