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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_I05
         (781 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110482-1|CAB54385.1|  316|Caenorhabditis elegans Hypothetical ...    99   2e-21
AL110482-2|CAB60335.1|  316|Caenorhabditis elegans Hypothetical ...    99   4e-21
Z75553-1|CAA99947.2|  320|Caenorhabditis elegans Hypothetical pr...    97   2e-20
U80844-1|AAB37976.1|  317|Caenorhabditis elegans Hypothetical pr...    96   3e-20
U55368-5|AAA97992.2|  333|Caenorhabditis elegans Hypothetical pr...    93   3e-19
AL110482-3|CAB60336.1|  339|Caenorhabditis elegans Hypothetical ...    85   7e-17
Z81088-2|CAB03127.1|  297|Caenorhabditis elegans Hypothetical pr...    80   2e-15
U21308-3|AAB93322.2|  321|Caenorhabditis elegans Hypothetical pr...    79   3e-15
U21324-6|AAA62562.1|  287|Caenorhabditis elegans Hypothetical pr...    73   3e-13
U50068-4|AAB37733.1|  287|Caenorhabditis elegans Hypothetical pr...    60   2e-09
Z81088-3|CAB03128.1|  283|Caenorhabditis elegans Hypothetical pr...    54   9e-08
Z71181-2|CAA94895.1|  301|Caenorhabditis elegans Hypothetical pr...    47   2e-05
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p...    33   0.30 
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    31   0.92 
AF038613-11|AAB92054.2|  836|Caenorhabditis elegans Mammalian el...    29   4.9  
U23511-7|AAC46795.1|  435|Caenorhabditis elegans Hypothetical pr...    28   6.5  
AL132860-6|CAB60526.1|  373|Caenorhabditis elegans Hypothetical ...    28   6.5  
U41746-9|AAA83334.3|  559|Caenorhabditis elegans Groundhog (hedg...    28   8.6  
U39854-3|AAA81078.2|  263|Caenorhabditis elegans Hypothetical pr...    28   8.6  
AL034392-4|CAA22307.2|  203|Caenorhabditis elegans Hypothetical ...    28   8.6  
AF039716-7|AAB96735.3|  617|Caenorhabditis elegans Sodium:neurot...    28   8.6  

>AL110482-1|CAB54385.1|  316|Caenorhabditis elegans Hypothetical
           protein Y39G8B.1a protein.
          Length = 316

 Score =   99 bits (238), Expect = 2e-21
 Identities = 53/135 (39%), Positives = 82/135 (60%), Gaps = 3/135 (2%)
 Frame = -1

Query: 667 GLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQRSALLDYCKAQGIVVVAYTPF 488
           G  +SIG+SNF   Q++R+     V P+ LQVE++    +  L ++CK +GIVVV Y+P 
Sbjct: 152 GKCRSIGLSNFTHSQIQRVWDAAEVKPACLQVELHPYFTQVKLREFCKEKGIVVVGYSPL 211

Query: 487 GN---LFNRQPSAPAPRADDQRLVAIAQKYKKTVPQIVLRYLVELGVIPIPKSLHKDRVE 317
           GN    F R+   P    ++  +  IA+ + KT  QI+LR+ V+ G+  IPKS+   R+ 
Sbjct: 212 GNPGSAFFRKDGDPNVLTNEV-VAGIAKAHGKTPAQIILRWFVDSGLSAIPKSVTPQRIS 270

Query: 316 ENIQIYDFSLTPDEI 272
           EN+ ++DF LT +EI
Sbjct: 271 ENLAVFDFQLTAEEI 285


>AL110482-2|CAB60335.1|  316|Caenorhabditis elegans Hypothetical
           protein Y39G8B.1b protein.
          Length = 316

 Score = 98.7 bits (235), Expect = 4e-21
 Identities = 54/136 (39%), Positives = 82/136 (60%), Gaps = 3/136 (2%)
 Frame = -1

Query: 667 GLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQRSALLDYCKAQGIVVVAYTPF 488
           G  +SIG+SNF   Q++R+     V P+ LQVE++    +  L ++CK +GIVVV Y+P 
Sbjct: 152 GKCRSIGLSNFTHSQIQRVWDAAEVKPACLQVELHPYFTQVKLREFCKEKGIVVVGYSPL 211

Query: 487 GN---LFNRQPSAPAPRADDQRLVAIAQKYKKTVPQIVLRYLVELGVIPIPKSLHKDRVE 317
           GN    F R+   P    ++  +  IA+ + KT  QI+LR+ V+ G+  IPKS+   R+ 
Sbjct: 212 GNPGSAFFRKDGDPNVLTNEV-VAGIAKAHGKTPAQIILRWFVDSGLSAIPKSVTPQRII 270

