Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_J02
         (890 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    24   1.6  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   2.8  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    23   3.7  
AJ876408-1|CAI45289.1|   52|Apis mellifera putative diuretic hor...    23   4.9  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   8.6  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -2

Query: 658 LPQPKMANTDLTRXFKSDEIRKXLRAPNKRV 566
           LP P   N  L     S E+R+  +APN  V
Sbjct: 490 LPPPYRLNKPLMSLITSSEVRQPGKAPNYSV 520


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 739 WTQSAFGRXDPLFGSWKTPSKQKKNFNLP 653
           WT ++     P  G +KT SK    F+LP
Sbjct: 32  WTATSHEASAPAEGKFKTVSKVPGPFSLP 60


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 766 GGHFGRXVIWTQSAFGRXDP 707
           GG F R +IWT + +   +P
Sbjct: 89  GGQFVRDLIWTPTVYVSNEP 108


>AJ876408-1|CAI45289.1|   52|Apis mellifera putative diuretic
           hormone-I protein.
          Length = 52

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -2

Query: 493 VLKRKAILELRRRKNLKALADAE 425
           VL+++ +LEL RRK L+  A  +
Sbjct: 19  VLRQRVLLELARRKALQDQAQID 41


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 812 HTGXVAXGPIKPDLVEN 862
           H G V  GP  P LVE+
Sbjct: 150 HQGSVLDGPDSPPLVES 166


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,583
Number of Sequences: 438
Number of extensions: 2346
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)