Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_I05
(781 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc... 81 2e-16
SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomy... 80 3e-16
SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc... 75 1e-14
SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc... 72 8e-14
SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy... 61 2e-10
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 55 1e-08
SPBC215.11c |||aldo/keto reductase, unknown biological role|Schi... 40 5e-04
SPAC9E9.11 |plr1|plr|pyridoxal reductase |Schizosaccharomyces po... 36 0.005
SPCC1281.04 |||pyridoxal reductase |Schizosaccharomyces pombe|ch... 33 0.035
SPBC26H8.02c |sec9||SNAP-25 homologue, t-SNARE component Sec9|Sc... 28 1.3
SPBP23A10.13 |orc4|orp4|origin recognition complex subunit Orc4|... 28 1.7
SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyce... 28 1.7
SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr 3|||Ma... 27 3.0
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 27 3.0
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 26 7.0
SPAC8F11.03 |msh3|swi4|MutS protein homolog 3|Schizosaccharomyce... 26 7.0
SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA polymerase|Sc... 26 7.0
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 25 9.2
SPCC1322.02 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 25 9.2
>SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 275
Score = 81.0 bits (191), Expect = 2e-16
Identities = 43/134 (32%), Positives = 79/134 (58%), Gaps = 1/134 (0%)
Frame = -1
Query: 667 GLTKSIGVSNFNIQQL-ERLKSEGGVTPSVLQVEINLNLQRSALLDYCKAQGIVVVAYTP 491
G ++IGVSNF + E L S + P V Q+E++ + ++DYC+++GI + AY P
Sbjct: 131 GKLRAIGVSNFGPHHIQELLDSHPKIIPCVNQIELHPFCSQQKVVDYCESKGIQLAAYAP 190
Query: 490 FGNLFNRQPSAPAPRADDQRLVAIAQKYKKTVPQIVLRYLVELGVIPIPKSLHKDRVEEN 311
+ + +++L+AIA KY K+ QI++RY ++ G I +PKS R++EN
Sbjct: 191 LVH---------GEKFGNKQLLAIASKYNKSEAQIMIRYCLQRGFIVLPKSSTPRRIKEN 241
Query: 310 IQIYDFSLTPDEIQ 269
++DF ++ ++++
Sbjct: 242 GDVFDFEISKEDME 255
>SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 276
Score = 80.2 bits (189), Expect = 3e-16
Identities = 49/147 (33%), Positives = 76/147 (51%)
Frame = -1
Query: 667 GLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQRSALLDYCKAQGIVVVAYTPF 488
G IGVSN+NI LE + S G P++ QVE + R L YC GI+V A++P
Sbjct: 132 GRINKIGVSNYNIHHLEEIISLGLPLPAINQVEFSAFNNRPTFLSYCFNHGILVQAFSPL 191
Query: 487 GNLFNRQPSAPAPRADDQRLVAIAQKYKKTVPQIVLRYLVELGVIPIPKSLHKDRVEENI 308
+ R D RL+ ++ KY KT I+LRY ++ GV PI K+ + EN+
Sbjct: 192 TRGY---------RLSDIRLLDLSLKYNKTPANILLRYCLQKGVSPIFKASSFVHIHENV 242
Query: 307 QIYDFSLTPDEIQLXEEFRQWLQDFIA 227
+ F L P ++ + + W ++F++
Sbjct: 243 KAEQFMLDPSDMDVMD---TWDEEFVS 266
>SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 74.9 bits (176), Expect = 1e-14
Identities = 41/139 (29%), Positives = 79/139 (56%), Gaps = 1/139 (0%)
Frame = -1
Query: 667 GLTKSIGVSNFNIQQLERL-KSEGGVTPSVLQVEINLNLQRSALLDYCKAQGIVVVAYTP 491
G +S+GVSN+ ++ L+ L S P V Q+E++ L + ++ YC++ I + AY+P
Sbjct: 138 GDIRSVGVSNYGVKHLQELYASNPKFYPCVNQIELHPFLSQDDIVKYCQSHDIAIEAYSP 197
Query: 490 FGNLFNRQPSAPAPRADDQRLVAIAQKYKKTVPQIVLRYLVELGVIPIPKSLHKDRVEEN 311
+ R +D++LV IA+K +V Q+++R+ ++ G IPI KS K+ + +
Sbjct: 198 LTH---------GIRLNDEKLVPIAKKLNISVAQLLIRWSLQKGYIPIIKSTKKEHMLSD 248
Query: 310 IQIYDFSLTPDEIQLXEEF 254
+ +++F++ D +Q F
Sbjct: 249 LDVFNFTIPDDVVQELSSF 267
>SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde
reductase AKR3C2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 284
Score = 72.1 bits (169), Expect = 8e-14
Identities = 44/134 (32%), Positives = 73/134 (54%), Gaps = 2/134 (1%)
Frame = -1
Query: 667 GLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQRSA--LLDYCKAQGIVVVAYT 494
GL S+GVSNF I LE L +TP V Q+E + + ++A L+++C+++GI+V Y
Sbjct: 135 GLVHSVGVSNFRIPDLEELLKTSTITPRVNQIEFHPQVYKAAKPLVEFCQSKGIIVEGYG 194
Query: 493 PFGNLFNRQPSAPAPRADDQRLVAIAQKYKKTVPQIVLRYLVELGVIPIPKSLHKDRVEE 314
P L A P A+ + ++ KY + QI+L++ GVIPI + +R++E
Sbjct: 195 PLSPLVR---DAQGPVAEFTK--SLESKYHVSDTQILLKWAYSKGVIPITTTSKIERMKE 249
Query: 313 NIQIYDFSLTPDEI 272
+ F+L +I
Sbjct: 250 CLNFDSFTLDKADI 263
>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 321
Score = 60.9 bits (141), Expect = 2e-10
Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
Frame = -1
Query: 667 GLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQRSALLDYCKAQGIVVVAYTPF 488
G + IG+SNFN LER+ V P+V Q+E++ L ++ ++ K GI V AY+PF
Sbjct: 159 GKVRHIGLSNFNDTNLERILKVAKVKPAVHQMELHPFLPQTEFVEKHKKLGIHVTAYSPF 218
Query: 487 GNLFNRQPSAPAPRADDQRLVAIAQKYK---KTVPQIVLRYLVELGVIPIPKSLHKDRVE 317
GN N + P+ + + K K T I + + + G IPKS+++ R++
Sbjct: 219 GNQ-NTIYESKIPKLIEHETIQKIAKSKGEGVTGATIAVSWAITRGTSVIPKSVNEQRIK 277
Query: 316 ENIQ 305
N +
Sbjct: 278 SNFK 281
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 55.2 bits (127), Expect = 1e-08
Identities = 40/135 (29%), Positives = 70/135 (51%), Gaps = 2/135 (1%)
Frame = -1
Query: 667 GLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQRSALLDYCKAQGIVVVAYTPF 488
G + IG+SNFN + L+R+ V P++ Q+E++ L ++ L+ K I V AY+P
Sbjct: 158 GKVRYIGISNFNNEYLDRVLKIAKVKPTIHQMELHPYLPQTEYLEKHKKLQIHVSAYSPL 217
Query: 487 GNLFNRQPSAPAPRADDQRLVAIAQKYKK--TVPQIVLRYLVELGVIPIPKSLHKDRVEE 314
N + S + + + LV IA + T I + + V+ G +PKS+++ R+
Sbjct: 218 ANQNDAYNSDISKLIEHKTLVDIANARGEGITPANIAISWAVKRGTSVLPKSVNESRIVS 277
Query: 313 NIQIYDFSLTPDEIQ 269
N +Y LT E++
Sbjct: 278 NF-LY-IPLTDKEME 290
Score = 28.7 bits (61), Expect = 0.99
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 11/47 (23%)
Frame = -3