Query: 316 ENIQIYDFSLTPDEIQ 269
           ENI + DF L+ +EIQ
Sbjct: 271 ENISVIDFQLSAEEIQ 286


>Z75553-1|CAA99947.2|  320|Caenorhabditis elegans Hypothetical
           protein ZC443.1 protein.
          Length = 320

 Score = 96.7 bits (230), Expect = 2e-20
 Identities = 57/156 (36%), Positives = 91/156 (58%), Gaps = 12/156 (7%)
 Frame = -1

Query: 667 GLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQRSALLDYCKAQGIVVVAYTPF 488
           GLTK+IGVSNFN  Q+ R+ +   V     Q+E++L L + A  + CK   I++ AY   
Sbjct: 145 GLTKAIGVSNFNESQIVRIMNIQKVPIHASQLELHLYLPQKAHRELCKKHNILITAYATL 204

Query: 487 GNL-------FNRQPSAPAPR-----ADDQRLVAIAQKYKKTVPQIVLRYLVELGVIPIP 344
           G+         N +P   + +      +D+ + A+AQKY KT  QI+LR  VE+G+I IP
Sbjct: 205 GSPGRMSVVGSNGRPLFESTQNSENEMNDKHVKALAQKYSKTPAQILLRATVEMGIIVIP 264

Query: 343 KSLHKDRVEENIQIYDFSLTPDEIQLXEEFRQWLQD 236
           K+ + +R++ENI I+DF+++  E+ L E   +  Q+
Sbjct: 265 KTTNPERMKENINIFDFNISNAEVNLLEAHERTKQE 300


>U80844-1|AAB37976.1|  317|Caenorhabditis elegans Hypothetical
           protein C07D8.6 protein.
          Length = 317

 Score = 95.9 bits (228), Expect = 3e-20
 Identities = 57/160 (35%), Positives = 91/160 (56%), Gaps = 14/160 (8%)
 Frame = -1

Query: 667 GLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQRSALLDYCKAQGIVVVAYTPF 488
           GL K++GVSN+N  Q+ R  + G       QVE++L   +   +D+CK   I V +Y   
Sbjct: 145 GLAKAVGVSNWNNDQISRALALGLTPVHNSQVELHLYFPQHDHVDFCKKHNISVTSYATL 204

Query: 487 GN---------LFNRQPSAPAPR-ADDQRLVAIAQKYKKTVPQIVLRYLVELGVIPIPKS 338
           G+            +   APAP    DQ ++A+A+K  KT  Q++LRY ++ G   +PKS
Sbjct: 205 GSPGRVNFTLPTGQKLDWAPAPSDLQDQNVLALAEKTHKTPAQVLLRYALDRGCAILPKS 264

Query: 337 LHKDRVEENIQIYDFSLTPDEIQLXEEF----RQWLQDFI 230
           + ++R++EN +++DFSLT ++I   EE     R +LQDF+
Sbjct: 265 IQENRIKENFEVFDFSLTEEDIAKLEESKNSQRLFLQDFM 304


>U55368-5|AAA97992.2|  333|Caenorhabditis elegans Hypothetical
           protein T08H10.1 protein.
          Length = 333

 Score = 92.7 bits (220), Expect = 3e-19
 Identities = 54/162 (33%), Positives = 82/162 (50%), Gaps = 5/162 (3%)
 Frame = -1

Query: 667 GLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQRSALLDYCKAQGIVVVAYTPF 488
           G  K++GVSNF+  QL+ L     V P+  QVE ++   +  L   CK  G+ V AY P 
Sbjct: 155 GKLKALGVSNFSCNQLQALYDAAEVKPANQQVECHIYWPQQELRALCKKLGVTVTAYAPL 214

Query: 487 GNLFNR--QPSAPAPRAD---DQRLVAIAQKYKKTVPQIVLRYLVELGVIPIPKSLHKDR 323
           G+   +  +P    P  D   +  +  +A KY KT  QI++R+L + G+  IPKS+  DR
Sbjct: 215 GSPGRKAARPDGVWPEGDPLLEPIVKQLAAKYHKTAAQILIRHLTQHGISTIPKSVSPDR 274

Query: 322 VEENIQIYDFSLTPDEIQLXEEFRQWLQDFIAFVLGSFSLFP 197
           + ENI  +DF L+ +++          + FIA        FP
Sbjct: 275 IVENISTFDFKLSDEDMHTLNSIETRTRLFIADFAVKHPFFP 316


