Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_J02
         (890 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069485-1|AAL39630.1|  401|Drosophila melanogaster LD21756p pro...   184   1e-46
AE014297-4196|AAG22173.1|  401|Drosophila melanogaster CG5502-PA...   184   1e-46
X13382-1|CAA31759.1|  407|Drosophila melanogaster protein ( Dros...   183   3e-46
AY070560-1|AAL48031.1|  712|Drosophila melanogaster LD33051p pro...    35   0.13 
AF173549-1|AAL29184.1|  712|Drosophila melanogaster mystery 45A ...    35   0.13 
AE013599-787|AAF58986.2|  712|Drosophila melanogaster CG8070-PA ...    35   0.13 
BT021245-1|AAX33393.1| 1823|Drosophila melanogaster RE64082p pro...    31   2.8  
AF243382-1|AAF68440.1| 1548|Drosophila melanogaster cytoplasmic ...    31   2.8  
AE014296-703|AAF47799.2| 1818|Drosophila melanogaster CG10847-PB...    31   2.8  
AE014296-702|AAS64963.1| 1823|Drosophila melanogaster CG10847-PA...    31   2.8  
BT011445-1|AAR99103.1| 1514|Drosophila melanogaster RE48314p pro...    30   4.9  
AY089218-1|AAL89956.1|  305|Drosophila melanogaster AT01821p pro...    30   4.9  
AY061099-1|AAL28647.1|  743|Drosophila melanogaster LD08841p pro...    30   4.9  
AF247766-1|AAF86226.1| 1514|Drosophila melanogaster Toll-6 protein.    30   4.9  
AF045470-1|AAF18568.1|  305|Drosophila melanogaster Gom protein.       30   4.9  
AE014296-2500|AAF49645.1| 1514|Drosophila melanogaster CG7250-PA...    30   4.9  
AE013599-3345|AAF46808.2|  305|Drosophila melanogaster CG6727-PA...    30   4.9  

>AY069485-1|AAL39630.1|  401|Drosophila melanogaster LD21756p
           protein.
          Length = 401

 Score =  184 bits (448), Expect = 1e-46
 Identities = 90/159 (56%), Positives = 109/159 (68%)
 Frame = -2

Query: 829 RNXPXVEXXNVNKXTXLKLXXGGHFGRXVIWTQSAFGRXDPLFGSWKTPSKQKKNFNLPQ 650
           RN P +E  NV+K   LKL  GGH GR VIWT+SAF R + LFG+WK PS  KK +NLPQ
Sbjct: 225 RNIPGIETINVDKLNLLKLAPGGHVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNLPQ 284

Query: 649 PKMANTDLTRXFKSDEIRKXLRAPNKRVIRATRKLNPLTNXKAMLKLNPYAAVLKRKAIL 470
           PKMANTDL+R  KS+EIRK LR P KRV R+ R+LNPLTN + ++KLNPYA VLKR+A L
Sbjct: 285 PKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAAL 344

Query: 469 ELRRRKNLKALADAEKSGLKLFKRNPAMKAEKLRERRRK 353
              +R   K LA A+K  ++L K + A  A K    R K
Sbjct: 345 AAEKRTVAKVLAKAKKQNVELAKSHFANVATKAAANRAK 383


>AE014297-4196|AAG22173.1|  401|Drosophila melanogaster CG5502-PA
           protein.
          Length = 401

 Score =  184 bits (448), Expect = 1e-46
 Identities = 90/159 (56%), Positives = 109/159 (68%)
 Frame = -2

Query: 829 RNXPXVEXXNVNKXTXLKLXXGGHFGRXVIWTQSAFGRXDPLFGSWKTPSKQKKNFNLPQ 650
           RN P +E  NV+K   LKL  GGH GR VIWT+SAF R + LFG+WK PS  KK +NLPQ
Sbjct: 225 RNIPGIETINVDKLNLLKLAPGGHVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNLPQ 284

Query: 649 PKMANTDLTRXFKSDEIRKXLRAPNKRVIRATRKLNPLTNXKAMLKLNPYAAVLKRKAIL 470
           PKMANTDL+R  KS+EIRK LR P KRV R+ R+LNPLTN + ++KLNPYA VLKR+A L
Sbjct: 285 PKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAAL 344

Query: 469 ELRRRKNLKALADAEKSGLKLFKRNPAMKAEKLRERRRK 353
              +R   K LA A+K  ++L K + A  A K    R K
Sbjct: 345 AAEKRTVAKVLAKAKKQNVELAKSHFANVATKAAANRAK 383


>X13382-1|CAA31759.1|  407|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for put. ribosomal protein
           L1. ).
          Length = 407

 Score =  183 bits (446), Expect = 3e-46
 Identities = 89/154 (57%), Positives = 108/154 (70%)
 Frame = -2

Query: 829 RNXPXVEXXNVNKXTXLKLXXGGHFGRXVIWTQSAFGRXDPLFGSWKTPSKQKKNFNLPQ 650
           RN P +E  NV+K   LKL  GGH GR VIWT+SAF R + LFG+WK PS  KK +NLPQ
Sbjct: 225 RNIPGIETINVDKLNVLKLAPGGHVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNLPQ 284

Query: 649 PKMANTDLTRXFKSDEIRKXLRAPNKRVIRATRKLNPLTNXKAMLKLNPYAAVLKRKAIL 470
           PKMANTDL+R  KS+EIRK LR P KRV R+ R+LNPLTN + ++KLNPYA VLKR+A L
Sbjct: 285 PKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAAL 344

Query: 469 ELRRRKNLKALADAEKSGLKLFKRNPAMKAEKLR 368
              +R   K LA A+K  ++L K + A  A K R
Sbjct: 345 AAEKRTVAKVLAKAKKQNVELAKSHFANVATKAR 378


>AY070560-1|AAL48031.1|  712|Drosophila melanogaster LD33051p
           protein.
          Length = 712

 Score = 35.1 bits (77), Expect = 0.13
 Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
 Frame = -2

Query: 679 KQKKNFNLPQPKMANTDL--TRXFKSDEIRKXLRAPNKRVIRATRKLNPLTNXKA-MLKL 509
           K+KK+  +   K A  +L  TR F  ++ ++   A  K+ + + RK  PL   +A  +KL
Sbjct: 566 KEKKDMRILNQKEAAQELALTRIFTDEDFKRINAANLKKTVTSARK-RPLEQDRAEFVKL 624

Query: 508 NPYAAVLKRKAILELRRRKNLKA-LADAEKSGLKLFKRNPAMKAEKLRERRRKN 350
           N    + K++   +  R + ++A   D E+ G K  + N         +R+ KN
Sbjct: 625 NSIEMIYKKRKHDKESRLETVQAGRQDRERFGWKDGRVNEHCSKTNREKRKTKN 678


>AF173549-1|AAL29184.1|  712|Drosophila melanogaster mystery 45A
           protein.
          Length = 712

 Score = 35.1 bits (77), Expect = 0.13
 Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
 Frame = -2

Query: 679 KQKKNFNLPQPKMANTDL--TRXFKSDEIRKXLRAPNKRVIRATRKLNPLTNXKA-MLKL 509
           K+KK+  +   K A  +L  TR F  ++ ++   A  K+ + + RK  PL   +A  +KL
Sbjct: 566 KEKKDMRILNQKEAAQELALTRIFTDEDFKRINAANLKKTVTSARK-RPLEQDRAEFVKL 624

Query: 508 NPYAAVLKRKAILELRRRKNLKA-LADAEKSGLKLFKRNPAMKAEKLRERRRKN 350
           N    + K++   +  R + ++A   D E+ G K  + N         +R+ KN
Sbjct: 625 NSIEMIYKKRKHDKESRLETVQAGRQDRERFGWKDGRVNEHCSKTNREKRKTKN 678


>AE013599-787|AAF58986.2|  712|Drosophila melanogaster CG8070-PA
           protein.
          Length = 712

 Score = 35.1 bits (77), Expect = 0.13
 Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
 Frame = -2

Query: 679 KQKKNFNLPQPKMANTDL--TRXFKSDEIRKXLRAPNKRVIRATRKLNPLTNXKA-MLKL 509
           K+KK+  +   K A  +L  TR F  ++ ++   A  K+ + + RK  PL   +A  +KL
Sbjct: 566 KEKKDMRILNQKEAAQELALTRIFTDEDFKRINAANLKKTVTSARK-RPLEQDRAEFVKL 624

Query: 508 NPYAAVLKRKAILELRRRKNLKA-LADAEKSGLKLFKRNPAMKAEKLRERRRKN 350
           N    + K++   +  R + ++A   D E+ G K  + N         +R+ KN
Sbjct: 625 NSIEMIYKKRKHDKESRLETVQAGRQDRERFGWKDGRVNEHCSKTNREKRKTKN 678


>BT021245-1|AAX33393.1| 1823|Drosophila melanogaster RE64082p
           protein.
          Length = 1823

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = -2

Query: 730 SAFGRXDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRXFKSDEIRKXLRA 581
           S  G  +  +G W+   +Q+K    P+PK  N  + +   S E R  +R+
Sbjct: 588 SGGGGDEECYGGWEQQQQQQKQSQPPRPKRPNGKMLQMQNSTESRDGMRS 637