Query: 773 DLYLIHWPIA---------XHENASISQTD--*RETWQAMTDVLNQG 666
D YLIHWP A +E + D ETWQAM ++L G
Sbjct: 112 DAYLIHWPFALLSGPEELPRNEKGELIYEDVPIEETWQAMEELLETG 158
>SPBC215.11c |||aldo/keto reductase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 306
Score = 39.5 bits (88), Expect = 5e-04
Identities = 29/139 (20%), Positives = 65/139 (46%), Gaps = 2/139 (1%)
Frame = -1
Query: 667 GLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQRSALLDYCKAQGIVVVAYTPF 488
GL + +G+S + ++ + V SV + +N + +L+YC+ +GI + + P
Sbjct: 159 GLIRHVGLSEVTVDDIKEAEQYFPVV-SVQNLFNLVNRKNEKVLEYCEQKGIAFIPWYPL 217
Query: 487 GNLFNRQPSAPAPRADDQRLVAIAQKYKKTVPQIVLRYLVELG--VIPIPKSLHKDRVEE 314
+ +P L A+++ ++ QI L ++++ ++PIP + D +EE
Sbjct: 218 ASGALAKPGTI--------LDAVSKDLDRSTSQIALSWVLQRSPVMLPIPGTSKVDHLEE 269
Query: 313 NIQIYDFSLTPDEIQLXEE 257
N++ L+ + +E
Sbjct: 270 NVKAAGIQLSSEVFAKLDE 288
>SPAC9E9.11 |plr1|plr|pyridoxal reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 333
Score = 36.3 bits (80), Expect = 0.005
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Frame = -1
Query: 436 QRLVAIAQKYKKTVPQIVLRYLVELG---VIPIPKSLHKDRVEENIQIYDFSLTPDEIQL 266
Q + +A+K+ T+P+ L +++ G VIPIP S R + N+ + SL+P++ +
Sbjct: 249 QAVEQLAKKFGMTMPEFSLLFIMASGNGLVIPIPGSTSVSRTKSNLNALNKSLSPEQFKE 308
Query: 265 XEE 257
+E
Sbjct: 309 AKE 311
>SPCC1281.04 |||pyridoxal reductase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 333
Score = 33.5 bits (73), Expect = 0.035
Identities = 38/165 (23%), Positives = 75/165 (45%), Gaps = 32/165 (19%)
Frame = -1
Query: 667 GLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINL---NLQRSALLDYCKAQGIVVVAY 497
G +G+S + + ++R + V + ++ E +L +++++ +LD C I ++AY
Sbjct: 145 GEISCVGLSEASAESIKRALAI--VPIAAVETEYSLFSRDIEKNGILDTCTQLSIPIIAY 202
Query: 496 TPF--GNLFNRQPSA----------PAPRADD--------------QRLVAIAQKYKKTV 395
PF G L R +A P R D + + +AQK+ ++
Sbjct: 203 APFCHGLLTGRVKTAEDLKDFIKAFPFLRNMDKFNPKVFEKNIPFLKAVEQLAQKFGMSM 262
Query: 394 PQIVLRYLVELG---VIPIPKSLHKDRVEENIQIYDFSLTPDEIQ 269
P+ L +++ G +IPIP S R E N+ SL+ ++++
Sbjct: 263 PEFALNFIIANGKGMIIPIPGSTTVQRAESNLSALKKSLSSEQLE 307
>SPBC26H8.02c |sec9||SNAP-25 homologue, t-SNARE component
Sec9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 419
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = -3
Query: 494 PLRQSVQPPAVGSSAAGRRPASRGHRPKIQENRSANRTQIFGGVRSNSDPE 342
P + PP S+A RP+ P Q+ + ++F G R +D E
Sbjct: 114 PYARKDMPPMKSSAAVTERPSMHRSAPS-QDTLDLKKQELFAGARIQNDDE 163
>SPBP23A10.13 |orc4|orp4|origin recognition complex subunit
Orc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 972
Score = 27.9 bits (59), Expect = 1.7
Identities = 17/72 (23%), Positives = 35/72 (48%)
Frame = +2
Query: 407 VFLGDGHETLVVGPRRWSRRLAVEQIAEGGVRHHNYPLSLAVVQ*SRPLKVQIDLDLQDG 586
+ LG+G+ ++VGPR + + V+ I + N VV+ + + L L++
