Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_H12
         (797 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC037311-1|AAH37311.2|  598|Homo sapiens calcium channel, voltag...    31   6.4  
AK128134-1|BAC87289.1|  377|Homo sapiens member 6 (SLC12A6).  pr...    30   8.4  

>BC037311-1|AAH37311.2|  598|Homo sapiens calcium channel,
           voltage-dependent, beta 1 subunit protein.
          Length = 598

 Score = 30.7 bits (66), Expect = 6.4
 Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 4/93 (4%)
 Frame = +2

Query: 404 YNFTGSTSLTRCYSHTEEANREHLSSTHKH-ALHRKNLHPPAEPEHRRIARHERTGRLIL 580
           + F G TS+TR  +    A R  L++  KH  + R N           I R     R + 
Sbjct: 258 HRFDGRTSITRVTADISLAKRSVLNNPSKHIIIERSNTRSSLAEVQSEIERIFELARTLQ 317

Query: 581 QVTTTSECVNFS---SPRKLACFLVLLACWSPK 670
            V   ++ +N     S   LA  +V +   SPK
Sbjct: 318 LVALDADTINHPAQLSKTSLAPIIVYIKITSPK 350


>AK128134-1|BAC87289.1|  377|Homo sapiens member 6 (SLC12A6).
           protein.
          Length = 377

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 24/81 (29%), Positives = 31/81 (38%), Gaps = 6/81 (7%)
 Frame = +2

Query: 314 SPSATCADSQDILPPCKLLTATNLTSHHANY----NFTGSTSLTRCYSHTEEANRE--HL 475
           S S TC+ +  +  P  L    +  SH   +      T S      +SHT        HL
Sbjct: 88  SHSHTCSHTHSLTCPHTLAPTRHTHSHACTHPHVQTHTASAYTFTTHSHTPGHTHSCSHL 147

Query: 476 SSTHKHALHRKNLHPPAEPEH 538
             TH HA    + HPP  P H
Sbjct: 148 IHTHSHA----HSHPPNAPTH 164


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,164,479
Number of Sequences: 237096
Number of extensions: 2556728
Number of successful extensions: 10989
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10983
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)