>AL110482-3|CAB60336.1|  339|Caenorhabditis elegans Hypothetical
           protein Y39G8B.2 protein.
          Length = 339

 Score = 84.6 bits (200), Expect = 7e-17
 Identities = 46/135 (34%), Positives = 82/135 (60%), Gaps = 3/135 (2%)
 Frame = -1

Query: 667 GLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQRSALLDYCKAQGIVVVAYTPF 488
           G  +SIG++NFNI Q+E++ ++G + P+VLQVE+N  L +  +  +C+ +GI++ A+   
Sbjct: 159 GKIRSIGLANFNIGQVEQVWTKGLIKPAVLQVEMNPFLDQEEIRQFCREKGIILTAFMLT 218

Query: 487 GN---LFNRQPSAPAPRADDQRLVAIAQKYKKTVPQIVLRYLVELGVIPIPKSLHKDRVE 317
           GN      R+   P     ++ L +IA+ + K+V Q+++R+ ++L    + KS    R+ 
Sbjct: 219 GNPGSALYRKHEDP-NLLYNETLQSIAKGHGKSVVQVLVRWAIDLRTTALVKSSESKRIR 277

Query: 316 ENIQIYDFSLTPDEI 272
           +NI I+ F LT  EI
Sbjct: 278 QNINIFKFRLTSQEI 292


>Z81088-2|CAB03127.1|  297|Caenorhabditis elegans Hypothetical
           protein F53F1.2 protein.
          Length = 297

 Score = 79.8 bits (188), Expect = 2e-15
 Identities = 46/133 (34%), Positives = 73/133 (54%)
 Frame = -1

Query: 667 GLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQRSALLDYCKAQGIVVVAYTPF 488
           G  +SIGVSN+ I  LE LK+   V P   Q+E + +  R  L  YCK + I   A   F
Sbjct: 152 GKVRSIGVSNYEIVHLEELKTYAKVPPCANQLEYHPHFARIPLQKYCKEKNIFFQA---F 208

Query: 487 GNLFNRQPSAPAPRADDQRLVAIAQKYKKTVPQIVLRYLVELGVIPIPKSLHKDRVEENI 308
            +L   +P       +D  +V +A+K+  +VP ++L + +   V  +PKS+   R+ EN 
Sbjct: 209 SSLARHEPKL----IEDPVVVELAKKHNTSVPLVLLAWALRQNVGIVPKSVTPSRIVENF 264

Query: 307 QIYDFSLTPDEIQ 269
           ++ D +LTP++IQ
Sbjct: 265 KVIDIALTPEDIQ 277


>U21308-3|AAB93322.2|  321|Caenorhabditis elegans Hypothetical
           protein ZK1290.5 protein.
          Length = 321

 Score = 79.4 bits (187), Expect = 3e-15
 Identities = 43/135 (31%), Positives = 72/135 (53%)
 Frame = -1

Query: 658 KSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQRSALLDYCKAQGIVVVAYTPFGNL 479
           +SIGVSN++I+ L+ L     + P   QVE++    ++ L +YC   GI+ + Y P    
Sbjct: 138 RSIGVSNYSIEDLDELLEFASILPHANQVELHPWFHQADLKNYCDELGILTMGYCPL--- 194

Query: 478 FNRQPSAPAPRADDQRLVAIAQKYKKTVPQIVLRYLVELGVIPIPKSLHKDRVEENIQIY 299
                 A     +D+ L  IA KY+K+  QI LR+ ++  V  +PKS    R++EN  ++
Sbjct: 195 ------AKGKYLEDETLCKIASKYQKSPAQICLRWSIQQNVPTVPKSTDCRRLKENTNVF 248

Query: 298 DFSLTPDEIQLXEEF 254
           DF L+ +++     F
Sbjct: 249 DFELSAEDMNTLNSF 263


>U21324-6|AAA62562.1|  287|Caenorhabditis elegans Hypothetical
           protein C35D10.6 protein.
          Length = 287

 Score = 72.5 bits (170), Expect = 3e-13
 Identities = 38/132 (28%), Positives = 70/132 (53%)
 Frame = -1

Query: 667 GLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQRSALLDYCKAQGIVVVAYTPF 488
           G  +S+GVSNF I  LE LK +  V P+V QVE + +  +  L+ YC    I   AY+  
Sbjct: 141 GKLRSVGVSNFEICHLEELKKDSNVVPAVNQVEYHPHFHQDDLVKYCNENNIHFQAYSSL 200

