Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_J04
(778 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50857-5|CAJ43436.1| 719|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z50857-4|CAC42283.1| 694|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z50857-3|CAC42284.1| 753|Caenorhabditis elegans Hypothetical pr... 34 0.13
AF136239-1|AAD34463.1| 694|Caenorhabditis elegans DAF-12 A2 pro... 34 0.13
AF136238-1|AAD34462.1| 753|Caenorhabditis elegans DAF-12 A1 pro... 34 0.13
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 33 0.23
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 33 0.23
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 33 0.23
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 33 0.23
U80445-11|AAB37801.2| 479|Caenorhabditis elegans Hypothetical p... 31 1.2
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 30 1.6
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 30 1.6
U42436-3|AAL02471.1| 498|Caenorhabditis elegans Hypothetical pr... 30 2.1
U42436-2|AAL02470.2| 552|Caenorhabditis elegans Hypothetical pr... 30 2.1
AL132863-1|CAB60573.1| 477|Caenorhabditis elegans Hypothetical ... 30 2.1
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 3.7
AF000195-2|AAC24267.1| 316|Caenorhabditis elegans Hypothetical ... 29 3.7
Z99942-1|CAB17068.2| 454|Caenorhabditis elegans Hypothetical pr... 29 4.9
AF026210-5|AAB71287.1| 632|Caenorhabditis elegans Hypothetical ... 29 4.9
AF026210-4|AAT81192.1| 627|Caenorhabditis elegans Hypothetical ... 29 4.9
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z81586-4|CAB04688.2| 366|Caenorhabditis elegans Hypothetical pr... 28 6.5
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 6.5
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein... 28 6.5
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 23 7.3
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 23 7.3
AL032637-11|CAA21622.3| 1119|Caenorhabditis elegans Hypothetical... 28 8.6
>Z50857-5|CAJ43436.1| 719|Caenorhabditis elegans Hypothetical
protein F11A1.3d protein.
Length = 719
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/66 (30%), Positives = 28/66 (42%)
Frame = +1
Query: 304 IGPPSPAPTPMLRWAGSATGDFFPLSSPRLVRGAPEPQRTTTPQDLSAEHRAPPXPSNRR 483
I PP P P+ GS+ D P S ++ + P ++ HRAPP N R
Sbjct: 238 ISPPGAQPYPLTSPVGSSASDSPPNRSLTMMHNGEKSPDGYDPNIMA--HRAPPPSFNNR 295
Query: 484 PLAGAG 501
P +G
Sbjct: 296 PKMDSG 301
>Z50857-4|CAC42283.1| 694|Caenorhabditis elegans Hypothetical
protein F11A1.3b protein.
Length = 694
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/66 (30%), Positives = 28/66 (42%)
Frame = +1
Query: 304 IGPPSPAPTPMLRWAGSATGDFFPLSSPRLVRGAPEPQRTTTPQDLSAEHRAPPXPSNRR 483
I PP P P+ GS+ D P S ++ + P ++ HRAPP N R
Sbjct: 213 ISPPGAQPYPLTSPVGSSASDSPPNRSLTMMHNGEKSPDGYDPNIMA--HRAPPPSFNNR 270
Query: 484 PLAGAG 501
P +G
Sbjct: 271 PKMDSG 276
>Z50857-3|CAC42284.1| 753|Caenorhabditis elegans Hypothetical
protein F11A1.3a protein.
Length = 753
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/66 (30%), Positives = 28/66 (42%)
Frame = +1
Query: 304 IGPPSPAPTPMLRWAGSATGDFFPLSSPRLVRGAPEPQRTTTPQDLSAEHRAPPXPSNRR 483
I PP P P+ GS+ D P S ++ + P ++ HRAPP N R
Sbjct: 272 ISPPGAQPYPLTSPVGSSASDSPPNRSLTMMHNGEKSPDGYDPNIMA--HRAPPPSFNNR 329
Query: 484 PLAGAG 501
P +G
Sbjct: 330 PKMDSG 335
>AF136239-1|AAD34463.1| 694|Caenorhabditis elegans DAF-12 A2
protein.
Length = 694
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/66 (30%), Positives = 28/66 (42%)
Frame = +1
Query: 304 IGPPSPAPTPMLRWAGSATGDFFPLSSPRLVRGAPEPQRTTTPQDLSAEHRAPPXPSNRR 483
I PP P P+ GS+ D P S ++ + P ++ HRAPP N R
Sbjct: 213 ISPPGAQPYPLTSPVGSSASDSPPNRSLTMMHNGEKSPDGYDPNIMA--HRAPPPSFNNR 270
Query: 484 PLAGAG 501
P +G
Sbjct: 271 PKMDSG 276
>AF136238-1|AAD34462.1| 753|Caenorhabditis elegans DAF-12 A1
protein.
