Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_I19
         (764 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_07_0010 + 11772455-11772925                                         29   3.1  
05_05_0155 + 22787658-22787930,22788029-22788096,22789600-227899...    29   4.1  
03_04_0023 + 16537257-16537272,16537515-16537929,16538404-165384...    29   5.4  
12_02_0168 + 14827529-14828050                                         28   9.4  

>10_07_0010 + 11772455-11772925
          Length = 156

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = -2

Query: 607 AEPGPWRGGSSRWQCSRCLSGDAPRH-TRW 521
           A PG   GG+ RW+C    S    RH  RW
Sbjct: 15  AAPGSVEGGAGRWRCRSGRSAPGGRHRARW 44


>05_05_0155 +
           22787658-22787930,22788029-22788096,22789600-22789915,
           22790207-22790323
          Length = 257

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/35 (42%), Positives = 15/35 (42%)
 Frame = +3

Query: 540 ASPERHLEHCHRELPPRHGPGSAXHWTEPSHPTXP 644
           A P  HL H H   PP H P    H   P HP  P
Sbjct: 25  APPPPHLRHPHHH-PPHHHP-HPPHHHPPHHPHPP 57


>03_04_0023 +
           16537257-16537272,16537515-16537929,16538404-16538466,
           16538604-16538607
          Length = 165

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +3

Query: 543 SPERHLEHCH-RELPPRHGPGSAXHWTEPSH 632
           +P++HL   H +E PP HG G       P+H
Sbjct: 23  TPQQHLHAGHAQEQPPGHGHGQVQRHEHPAH 53


>12_02_0168 + 14827529-14828050
          Length = 173

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = -2

Query: 655 MFESGXVGXDGSVQCXAEPGPWRGGSSRWQCSRCLSG-DAPRHTRW 521
           M +S   G  GSV+  A PG   GG+ RW+C    S     R  RW
Sbjct: 1   MEDSPEDGRWGSVE--AAPGSVDGGAGRWRCRSGRSAPGGRRRARW 44


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,879,673
Number of Sequences: 37544
Number of extensions: 205854
Number of successful extensions: 739
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)