Query: 487 GNLFNRQPSAPAPRADDQRLVAIAQKYKKTVPQIVLRYLVELGVIPIPKSLHKDRVEENI 308
           G+     P+     +++  +  +AQKY   +P ++L +    G+  +P++ + + V  N 
Sbjct: 201 GS-----PTYRKQLSEEPLIKELAQKYNVEIPVLLLGFAYCQGISVLPRTTNPEHVATNF 255

Query: 307 QIYDFSLTPDEI 272
           ++   ++T ++I
Sbjct: 256 KVTKLAITQEDI 267


>U50068-4|AAB37733.1|  287|Caenorhabditis elegans Hypothetical
           protein C01G5.5 protein.
          Length = 287

 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 38/133 (28%), Positives = 62/133 (46%)
 Frame = -1

Query: 667 GLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQRSALLDYCKAQGIVVVAYTPF 488
           G  +SIGVSN+    +E ++S   + P V Q+E + + QR  L  YC    I+  A++P 
Sbjct: 142 GKIRSIGVSNYEPHHIEEMRSYITIEPQVNQIEYHPHFQRKVLRAYCNKNEILFQAFSPL 201

Query: 487 GNLFNRQPSAPAPRADDQRLVAIAQKYKKTVPQIVLRYLVELGVIPIPKSLHKDRVEENI 308
           G               D  +  IA  +K TV  ++L ++++     + KS+   RV EN 
Sbjct: 202 GR-------GNKTLLGDSTMERIALCHKTTVANVILAWIMKGKYGVVAKSVTPSRVAENY 254

Query: 307 QIYDFSLTPDEIQ 269
                 L+ DE +
Sbjct: 255 TSLSLELSDDEFE 267


>Z81088-3|CAB03128.1|  283|Caenorhabditis elegans Hypothetical
           protein F53F1.3 protein.
          Length = 283

 Score = 54.4 bits (125), Expect = 9e-08
 Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
 Frame = -1

Query: 667 GLTKSIGVSNFNIQQLERLKSEG-GVTPSVLQVEINLNLQRSALLDYCKAQGIVVVAYTP 491
           G  +S+GVS+F I+ LE LK  G    P   QVE + +  R  L +YCK++GI    +  
Sbjct: 139 GKIRSVGVSSFEIRHLEELKDLGKNFPPCCNQVEYHPHFTREELKNYCKSEGIF---FQA 195

Query: 490 FGNLFNRQPSAPAPRADDQRLVAIAQKYKKTVPQIVLRYLVELGVIPIPKSLHKDRVEEN 311
           F +L     +        + +  +A+KY      ++L +     V  IPKS + +R+ +N
Sbjct: 196 FSSLARHNETL----LSSEIITRLAEKYHVPKTTVLLSWATSQKVGIIPKSTNPERLAQN 251

Query: 310 IQ 305
           ++
Sbjct: 252 LK 253


>Z71181-2|CAA94895.1|  301|Caenorhabditis elegans Hypothetical
           protein K07C5.2 protein.
          Length = 301

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 1/134 (0%)
 Frame = -1

Query: 667 GLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQRSALLDYCKAQGIVVVAYTPF 488
           G  +SIGVSN+ +  L  +     + P + Q E    L R  L  +C    IVV +Y+  
Sbjct: 154 GRVRSIGVSNYEVYHLVEMFEYAKIRPVLNQYEYQPYLTRPTLKKFCDLNNIVVQSYSSL 213

Query: 487 GNLFNRQPSAPAPRADDQRLVAIAQKYKKTVPQIVLRYLVELGVIPIPKSLHKDRVEENI 308
                           ++ LV + QKY +T   I+  +        IPKS    R+ +N+
Sbjct: 214 -------CWGDKEILQEKPLVDLCQKYNQTPQAILYAFAHCSNTSMIPKSATPSRIHDNL 266

Query: 307 -QIYDFSLTPDEIQ 269
                  LT DE++
Sbjct: 267 HNTIKIKLTEDELK 280


>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
            protein C34D4.14 protein.
          Length = 2761

 Score = 32.7 bits (71), Expect = 0.30
 Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
 Frame = -3

Query: 557  PSTVGSTGLLQGSRD-SCGGVHPLRQSVQPPAVGSSAAGRRPASRGHRPKIQENRSANRT 381
            PS+ GS+G   G +  S   +   RQ    P+V S+       S  H+    EN  A   
Sbjct: 1696 PSSGGSSGGAIGKKSMSTTNLVDERQKTSGPSVASTGQAASAESLQHQTPSLENLLARAM 1755

Query: 380  -QIFGGVRSNSDPEVPPQG 327
               FG +  N +PE  P G
Sbjct: 1756 PHAFGRIAENQEPEDEPMG 1774


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
            protein T19D12.1 protein.
          Length = 1844

 Score = 31.1 bits (67), Expect = 0.92
 Identities = 17/67 (25%), Positives = 26/67 (38%)
 Frame = -3

Query: 581  PAGRDQSEPSTVGSTGLLQGSRDSCGGVHPLRQSVQPPAVGSSAAGRRPASRGHRPKIQE 402
            P  +  ++P T+G+T  +  S  S G   P   S   P   SS  G    S   +P +  
Sbjct: 1455 PGTQGTTQPGTIGTTVTVPPSSSSIGSTAPQGSSSIQPIASSSTMGSTAGSSSPQPTVSS 1514

Query: 401  NRSANRT 381
                + T
Sbjct: 1515 TSVPSST 1521


>AF038613-11|AAB92054.2|  836|Caenorhabditis elegans Mammalian
           elks/cast/erc/rab6 interactingprotein homolog protein 1
           protein.
          Length = 836

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -3

Query: 503 GVHPLRQSVQPPAVGSSAAGRRPASRGHR 417
           G +P+     PP    SAA RRP  R HR
Sbjct: 19  GRNPMNYPSVPPHTSISAASRRPLQRQHR 47


>U23511-7|AAC46795.1|  435|Caenorhabditis elegans Hypothetical
           protein C32D5.7 protein.
          Length = 435

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
 Frame = -3

Query: 596 RHALRPAGRDQSEPSTVGS--TGLLQGSRDSCGGVHPLRQSVQPPAVGSSAAGRR-PASR 426
           R  L   G+ +++ ST+ S  +GL +    + GG  P+ ++  PP + S    R+ P  +
Sbjct: 331 RFTLPDVGQ-RTQTSTLESNISGLEEAMGKATGGTPPVHRNPSPPVIPSLNFSRQDPLRQ 389

Query: 425 GHR 417
           GHR
Sbjct: 390 GHR 392


>AL132860-6|CAB60526.1|  373|Caenorhabditis elegans Hypothetical
           protein Y56A3A.9 protein.
          Length = 373

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +3

Query: 582 TEGVTPPSDLSLSSC*MLKLDTPMDLVRPLVQDIGHS-LPRLPLIC 716
           T G TPP+ ++ S+   L LD P     P +QD   + LP  PL+C
Sbjct: 6   TSGKTPPATMAFSAPAALFLDQPPPQDLPGLQDPPLTPLPLPPLLC 51


>U41746-9|AAA83334.3|  559|Caenorhabditis elegans Groundhog
           (hedgehog-like family)protein 6 protein.
          Length = 559

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -2

Query: 492 PSAICSTASRRLQRRGPTTSVSWPSPKNTRKP 397
           P     T  R    R PTT+   P+P+ TR+P
Sbjct: 346 PVTQAPTTPRATTTRRPTTTTPRPTPRRTRRP 377


>U39854-3|AAA81078.2|  263|Caenorhabditis elegans Hypothetical
           protein W06B11.1 protein.
          Length = 263

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
 Frame = -3

Query: 488 RQSVQPPAVGSSAAGRRPASRG-HRPKIQENRSANRTQIFGGVRSNSDPEVPPQGQS*RE 312
           R S    AV S A+ R  +  G +RP+        R  +  GVR+  DP  P   ++ R+
Sbjct: 197 RASRASSAVSSHASSRNTSPIGRNRPRHDSVADLMRQDMLAGVRAEVDPNSPTGLKNARD 256

Query: 311 HSNLRL 294
             + R+
Sbjct: 257 FGHRRI 262


>AL034392-4|CAA22307.2|  203|Caenorhabditis elegans Hypothetical
           protein Y40B1A.4 protein.
          Length = 203

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
 Frame = -3

Query: 473 PPAVGSSAAGRRPASRGHR---PKIQENRSANRTQIFGGVRSNSDPEVP 336
           PP  G SA  R+P    HR   P++ E+   N    +G +      E P
Sbjct: 34  PPVAGPSAPARKPNQIQHRQMIPQMNEDGMMNMGNDYGDINGQGLGEAP 82


>AF039716-7|AAB96735.3|  617|Caenorhabditis elegans
           Sodium:neurotransmitter symporterfamily protein 1
           protein.
          Length = 617

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 369 TKYLSTICGTVFLYFWAMATRR 434
           TK+LST+C  ++ YFW     R
Sbjct: 119 TKFLSTLCLFLYYYFWTFHAGR 140


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,511,236
Number of Sequences: 27780
Number of extensions: 376476
Number of successful extensions: 1204
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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