Length = 753
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/66 (30%), Positives = 28/66 (42%)
Frame = +1
Query: 304 IGPPSPAPTPMLRWAGSATGDFFPLSSPRLVRGAPEPQRTTTPQDLSAEHRAPPXPSNRR 483
I PP P P+ GS+ D P S ++ + P ++ HRAPP N R
Sbjct: 272 ISPPGAQPYPLTSPVGSSASDSPPNRSLTMMHNGEKSPDGYDPNIMA--HRAPPPSFNNR 329
Query: 484 PLAGAG 501
P +G
Sbjct: 330 PKMDSG 335
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 33.1 bits (72), Expect = 0.23
Identities = 28/82 (34%), Positives = 32/82 (39%), Gaps = 1/82 (1%)
Frame = +2
Query: 215 TRPA*RLPTKPQRAPPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLP-PGTSSPSHLHD 391
TRPA P R P SG P A P P Y P P SPS+
Sbjct: 332 TRPA-PASQPPVREPETPDSGYPSPAPQEPAHPSPSYPSPSYPSPSYPSPSYPSPSYPSP 390
Query: 392 S*GAHQSHSAPPPHRTLVPSTG 457
S A ++S PPP + PS G
Sbjct: 391 SYPAEPAYSVPPPAKPEQPSGG 412
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 33.1 bits (72), Expect = 0.23
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 2/99 (2%)
Frame = +2
Query: 197 KFSSRQTRPA*RLPTKPQ--RAPPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLPPGTS 370
K + + A R P+ PQ +APP++ + P A AP A PPQ Y G P G
Sbjct: 580 KMDTSEAATAARPPSTPQAPQAPPVQAAPAPVQAPQAPQA-----PPQAYQGYGGPGGPP 634
Query: 371 SPSHLHDS*GAHQSHSAPPPHRTLVPSTGRPRHPAIDGP 487
++ + Q PPP + + + A GP
Sbjct: 635 QQAYRYPPQQGQQYSPYPPPQQQQQHQAQQAQSQAHYGP 673
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 33.1 bits (72), Expect = 0.23
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 2/99 (2%)
Frame = +2
Query: 197 KFSSRQTRPA*RLPTKPQ--RAPPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLPPGTS 370
K + + A R P+ PQ +APP++ + P A AP A PPQ Y G P G
Sbjct: 580 KMDTSEAATAARPPSTPQAPQAPPVQAAPAPVQAPQAPQA-----PPQAYQGYGGPGGPP 634
Query: 371 SPSHLHDS*GAHQSHSAPPPHRTLVPSTGRPRHPAIDGP 487
++ + Q PPP + + + A GP
Sbjct: 635 QQAYRYPPQQGQQYSPYPPPQQQQQHQAQQAQSQAHYGP 673
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 33.1 bits (72), Expect = 0.23
Identities = 31/108 (28%), Positives = 39/108 (36%), Gaps = 3/108 (2%)
Frame = +2
Query: 170 TPLXKARWAKFSSRQTRPA*RLPTKPQRAPPLRLSGDPGTAMCAP*ARLRRLPPQCYVGR 349
T L R++ + RP P K PP +G+P A R PP G
Sbjct: 16 TSLAAPRFSVGETASRRPP--PPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGT 73
Query: 350 DLPPGTSSPSHLHDS*GAHQSHSAPPPHRTLV---PSTGRPRHPAIDG 484
PP T P L G PPP T P TG P+ + +G
Sbjct: 74 PPPPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPPPPTGEPQDLSGEG 121
Score = 32.3 bits (70), Expect = 0.40
Identities = 26/72 (36%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = +1
Query: 268 AERRPRYRHVRAIGPPSPAPTPMLR-WAGSATGDFFPLSSPRLVRGAPEPQRTTTPQDLS 444
A RRP + G P+P PT + +G P P+ G+P P T PQDLS
Sbjct: 216 ASRRPP-PPPKGTGSPTPPPTGEPQDLSGEGNASRRPPPPPKGT-GSPPPPPTGEPQDLS 273
Query: 445 AE---HRAPPXP 471
E R PP P
Sbjct: 274 GEGNASRRPPPP 285
Score = 31.9 bits (69), Expect = 0.53
Identities = 26/86 (30%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Frame = +2
Query: 236 PTKPQRAPPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLPPGTSSPSHLHDS*GAHQSH 415
P K +PP +G+P A R PP G PP T P L G
Sbjct: 130 PPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSTE-GNASRR 188
Query: 416 SAPPPHRTLV---PSTGRPRHPAIDG 484
PPP T P TG P+ + +G
Sbjct: 189 PPPPPKGTGTPPPPPTGEPQDLSAEG 214
Score = 31.9 bits (69), Expect = 0.53
Identities = 31/112 (27%), Positives = 37/112 (33%)
Frame = +2
Query: 236 PTKPQRAPPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLPPGTSSPSHLHDS*GAHQSH 415
P K +PP +G+P A R PP G PP T P L S + S
Sbjct: 161 PPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPPTGEPQDL--SAEGYASR 218
Query: 416 SAPPPHRTLVPSTGRPRHPAIDGPWQEXXXXXXXXXXXXXXXXTNRGPRPPP 571
PPP + TG P P P Q+ P PPP
Sbjct: 219 RPPPPPK----GTGSPTPPPTGEP-QDLSGEGNASRRPPPPPKGTGSPPPPP 265
Score = 31.9 bits (69), Expect = 0.53
Identities = 26/86 (30%), Positives = 31/86 (36%), Gaps = 3/86 (3%)
Frame = +2
Query: 236 PTKPQRAPPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLPPGTSSPSHLHDS*GAHQSH 415
P K PP +G+P A R PP G PP T P L G
Sbjct: 192 PPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPKGTGSPTPPPTGEPQDLSGE-GNASRR 250
Query: 416 SAPPPHRT---LVPSTGRPRHPAIDG 484
PPP T P TG P+ + +G
Sbjct: 251 PPPPPKGTGSPPPPPTGEPQDLSGEG 276
Score = 31.1 bits (67), Expect = 0.92
Identities = 26/86 (30%), Positives = 31/86 (36%), Gaps = 3/86 (3%)
Frame = +2
Query: 236 PTKPQRAPPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLPPGTSSPSHLHDS*GAHQSH 415
P K PP +G+P A R PP G PP T P L G
Sbjct: 99 PPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGE-GNASRR 157
Query: 416 SAPPPHRT---LVPSTGRPRHPAIDG 484
PPP T P TG P+ + +G
Sbjct: 158 PPPPPKGTGSPPPPPTGEPQDLSTEG 183
Score = 29.9 bits (64), Expect = 2.1
Identities = 26/79 (32%), Positives = 30/79 (37%), Gaps = 3/79 (3%)
Frame = +2
Query: 236 PTKPQRAPPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLPPGTSSPSHLHDS*GAHQSH 415
PT P P LSG+ + P PP G PP T P L S + S
Sbjct: 230 PTPPPTGEPQDLSGEGNASRRPP-------PPPKGTGSPPPPPTGEPQDL--SGEGNASR 280
Query: 416 SAPPPHR---TLVPSTGRP 463
PPP + T P TG P
Sbjct: 281 RPPPPPKGTGTPPPPTGEP 299
Score = 27.9 bits (59), Expect = 8.6
Identities = 26/86 (30%), Positives = 30/86 (34%), Gaps = 3/86 (3%)
Frame = +2
Query: 236 PTKPQRAPPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLPPGTSSPSHLHDS*GAHQSH 415
P P P LS + G A P PP G PP T P L G
Sbjct: 74 PPPPPTGEPQDLSAEEGNASRRP------PPPPKGTGTPPPPPTGEPQDLSGE-GNASRR 126
Query: 416 SAPPPHRT---LVPSTGRPRHPAIDG 484
PPP T P TG P+ + +G
Sbjct: 127 PPPPPKGTGSPPPPPTGEPQDLSGEG 152
>U80445-11|AAB37801.2| 479|Caenorhabditis elegans Hypothetical
protein C50F2.8 protein.