Sbjct: 570 IVLGEGNSVIIVGPRGSGKSVLVDDILSRAAQEINE--KSYVVRLNGTYQTDDKLALREI 627
Query: 587 GRDAALRLEPLQ 622
R ++ LE ++
Sbjct: 628 SRQLSIELESIE 639
>SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 747
Score = 27.9 bits (59), Expect = 1.7
Identities = 24/74 (32%), Positives = 35/74 (47%)
Frame = +2
Query: 224 KGDKVL*PLSKLFXQLNLVRSEGEVVDLNVLFNSVLVEGLRDRNYS*LHQISEYDLRNGF 403
K D + P+ L +NL+R E V LNV+ S +V + S + + EY N F
Sbjct: 552 KKDDRINPVRVLHVLINLLRDENSYVHLNVI--SAVVSLCDKYDDSLIRLLKEYTNTNKF 609
Query: 404 LVFLGDGHETLVVG 445
V ETL++G
Sbjct: 610 TV-----DETLLIG 618
>SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr
3|||Manual
Length = 462
Score = 27.1 bits (57), Expect = 3.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 330 LWRDFGIGITPNSTKYLSTICGTVFLYFWAMATRR 434
LW + GIGI P + + L T T + W + +RR
Sbjct: 397 LWAERGIGIGPKNQEELQTYV-TFWSNIWTLLSRR 430
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 331 KDRVEENIQIYDFSLTPDEIQLXEEFRQWLQD 236
K+ +E + F T +EIQ EEF++W ++
Sbjct: 1245 KEEIESQKRRSSFRKTIEEIQQEEEFQKWWEE 1276
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 2386
Score = 25.8 bits (54), Expect = 7.0
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 561 RLISTCRTEGVTPPSDLSLSSC*MLKLDTPMDLVRPLVQDIGHSLP 698
+LI+ C T + +SL L D P+DLV P + +LP
Sbjct: 1985 KLINLCNTRINSKSVKMSLKDHFRLSFDDPVDLVIPAKSFLDITLP 2030
>SPAC8F11.03 |msh3|swi4|MutS protein homolog 3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1004
Score = 25.8 bits (54), Expect = 7.0
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 26 VKLALINFMKL-SQTCLQQNQQKTILLHREVSGEVMTVSLACVDCII 163
VKLAL N S C+ K I LH E + ++S+ C+D I
Sbjct: 330 VKLALENLQDFFSSKCIMSGS-KIIELHMEKVKSLHSLSIICLDMAI 375
>SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA
polymerase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1120
Score = 25.8 bits (54), Expect = 7.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 221 NKGDKVL*PLSKLFXQLNLVRSEGEVVDL 307
NKGDK+L P+ L+ + + R E+ D+
Sbjct: 58 NKGDKILLPMINLYIREIIQRGSFELTDV 86
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -3
Query: 440 RPASRGHRPKIQENRSANRTQIFGGVRSNSDPEVPPQGQS 321
R +S H + NRS+N T+ G +SN + G+S
Sbjct: 17 RASSNTHLSREGTNRSSNVTRTVSGRKSNHGSSLTDTGES 56
>SPCC1322.02 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 351
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -1
Query: 418 AQKYKKTVPQIVLRYLVELGVIPIPKSLHKDRVEENIQIYDFS 290
AQ + + V + RY +++ P K+LH ++N I+DF+
Sbjct: 25 AQSFAEKVQRF--RYQMKVHAAPRQKTLHSFLKKDNANIHDFT 65
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,147,036
Number of Sequences: 5004
Number of extensions: 65871
Number of successful extensions: 214
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 207
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 377352472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -