Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_H23
(803 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1296 - 25951758-25951983,25952134-25952159,25952626-259527... 33 0.27
02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550 33 0.27
01_01_0448 - 3332238-3332330,3332414-3332481,3332570-3332618,333... 31 1.1
11_06_0610 - 25449085-25453284 29 3.3
12_01_0302 - 2286171-2286341,2286747-2286968 29 4.3
02_04_0203 - 20888010-20888162,20888242-20888469,20888969-208890... 29 4.3
09_04_0737 - 19822822-19822973,19823069-19823135,19823666-198238... 29 5.7
02_05_0640 - 30558523-30559027,30559123-30559252,30559388-305598... 29 5.7
03_02_0983 - 12933082-12934884,12935669-12936487,12936754-129367... 28 7.6
12_01_0298 - 2250517-2251235,2251331-2251577,2251615-2252951,225... 28 10.0
02_02_0718 - 13290764-13290897,13292375-13293041,13293364-132937... 28 10.0
>08_02_1296 -
25951758-25951983,25952134-25952159,25952626-25952710,
25952828-25952959,25953037-25953180,25953254-25953312,
25953381-25953687,25954211-25954292,25954369-25954502,
25954587-25954680,25954751-25954874,25955136-25955195
Length = 490
Score = 33.1 bits (72), Expect = 0.27
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = -1
Query: 716 LXIKPPSPAISGTSTRSSNPRFHTPTTPDLTSISINPLTPX*KEFAPG*SLRCHQRL 546
L I PSPAI+ T ++N +H P DL+ P T EF+PG + +CH+++
Sbjct: 329 LHIDQPSPAIANTIQVATNQLYH-PQQVDLSKEK-QPST----EFSPGQNSKCHKKV 379
>02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550
Length = 204
Score = 33.1 bits (72), Expect = 0.27
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = -1
Query: 728 GXFPLXIKPPSPAISGTSTR-SSNPR--FHTPTTPDLTSISINPLTP 597
G + I PPSPA + S+R S +PR F TP T T+ S +P +P
Sbjct: 19 GNLTVFITPPSPASTPRSSRPSESPRSGFSTPATAPRTAASPSPPSP 65
>01_01_0448 -
3332238-3332330,3332414-3332481,3332570-3332618,
3332716-3332798,3332900-3333023,3333389-3333486,
3333555-3333634,3333712-3333782,3333872-3333953,
3334158-3334237,3334365-3334416,3334843-3334958
Length = 331
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -1
Query: 692 AISGTSTRSSNPRFHTPTTP 633
A S T+TR S PR H PTTP
Sbjct: 2 AASSTATRLSPPRLHAPTTP 21
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -1
Query: 719 PLXIKPPSPAISGTSTRSSNPRFHTPTTPDLTSIS-INPLTPX*KEFAP 576
P PP+P +S P HTP+ P+ T S +P TP K +P
Sbjct: 613 PAEKSPPTPESKASSPPPPAPEGHTPSPPESTPPSEKSPPTPESKASSP 661
>12_01_0302 - 2286171-2286341,2286747-2286968
Length = 130
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 79 RLQRSRKKHGEDLPTGGRSRRKGEKLE*MQREEQ 180
RL+R RK + D+ G + +GEKLE + +E+
Sbjct: 57 RLERLRKGYARDVRAAGAMKVRGEKLENWREKEK 90
>02_04_0203 -
20888010-20888162,20888242-20888469,20888969-20889073,
20889148-20889225,20889308-20889382,20890037-20890123,
20890216-20890283,20890396-20890483,20890583-20890683,
20890793-20890913,20891008-20891169,20891271-20891441
Length = 478
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +2
Query: 482 ENKGAKPLXPCPVDEGVRYADGASDDNGGFXPARTPSXTA 601
E K A+P P PV G A +DDN G P P A
Sbjct: 384 EKKEAEPT-PVPVTVGAAVASSPADDNNGAAPQPEPFVAA 422
>09_04_0737 -
19822822-19822973,19823069-19823135,19823666-19823822,
19824003-19824177,19824364-19824481,19824676-19824874,
19824983-19825062,19825141-19825257,19825791-19825961,
19826121-19826597
Length = 570
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +2
Query: 71 FYVDSKGVGRNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVV 217
F+VD G G + ++++LAV+ G R CR VV DVVV
Sbjct: 93 FHVDPTGDGSSFLQLHRLAVE-GTRRLLAACCRSGVRTVVYTGSADVVV 140
>02_05_0640 - 30558523-30559027,30559123-30559252,30559388-30559868,
30560292-30560346,30560537-30560613,30561228-30561315,
30561490-30561593,30562050-30562231,30562347-30563109,
30563195-30563438,30564513-30564658,30565158-30565283,
30565404-30565517,30565595-30565762,30566283-30566528,
30566605-30566767,30566970-30567064,30567274-30567357,
30567769-30568055,30568359-30568572,30568923-30569140,
30569386-30569623,30570312-30571118,30571202-30571301,
30571694-30571737,30571824-30571973
Length = 1942
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = -2
Query: 238 PPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDPRHVSSDSFGVYVKS*SL 59
P F T+LY ++KD S+ L S+ Y L+DP S D+ + +
Sbjct: 1349 PEFHTLLYAEAARIIKDCWWLADSSRPVKELDSAVGYA-LLDPTWASQDNTSTAIGNIVA 1407
Query: 58 ILHSF 44
+LHSF
Sbjct: 1408 LLHSF 1412
>03_02_0983 -
12933082-12934884,12935669-12936487,12936754-12936795,
12937116-12937244
Length = 930
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = +2
Query: 503 LXPCPVDEGVRYADGASDDNG---GFXPARTPSXTASGD*WKWMLSLGWLVYG 652
L PC EG+ + D A D G F P S + D +L LG ++G
Sbjct: 199 LAPCSTQEGLNFTDKAMADQGEIEQFIPVPNSSTSIWSDQEAELLLLGLYIFG 251
>12_01_0298 -
2250517-2251235,2251331-2251577,2251615-2252951,
2256029-2256188
Length = 820
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 719 PLXIKPPSPAISGTSTRSSNPRFHTPTTPD 630
P + P +PA S +S SS+P TP + D
Sbjct: 327 PQSVVPSNPAASSSSVASSSPALATPESRD 356
>02_02_0718 -
13290764-13290897,13292375-13293041,13293364-13293719,
13294559-13294629,13295326-13295336
Length = 412
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 439 IPRILRSPPPTHPLIEDVVMATNQAIIDYK 350
+P++L+SPP T+ IED + + ID K
Sbjct: 382 LPQLLQSPPETYHAIEDGHNPSKTSFIDMK 411
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,491,864
Number of Sequences: 37544
Number of extensions: 441823
Number of successful extensions: 1350
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1349
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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