Length = 479
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +1
Query: 292 HVRAIGPPSPAPTPMLRWAGSATGDFFPLSSPRLVRGAPEPQRTT 426
H A+ PSP TP+LR +G+ ++ P+ ++ + ++TT
Sbjct: 94 HALALDGPSPTMTPILRSSGTKNHNYAPIHQSAILLPQYQSRKTT 138
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 30.3 bits (65), Expect = 1.6
Identities = 27/83 (32%), Positives = 29/83 (34%), Gaps = 2/83 (2%)
Frame = +2
Query: 233 LPTKPQRAPPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLPPGTSSPSHLHDS*GAHQS 412
LP R P S P A P R +PP+ G PPG P G
Sbjct: 751 LPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG--- 807
Query: 413 HSAPP--PHRTLVPSTGRPRHPA 475
PP P R PS G P PA
Sbjct: 808 -MYPPLIPTRVPTPSNGAPEIPA 829
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 30.3 bits (65), Expect = 1.6
Identities = 27/83 (32%), Positives = 29/83 (34%), Gaps = 2/83 (2%)
Frame = +2
Query: 233 LPTKPQRAPPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLPPGTSSPSHLHDS*GAHQS 412
LP R P S P A P R +PP+ G PPG P G
Sbjct: 751 LPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG--- 807
Query: 413 HSAPP--PHRTLVPSTGRPRHPA 475
PP P R PS G P PA
Sbjct: 808 -MYPPLIPTRVPTPSNGAPEIPA 829
>U42436-3|AAL02471.1| 498|Caenorhabditis elegans Hypothetical
protein C49H3.6b protein.
Length = 498
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +1
Query: 301 AIGPPSPAPTPMLRWAGSATGDFFPLSSPRLVRGAPEPQRTTTPQ 435
A+ PAP P+ R SAT FP RL R P T P+
Sbjct: 351 AVNRQQPAPPPVARLPNSAT---FPTEKSRLPRAPPPAVTTPVPR 392
>U42436-2|AAL02470.2| 552|Caenorhabditis elegans Hypothetical
protein C49H3.6a protein.
Length = 552
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +1
Query: 301 AIGPPSPAPTPMLRWAGSATGDFFPLSSPRLVRGAPEPQRTTTPQ 435
A+ PAP P+ R SAT FP RL R P T P+
Sbjct: 351 AVNRQQPAPPPVARLPNSAT---FPTEKSRLPRAPPPAVTTPVPR 392
>AL132863-1|CAB60573.1| 477|Caenorhabditis elegans Hypothetical
protein Y37H2A.1 protein.
Length = 477
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 569 PHDFLLGFIGMPGFFIKPRVFLVPDGG 649
P+ F F G+ FIKP +F+V DGG
Sbjct: 211 PYGFPKSFYGVIANFIKPSLFVVNDGG 237
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Frame = +2
Query: 326 PPQCYVGRDLPPGTSSPSHLHDS*GAHQS--HSAPPPHRTLVPSTGRPRHPAIDGP 487
PP PPG PS L GA H + PPHR + RPR + P
Sbjct: 60 PPPAPRPSGQPPGPQGPSDLPGPSGAPPGPPHPSGPPHRPHPHPSRRPRPTRLPRP 115
>AF000195-2|AAC24267.1| 316|Caenorhabditis elegans Hypothetical
protein C32F10.4 protein.
Length = 316
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +1
Query: 382 SPRLVRGAPEPQRTTTPQDLSAEHRAPPXPSNRRPLAGAGWGLSARTTRSAFTA 543
+P G P P R T + APP P+ ++P+ SA T +F +
Sbjct: 209 TPMSPSGMPPPPRYTAYAPPMSSQTAPPIPTKQQPVDSESSTTSASTRSGSFVS 262
>Z99942-1|CAB17068.2| 454|Caenorhabditis elegans Hypothetical
protein H13N06.2 protein.
Length = 454
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 353 LPPGTSSPSHLHDS*GAHQSHSAPPPHRTLVPSTGRP 463
+PPGTS+PS + H PP ++ S+G P
Sbjct: 83 MPPGTSTPSLSSAENSGNGPHPPAPPPQSSAESSGLP 119
>AF026210-5|AAB71287.1| 632|Caenorhabditis elegans Hypothetical
protein F48A11.5a protein.
Length = 632
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1
Query: 124 TSSSFFHRRRGVRHNPVRPPS 62
+SS+ F RRG R NPV PP+
Sbjct: 162 SSSASFSSRRGTRANPVPPPN 182
>AF026210-4|AAT81192.1| 627|Caenorhabditis elegans Hypothetical
protein F48A11.5b protein.
Length = 627
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1
Query: 124 TSSSFFHRRRGVRHNPVRPPS 62
+SS+ F RRG R NPV PP+
Sbjct: 157 SSSASFSSRRGTRANPVPPPN 177
>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical protein
C10C6.1 protein.
