Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_I10
         (773 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    29   0.064
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       25   1.0  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    24   1.4  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    24   1.8  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   4.2  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    23   4.2  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    21   9.6  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    21   9.6  

>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 28.7 bits (61), Expect = 0.064
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -3

Query: 552 KDCTPRYGDVCKYEILTDRSQPFTINVEGVIRNTEPLDYEKSH 424
           KDC+   G V  Y+I  D+     I   G+I NT+P+   K H
Sbjct: 120 KDCS---GIVSAYKIAIDKFDRLWILDSGIINNTQPMCSPKLH 159


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -3

Query: 447 PLDYEKSHNHILSVVAYDCGMMQSTPVMVTIKVNKPCR 334
           P+D   +  HI+S+V Y   M+ S     T+ +   CR
Sbjct: 28  PIDMRFNEGHIVSIVFYSVLMIISAIGNTTVLILITCR 65


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 408 PIGCGCETSRSQVALC 455
           PIGC C+T  S+   C
Sbjct: 432 PIGCECKTCNSKTKCC 447


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 281 RWPYSPPHVWK 249
           R+PY PP  WK
Sbjct: 216 RFPYQPPFAWK 226


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 552 KDCTPRYGDVCKYEIL 505
           KD   RYG +CK E L
Sbjct: 84  KDLNQRYGALCKEEAL 99


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -3

Query: 483 TINVEGVIRNTEPLDYEK 430
           TIN++  ++N E LD++K
Sbjct: 93  TINIDVTLQNDEVLDWKK 110


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 303 LHVPPLLSIPLYRAC 347
           +H PPL  +PL+  C
Sbjct: 436 IHGPPLPPLPLHTEC 450


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 303 LHVPPLLSIPLYRAC 347
           +H PPL  +PL+  C
Sbjct: 436 IHGPPLPPLPLHTEC 450


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,938
Number of Sequences: 438
Number of extensions: 4746
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)