>AF243382-1|AAF68440.1| 1548|Drosophila melanogaster cytoplasmic
           protein encore protein.
          Length = 1548

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = -2

Query: 730 SAFGRXDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRXFKSDEIRKXLRA 581
           S  G  +  +G W+   +Q+K    P+PK  N  + +   S E R  +R+
Sbjct: 439 SGGGGDEECYGGWEQQQQQQKQSQPPRPKRPNGKMLQMQNSTESRDGMRS 488


>AE014296-703|AAF47799.2| 1818|Drosophila melanogaster CG10847-PB,
           isoform B protein.
          Length = 1818

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = -2

Query: 730 SAFGRXDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRXFKSDEIRKXLRA 581
           S  G  +  +G W+   +Q+K    P+PK  N  + +   S E R  +R+
Sbjct: 583 SGGGGDEECYGGWEQQQQQQKQSQPPRPKRPNGKMLQMQNSTESRDGMRS 632


>AE014296-702|AAS64963.1| 1823|Drosophila melanogaster CG10847-PA,
           isoform A protein.
          Length = 1823

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = -2

Query: 730 SAFGRXDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRXFKSDEIRKXLRA 581
           S  G  +  +G W+   +Q+K    P+PK  N  + +   S E R  +R+
Sbjct: 588 SGGGGDEECYGGWEQQQQQQKQSQPPRPKRPNGKMLQMQNSTESRDGMRS 637


>BT011445-1|AAR99103.1| 1514|Drosophila melanogaster RE48314p protein.
          Length = 1514

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -3

Query: 696  HGRHHRNKRRTSTCPSQRWPTLTSHVFSSLMRSGXSSVLP 577
            +GR + NKR  S C S R P++  +  S   ++G   V+P
Sbjct: 1248 NGRGNNNKRVVSGCLSGRTPSVNMYATSHEYQAGNGGVIP 1287


>AY089218-1|AAL89956.1|  305|Drosophila melanogaster AT01821p
           protein.
          Length = 305

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -2

Query: 514 KLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLFKRNPAMKAEKLRERRRK 353
           +L+    +   +   EL  +  LK L + EK   K+ K    +KAE+ +ER +K
Sbjct: 204 ELDELQRLAAEREAFELWEKDELKRLEEQEKEREKIRKEKAKVKAERDKEREKK 257


>AY061099-1|AAL28647.1|  743|Drosophila melanogaster LD08841p
           protein.
          Length = 743

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -3

Query: 696 HGRHHRNKRRTSTCPSQRWPTLTSHVFSSLMRSGXSSVLP 577
           +GR + NKR  S C S R P++  +  S   ++G   V+P
Sbjct: 477 NGRGNNNKRVVSGCLSGRTPSVNMYATSHEYQAGNGGVIP 516


>AF247766-1|AAF86226.1| 1514|Drosophila melanogaster Toll-6 protein.
          Length = 1514

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -3

Query: 696  HGRHHRNKRRTSTCPSQRWPTLTSHVFSSLMRSGXSSVLP 577
            +GR + NKR  S C S R P++  +  S   ++G   V+P
Sbjct: 1248 NGRGNNNKRVVSGCLSGRTPSVNMYATSHEYQAGNGGVIP 1287


>AF045470-1|AAF18568.1|  305|Drosophila melanogaster Gom protein.
          Length = 305

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -2

Query: 514 KLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLFKRNPAMKAEKLRERRRK 353
           +L+    +   +   EL  +  LK L + EK   K+ K    +KAE+ +ER +K
Sbjct: 204 ELDELQRLAAEREAFELWEKDELKRLEEQEKEREKIRKEKAKVKAERDKEREKK 257


>AE014296-2500|AAF49645.1| 1514|Drosophila melanogaster CG7250-PA
            protein.
          Length = 1514

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -3

Query: 696  HGRHHRNKRRTSTCPSQRWPTLTSHVFSSLMRSGXSSVLP 577
            +GR + NKR  S C S R P++  +  S   ++G   V+P
Sbjct: 1248 NGRGNNNKRVVSGCLSGRTPSVNMYATSHEYQAGNGGVIP 1287


>AE013599-3345|AAF46808.2|  305|Drosophila melanogaster CG6727-PA
           protein.
          Length = 305

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -2

Query: 514 KLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLFKRNPAMKAEKLRERRRK 353
           +L+    +   +   EL  +  LK L + EK   K+ K    +KAE+ +ER +K
Sbjct: 204 ELDELQRLAAEREAFELWEKDELKRLEEQEKEREKIRKEKAKVKAERDKEREKK 257


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,855,239
Number of Sequences: 53049
Number of extensions: 424133
Number of successful extensions: 1533
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1533
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)