Length = 1565
Score = 28.3 bits (60), Expect = 6.5
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 6/86 (6%)
Frame = +3
Query: 279 TQVPPCARHRPAFAGSHPNVTLGGICHRGLLPPLISTTREGRTRATA-----HHHPTGP* 443
T +P ++ A P+ + G+ R + I T R R+T+ HHHP
Sbjct: 1337 THLPGTSKISQQEASQEPSTSSQGMVRRSVNE--IETNRPSSLRSTSNSHHHHHHPAST- 1393
Query: 444 CRAPGAPXTQQSTAPGR-SRVGAFCP 518
AP T ST P SR+ + P
Sbjct: 1394 SSVASAPATLPSTTPSNLSRMASSSP 1419
>Z81586-4|CAB04688.2| 366|Caenorhabditis elegans Hypothetical
protein T05F1.5 protein.
Length = 366
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +2
Query: 257 PPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLPPGTSSPSHLHDS*GAHQSHSAPPP 430
PP+++SG P + + P P TSS + H+ G +Q H +P P
Sbjct: 40 PPIQISGKPASTAKPTSGSPQHHPQPIEQATTNPSVTSSLINQHNRVGNNQGHRSPSP 97
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 6.5
Identities = 21/62 (33%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = +1
Query: 310 PPSPAPTPMLRWAGSATGDFFPLSSPRL-VRGAPEPQR--TTTPQDLSAEHRAPPXPSNR 480
PP P P R GS+ P PR +P P+R T P R PP P R
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPR 181
Query: 481 RP 486
P
Sbjct: 182 NP 183
>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
protein.
Length = 1565
Score = 28.3 bits (60), Expect = 6.5
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 6/86 (6%)
Frame = +3
Query: 279 TQVPPCARHRPAFAGSHPNVTLGGICHRGLLPPLISTTREGRTRATA-----HHHPTGP* 443
T +P ++ A P+ + G+ R + I T R R+T+ HHHP
Sbjct: 1337 THLPGTSKISQQEASQEPSTSSQGMVRRSVNE--IETNRPSSLRSTSNSHHHHHHPAST- 1393
Query: 444 CRAPGAPXTQQSTAPGR-SRVGAFCP 518
AP T ST P SR+ + P
Sbjct: 1394 SSVASAPATLPSTTPSNLSRMASSSP 1419
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 23.4 bits (48), Expect(2) = 7.3
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 326 PPQCYVGRDLPPGTSSPSHLHDS*GAHQSHSAPPPH 433
PP ++GR +PP P H G + PPPH
Sbjct: 307 PPPHFMGRGMPPPFMPPPP-HFGMGPPRGF-MPPPH 340
Score = 23.0 bits (47), Expect(2) = 7.3
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +2
Query: 551 RGPRPPPHDFLLGFIGMPGFFIKPRV-FLVPDGGWTSIGVVVS 676
RG PPPH + P FF P F+ P T G +++
Sbjct: 333 RGFMPPPHPMMFRGGPYPPFFPPPPPHFMRPSSPPTDGGPIIT 375
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 23.4 bits (48), Expect(2) = 7.3
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 326 PPQCYVGRDLPPGTSSPSHLHDS*GAHQSHSAPPPH 433
PP ++GR +PP P H G + PPPH
Sbjct: 307 PPPHFMGRGMPPPFMPPPP-HFGMGPPRGF-MPPPH 340
Score = 23.0 bits (47), Expect(2) = 7.3
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +2
Query: 551 RGPRPPPHDFLLGFIGMPGFFIKPRV-FLVPDGGWTSIGVVVS 676
RG PPPH + P FF P F+ P T G +++
Sbjct: 333 RGFMPPPHPMMFRGGPYPPFFPPPPPHFMRPSSPPTDGGPIIT 375
>AL032637-11|CAA21622.3| 1119|Caenorhabditis elegans Hypothetical
protein Y43F8C.12 protein.
Length = 1119
Score = 27.9 bits (59), Expect = 8.6
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -2
Query: 399 PHES-WR*EGEE-VPGGRSRPT*HWGGSRRRRAYGAHMAVPGSPLSRSGGARWGLVGSR* 226
P+E+ WR EG E PG SR + G R G + + + G + G+VG
Sbjct: 854 PNEAPWRIEGREPAPGWPSRGVVKFDGYSTRYREGLDLVLHDISADVAAGEKIGIVGRTG 913
Query: 225 AGR 217
AG+
Sbjct: 914 AGK 916
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,525,229
Number of Sequences: 27780
Number of extensions: 417193
Number of successful extensions: 1560
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1545
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -