Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_H11
(805 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0175 + 22966151-22967614 40 0.002
01_06_0381 + 28878811-28879120,28880189-28880331,28880753-288815... 33 0.35
05_05_0227 - 23449579-23450459,23450574-23450691 32 0.61
01_07_0213 - 42028941-42029055,42029444-42029480,42029876-420302... 31 1.4
08_02_0707 - 20212190-20214592 30 1.9
05_05_0392 + 24629528-24630442 30 2.5
11_06_0341 - 22507098-22507982,22508616-22508783,22518740-225188... 29 3.3
11_01_0044 + 340486-340854,341855-341911,343100-343974,344065-34... 29 3.3
07_03_0471 + 18501496-18502104,18503009-18503260,18503367-185035... 29 3.3
03_06_0180 + 32175658-32178145,32178765-32178808 29 3.3
01_06_0781 + 31962661-31963089,31963174-31963228,31964310-319645... 24 3.9
03_02_0257 + 6907997-6908504,6909316-6909348,6910163-6910308 29 4.3
02_03_0287 + 17320242-17320481,17323422-17324767,17325124-17325142 29 4.3
07_03_1731 - 29102403-29102720,29103529-29103735,29103937-291052... 29 5.7
06_01_0767 + 5732573-5732670,5733223-5733278,5733928-5734007,573... 29 5.7
05_07_0200 - 28368890-28369021,28369169-28369303,28369918-283699... 29 5.7
01_06_0208 - 27540077-27540992,27541310-27541497 29 5.7
01_06_0140 - 26881282-26881290,26882027-26882128,26882816-268829... 29 5.7
08_01_0201 + 1635964-1637010 28 7.6
04_03_0394 - 15340726-15341990,15342091-15342186,15342278-15342302 28 7.6
04_03_0333 + 14569377-14569401,14569493-14569588,14569689-14570953 28 7.6
03_04_0023 + 16537257-16537272,16537515-16537929,16538404-165384... 28 7.6
01_07_0074 - 40894916-40895754,40896322-40896691,40897239-408972... 28 7.6
01_03_0224 + 13940419-13941786 28 7.6
01_01_0645 + 4890647-4890682,4891684-4891929,4892021-4892317,489... 28 7.6
12_01_0314 - 2395113-2395760,2396151-2396738,2397218-2397252,239... 28 10.0
10_08_0936 - 21679002-21679800,21679893-21680116,21681174-216813... 28 10.0
07_01_0262 + 1957973-1958220,1958272-1958935 28 10.0
06_03_0913 + 25913231-25913609,25913702-25913775,25914400-259145... 28 10.0
04_03_0854 + 20314535-20314834 28 10.0
04_01_0535 + 6964311-6964685 28 10.0
02_04_0232 + 21130122-21130454,21130895-21131053,21131424-211315... 28 10.0
02_01_0624 - 4681834-4682298,4684250-4684398,4684479-4684557,468... 28 10.0
01_06_0090 + 26358051-26359157,26359582-26359701,26359968-263600... 28 10.0
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 28 10.0
>05_05_0175 + 22966151-22967614
Length = 487
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +2
Query: 137 PTRRRTLAQVQPERGAPISAVRAGGVISSFGGPVGRPPL-PSRRSARFSRTGWAATAEVS 313
PT RR+ G P SA R GG S G P PPL P R FS W ++ V
Sbjct: 73 PTPRRSCCGSSSAAGTPRSAARCGGG-GSPGAPPSSPPLSPQRTHVPFS---WESSPGVP 128
Query: 314 RPATCADS--QDILPP 355
+ A C +++LPP
Sbjct: 129 KDAACGRKVVREVLPP 144
>01_06_0381 +
28878811-28879120,28880189-28880331,28880753-28881532,
28882568-28883968
Length = 877
Score = 32.7 bits (71), Expect = 0.35
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +2
Query: 434 RYSHTEDANREHLSSTHKHALHRKNLHPPAEPEHRRIARHERTGR 568
R S +ED + EH SS +H HR + H + EHR RH+R R
Sbjct: 775 RDSSSEDEH-EHRSSKSRHR-HRDDYHYHEDDEHRSSHRHQRDHR 817
Score = 31.9 bits (69), Expect = 0.61
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +2
Query: 386 SHHANYNFTGSTSLTRRYSHTEDANREHLSSTHKHALHRKNLHPPAEPEHRR 541
S NY+ S +R+ +ED+ R H S HKH L R + EP H R
Sbjct: 725 SDEENYDSEESYKHSRKKHRSEDS-RAHTSDVHKHKLKRHS--KDLEPRHHR 773
>05_05_0227 - 23449579-23450459,23450574-23450691
Length = 332
Score = 31.9 bits (69), Expect = 0.61
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -2
Query: 264 RLDGNGGRPTGPPNDEITPPARTADIGAPRSGC-TCARVRR 145
R DG GGRP+ P E T P R GAP C C+ + R
Sbjct: 231 RGDGGGGRPSAPARREGTDPCRPVLGGAPFVICGKCSELLR 271
>01_07_0213 -
42028941-42029055,42029444-42029480,42029876-42030244,
42030332-42031201,42051574-42052891
Length = 902
Score = 30.7 bits (66), Expect = 1.4
Identities = 25/72 (34%), Positives = 34/72 (47%)
Frame = +2
Query: 257 SRRSARFSRTGWAATAEVSRPATCADSQDILPPCKLLTATNLTSHHANYNFTGSTSLTRR 436
+RR R TG A+ S PAT + + P +LLT+ TSH + N T S
Sbjct: 671 ARRRERQQLTGSAS----SSPATASAAAASKKP-RLLTSQTTTSHTSTSNATTPRSFDTT 725
Query: 437 YSHTEDANREHL 472
SH + + RE L
Sbjct: 726 SSHQDASFRESL 737
>08_02_0707 - 20212190-20214592
Length = 800
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +2
Query: 386 SHHANYNFTGSTSLTRRYSHTEDANREHLSSTHKHALHRKNLHPPAEPEHRRIARH 553
SHH +++ S + S TE++ +E+ S H H H + H +E H++ H
Sbjct: 549 SHHHDHHHDSSNEESHHNSLTENSCKENHSHCHGHDHHHHHHHDHSE-HHQQSGDH 603
>05_05_0392 + 24629528-24630442
Length = 304
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/74 (27%), Positives = 27/74 (36%)
Frame = +2
Query: 137 PTRRRTLAQVQPERGAPISAVRAGGVISSFGGPVGRPPLPSRRSARFSRTGWAATAEVSR 316
PTRR + +A AG + GP +PP+P R R S T +
Sbjct: 187 PTRRSPSPATKRPPDQRRTAASAGAAAGAASGPQRKPPVPPRPCGRASPRRAQETNSPAS 246
Query: 317 PATCADSQDILPPC 358
T S+ P C
Sbjct: 247 STTTTQSRGPPPHC 260
>11_06_0341 -
22507098-22507982,22508616-22508783,22518740-22518893,
22519396-22519728,22521106-22521374
Length = 602
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/46 (45%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +2
Query: 143 RRRTLAQVQPERGAPISAVRAGGV-ISSFGGPVGRPPL-PSRRSAR 274
RRR L + QP R P A R G I ++GG GR L P RR R
Sbjct: 4 RRRRLGKEQP-RSTPAMASREGAASIRTYGGGRGRSRLDPLRRRCR 48
>11_01_0044 +
340486-340854,341855-341911,343100-343974,344065-344398,
345553-345645,345913-346062
Length = 625
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/71 (29%), Positives = 29/71 (40%)
Frame = +2
Query: 218 SSFGGPVGRPPLPSRRSARFSRTGWAATAEVSRPATCADSQDILPPCKLLTATNLTSHHA 397
S FG + P RR F+RTGW A A V P + L+ T L +
Sbjct: 419 SFFGRLLSALPDFLRRKVSFARTGWLAAALVPMPMAFFLMWKLHDVNTLVAGTALIGLSS 478
Query: 398 NYNFTGSTSLT 430
+ F + S+T
Sbjct: 479 GFIFAAAVSVT 489
>07_03_0471 + 18501496-18502104,18503009-18503260,18503367-18503537,
18503693-18503743,18503868-18503960,18504125-18504220,
18504318-18504368,18504452-18504570,18504909-18505017,
18505391-18505513,18505590-18505661,18505963-18506034,
18506125-18506191,18506260-18506402,18506494-18506565,
18506632-18506760,18507317-18507472,18507579-18507692,
18507791-18507889,18507974-18508051,18508402-18508536,
18509081-18509155,18509247-18509361,18509458-18509828,
18509903-18509965,18510049-18510120,18510285-18510413,
18510512-18510628,18510902-18511018
Length = 1289
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = -2
Query: 318 GRETSAVAAHPVRENRADRLDGNGGRPTGPPNDEITPPARTADIGAPR 175
G A +PV + R+ R G+ P GPPN P + PR
Sbjct: 980 GASFGAAGTNPVADKRSGRGKGHSFVPFGPPNGAHKPGVHPSGYPLPR 1027
>03_06_0180 + 32175658-32178145,32178765-32178808
Length = 843
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 238 RPASVTVEAICPVLADWVGRDRGSLTSGYLCRLTRHFTTMQTS 366
RP SVT+ ++ P L D G ++G GY+ R H S
Sbjct: 345 RPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVS 387
>01_06_0781 +
31962661-31963089,31963174-31963228,31964310-31964557,
31965080-31965281,31965793-31965912,31965976-31966100,
31966182-31966288,31966726-31966792
Length = 450
Score = 24.2 bits (50), Expect(2) = 3.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 119 PATAQCPTRRRTLAQVQPERGAP 187
P A+ P RRTLA P G P
Sbjct: 65 PPLAEDPAGRRTLASPYPSPGLP 87
Score = 23.4 bits (48), Expect(2) = 3.9
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2
Query: 239 GRPPLPSRRSA 271
G PPLPSRRS+
Sbjct: 85 GLPPLPSRRSS 95
>03_02_0257 + 6907997-6908504,6909316-6909348,6910163-6910308
Length = 228
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +2
Query: 116 GPATAQCPTRRRTL---AQVQPERGAPISAVRAGGVISSFG 229
G A CP R+R L A QP G + RAG V ++FG
Sbjct: 55 GGGVAGCPRRQRQLGSGAPAQPGSGGSAARRRAGVVAAAFG 95
>02_03_0287 + 17320242-17320481,17323422-17324767,17325124-17325142
Length = 534
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 336 HKTFYHHANFLPQQILPATTQTTILRVPPLLHDVTPTLRTPTAN 467
H+ F +FLP +I L+VPP LH V P P A+
Sbjct: 75 HRWFAQGFHFLPARIPMDGPSGWFLKVPPPLHTVDPPGSPPPAS 118
>07_03_1731 -
29102403-29102720,29103529-29103735,29103937-29105210,
29105298-29105734,29106370-29106764,29106921-29107051,
29109034-29109052
Length = 926
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 338 QDILPPCKLLTATNLTSHHANYNFTGSTSLTRRYSHTEDANREHLSSTHKHALHRKNL-H 514
+D CK+ T N + +HA G + R+SH ED E ++S ++ H
Sbjct: 266 EDTRDTCKITTLCNASRNHA-----GLLDASERFSHLEDYKSESVTSVEDIYEDLQDFNH 320
Query: 515 PPAEP 529
P +P
Sbjct: 321 PSIDP 325
>06_01_0767 +
5732573-5732670,5733223-5733278,5733928-5734007,
5735334-5735372,5735563-5735950,5736049-5737562
Length = 724
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +3
Query: 357 ANFLPQQILPATTQTTILRVPPLLHDVT--PTLRTPTANTCQARTSTHFTGKTCIRQRN 527
A P+ + +++ + PP DV+ P TP N C+ + S H +GK +N
Sbjct: 652 AGLTPRVMYKPANESSAVPDPPCRRDVSMEPCFLTPPYNNCRMKRSAH-SGKVVAHVKN 709
>05_07_0200 -
28368890-28369021,28369169-28369303,28369918-28369947,
28370019-28370093,28370222-28370333,28370440-28370621,
28370723-28370854,28372193-28373479
Length = 694
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +2
Query: 218 SSFGGPVGRPPLPSRRSARFSRTGWAATAEVSRPAT 325
S GP PP P + R SRT AT S PA+
Sbjct: 334 SGSAGPPAPPPPPPPAAKRTSRTSTPATTSSSAPAS 369
>01_06_0208 - 27540077-27540992,27541310-27541497
Length = 367
Score = 28.7 bits (61), Expect = 5.7
Identities = 24/70 (34%), Positives = 29/70 (41%)
Frame = -2
Query: 315 RETSAVAAHPVRENRADRLDGNGGRPTGPPNDEITPPARTADIGAPRSGCTCARVRRLVG 136
R A AA P R+ R RP P +++ AR A R R +R VG
Sbjct: 84 RRRRAGAACPARQQRCGGF-ATAARPGNPRRGDVSWDARDGARAARR------RRQRRVG 136
Query: 135 HCAVAGPTRD 106
H VAG RD
Sbjct: 137 HAEVAGWRRD 146
>01_06_0140 -
26881282-26881290,26882027-26882128,26882816-26882924,
26883712-26883860,26883941-26884043,26884635-26884810,
26885004-26885066,26885258-26885346,26885428-26885538,
26885610-26885744,26886415-26886580,26886788-26886856,
26886943-26887230,26888612-26888866
Length = 607
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -2
Query: 573 IRRPVRSCLAMRRCSGSAGGCRFFR*SACLCVLDKCSRL 457
+R R A R C GSAG R R SA V+ + RL
Sbjct: 31 LRPAARLSFAPRWCGGSAGAARARRESAVTSVISRAPRL 69
>08_01_0201 + 1635964-1637010
Length = 348
Score = 28.3 bits (60), Expect = 7.6
Identities = 27/98 (27%), Positives = 36/98 (36%), Gaps = 2/98 (2%)
Frame = -2
Query: 333 SAQVAGRETSAVAAHPVRENRADRLDGNGG-RPTGPPNDEITPPARTADIGAPRSGCTCA 157
SA + G + A+ A R DRL + R G P P AD+ P
Sbjct: 107 SAAMYGVKVEAIQALQANYVRRDRLTIDCAVRVVGKPRVSAAAPLTAADVPPPDLAAHLG 166
Query: 156 RVRRLVGHCAVAGPTRDVNVCS-RASVCYR*VVLASPL 46
R+ L H V R V + R + R V A+ L
Sbjct: 167 RLLDLKSHADVTFDVRGVQFAAHRVVLAMRSAVFAAEL 204
>04_03_0394 - 15340726-15341990,15342091-15342186,15342278-15342302
Length = 461
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -2
Query: 261 LDGNGGRPTGPPNDEITPPARTADIGAPRSGCTCARVRRLVGHCAVAG 118
+D GG +G DE+ P R++D G PRS A HC V G
Sbjct: 1 MDSAGGN-SGKLFDEMPP--RSSDRGCPRSPSPAAMEHGFDRHCVVLG 45
>04_03_0333 + 14569377-14569401,14569493-14569588,14569689-14570953
Length = 461
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -2
Query: 261 LDGNGGRPTGPPNDEITPPARTADIGAPRSGCTCARVRRLVGHCAVAG 118
+D GG +G DE+ P R++D G PRS A HC V G
Sbjct: 1 MDSAGGN-SGKLFDEMPP--RSSDRGCPRSPSPAAMEHGFDRHCVVLG 45
>03_04_0023 +
16537257-16537272,16537515-16537929,16538404-16538466,
16538604-16538607
Length = 165
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 416 STSLTRRYSHTEDANREHLSSTHKHALHRKNLHPPAEPEHRRIARHE 556
+TSL R H + + H HA H + PP H ++ RHE
Sbjct: 5 ATSLNRSIDHKQGGQQRGTPQQHLHAGHAQE-QPPGH-GHGQVQRHE 49
>01_07_0074 -
40894916-40895754,40896322-40896691,40897239-40897291,
40897456-40897593,40897646-40897716,40898655-40898900,
40899205-40899386,40899494-40899697
Length = 700
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 151 APPRRTLCCGRSNQRRQRVFQSFSVLQISGFGF 53
APPRRT G++ + R R Q F+V Q G+
Sbjct: 48 APPRRTFSFGQAYKTRHRQPQVFTVWQTLMLGY 80
>01_03_0224 + 13940419-13941786
Length = 455
Score = 28.3 bits (60), Expect = 7.6
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 2/99 (2%)
Frame = -2
Query: 369 VRSLHGGKMSCESAQVAGRETSAVAAHPVRENRADRLDGNGGRPTGPPNDEITPPARTAD 190
+R + G K+ + + A A + E A G+G RP+ P D++ P R++
Sbjct: 86 LREVEGRKLVIDCSGEGVVFVEADADVRLEEMEAAAAGGHGLRPSFPCVDQLVPDVRSSG 145
Query: 189 IGAPRSGCTCA--RVRRLVGHCAVAGPTRDVNVCSRASV 79
G C +V RL+ + G + +VC +
Sbjct: 146 RGGSVLSCPLVGIQVTRLLCGGFIVGTAVNHSVCDAMGI 184
>01_01_0645 +
4890647-4890682,4891684-4891929,4892021-4892317,
4892407-4892574,4892674-4892841,4892924-4893004,
4893105-4893171,4893657-4893751,4894027-4894099,
4894177-4894247,4894325-4894374,4895263-4895375,
4895461-4895513
Length = 505
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 350 PPCKLLTATNLTSHHANYNFTGSTSLTRRYSHTEDANREHL 472
P C + N S H G+T L ++ ++T NR HL
Sbjct: 96 PSCSVGVYVNCGSVHEAPETLGATQLLKKMAYTTTTNRSHL 136
>12_01_0314 -
2395113-2395760,2396151-2396738,2397218-2397252,
2397546-2397632,2397913-2397985,2398648-2398714,
2398795-2398931,2400196-2400217,2400733-2400807,
2402281-2402365,2402605-2403334
Length = 848
Score = 27.9 bits (59), Expect = 10.0
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -2
Query: 345 MSCESAQVAGRETSAVAAHPVRENRADRLDGNGGRPTGPPNDEITPPA 202
+SCES + +GR +S V +R+ R + GR PP + P+
Sbjct: 248 VSCESLKKSGRHSSTVNRGDLRKPRMPPFRSSTGRLRIPPLGPLEDPS 295
>10_08_0936 -
21679002-21679800,21679893-21680116,21681174-21681361,
21681505-21682597
Length = 767
Score = 27.9 bits (59), Expect = 10.0
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -2
Query: 240 PTGPPNDEITPPARTADIGAPRSGCTCARVRRLVGHCAVAGPTR 109
P PP PP A + APR G +V ++ +VA P R
Sbjct: 112 PPPPPTQSHQPPPPVA-VRAPRGGPRRLKVPHILSDSSVASPAR 154
>07_01_0262 + 1957973-1958220,1958272-1958935
Length = 303
Score = 27.9 bits (59), Expect = 10.0
Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Frame = +2
Query: 104 TSLVGPATAQCPTRRRTLAQVQPER-GAPISAVRAGGVI-SSFGGPVGRPPLPSRRSARF 277
+S P CPTRRR E+ P S GV ++G G P + +
Sbjct: 90 SSSSAPVAVGCPTRRRPSPAAAAEKCSLPASPPTTAGVARRTYGTRGGWPCQAPPEALKE 149
Query: 278 SRTGWAATAEVSRPATCADSQDILPPCKLLTA 373
+ A +++ A A + + L KLL A
Sbjct: 150 MEDAFRAQMKITEDAIKAHTAECLSSKKLLKA 181
>06_03_0913 +
25913231-25913609,25913702-25913775,25914400-25914540,
25914834-25914946,25915359-25915491,25916213-25916351,
25916428-25916527,25916906-25916963,25917122-25917199,
25917278-25917376,25917657-25917735,25917826-25917974,
25918529-25918834,25918994-25919032
Length = 628
Score = 27.9 bits (59), Expect = 10.0
Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = -2
Query: 597 SEVVVTCKIRRPVRS--CLAMRRC 532
S++ +TCKI RPVRS C RC
Sbjct: 398 SQLCITCKIVRPVRSKHCSTCDRC 421
>04_03_0854 + 20314535-20314834
Length = 99
Score = 27.9 bits (59), Expect = 10.0
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -2
Query: 327 QVAGRETSAVAAHPVRENRADRLDGNGGRPTGPPNDEITPPARTADIGAPRSGCTCAR 154
++A + +A AA + N + GGR + P + PPA D P+S T A+
Sbjct: 43 RLAKTKAAAAAAAATKANGNGNMPAGGGRASLPDLNS-APPAHGHDKAVPKSKKTAAK 99
>04_01_0535 + 6964311-6964685
Length = 124
Score = 27.9 bits (59), Expect = 10.0
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +2
Query: 191 SAVRAGGVISSFGGPVGRPPLPSRRSARFSRTGWAATA 304
+A AG ++ GGPV P+ R +A W A A
Sbjct: 12 TAAAAGSTTAAAGGPVAADPVVGRAAAAADPVVWRAAA 49
>02_04_0232 +
21130122-21130454,21130895-21131053,21131424-21131582,
21132420-21132512,21133321-21133437,21133623-21133697,
21133878-21134104,21134200-21135073
Length = 678
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 449 EDANREHLSSTHKHALHRKNLHPPAEPEHRR 541
EDA+++H S + H+ H ++ H EHRR
Sbjct: 397 EDAHKQHSSRDYSHSKHERSSH----TEHRR 423
>02_01_0624 -
4681834-4682298,4684250-4684398,4684479-4684557,
4684827-4684925,4685004-4685081,4685231-4685288,
4685814-4685913,4686000-4686008,4686105-4686138,
4686729-4686911,4687099-4687126,4687268-4687380,
4688253-4688459,4689212-4689511
Length = 633
Score = 27.9 bits (59), Expect = 10.0
Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = -2
Query: 597 SEVVVTCKIRRPVRS--CLAMRRC 532
S++ +TCKI RPVRS C RC
Sbjct: 363 SQLCITCKIVRPVRSKHCSTCDRC 386
>01_06_0090 +
26358051-26359157,26359582-26359701,26359968-26360099,
26360194-26360375,26360488-26360602,26362001-26362135,
26362261-26362395
Length = 641
Score = 27.9 bits (59), Expect = 10.0
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +2
Query: 152 TLAQVQPERGAPISAVRAGGVISSFGGPVGRPPLPSRRSARFSRTGWAATAEVSRPATCA 331
+++ QPE + SA ++ GP PP P A F ++A++ VS P+T A
Sbjct: 180 SVSHEQPESAS--SAANPASLVQR--GPPIPPPPPPVPPAAFKSKSYSASSRVSLPSTSA 235
Query: 332 DS 337
S
Sbjct: 236 PS 237
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 27.9 bits (59), Expect = 10.0
Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
Frame = -2
Query: 333 SAQVAGRETSAVAAHPVRENRADRLDGNGGRPTGPPNDEITPPARTAD----IGAPRSGC 166
SA G E H R + DG+GG G N + PA AD GA +
Sbjct: 6 SAATGGDEPPPEPHHQAGVQRPPKNDGDGGEEAGGGN--VGVPAAAADEDPTAGAVGAAG 63
Query: 165 TCARVRRLVGHCAVAGPTRDVN 100
+R RR G A A D++
Sbjct: 64 RGSRRRRKAGRRAAAPDEEDLD 85
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,376,743
Number of Sequences: 37544
Number of extensions: 516436
Number of successful extensions: 2084
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2082
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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