Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_H03
(782 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0381 + 28878811-28879120,28880189-28880331,28880753-288815... 33 0.34
02_03_0287 + 17320242-17320481,17323422-17324767,17325124-17325142 32 0.59
05_05_0227 - 23449579-23450459,23450574-23450691 31 0.78
03_02_0704 - 10542187-10542339,10542466-10542522,10542667-105427... 31 1.4
08_02_0707 - 20212190-20214592 30 2.4
03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524 29 3.2
01_07_0213 - 42028941-42029055,42029444-42029480,42029876-420302... 29 4.2
04_03_0394 - 15340726-15341990,15342091-15342186,15342278-15342302 29 5.5
04_03_0333 + 14569377-14569401,14569493-14569588,14569689-14570953 29 5.5
01_06_0140 - 26881282-26881290,26882027-26882128,26882816-268829... 29 5.5
01_06_0208 - 27540077-27540992,27541310-27541497 28 7.3
01_01_0645 + 4890647-4890682,4891684-4891929,4892021-4892317,489... 28 7.3
10_08_0936 - 21679002-21679800,21679893-21680116,21681174-216813... 28 9.6
06_03_0913 + 25913231-25913609,25913702-25913775,25914400-259145... 28 9.6
04_03_0854 + 20314535-20314834 28 9.6
03_04_0023 + 16537257-16537272,16537515-16537929,16538404-165384... 28 9.6
02_01_0624 - 4681834-4682298,4684250-4684398,4684479-4684557,468... 28 9.6
>01_06_0381 +
28878811-28879120,28880189-28880331,28880753-28881532,
28882568-28883968
Length = 877
Score = 32.7 bits (71), Expect = 0.34
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +1
Query: 433 RRYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHERTGR 570
R + E EH SS +H HR + H + EHR RH+R R
Sbjct: 773 RHRDSSSEDEHEHRSSKSRHR-HRDDYHYHEDDEHRSSHRHQRDHR 817
Score = 32.3 bits (70), Expect = 0.45
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +1
Query: 388 SHHANYNFTGSTSLTRRYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRR 543
S NY+ S +R+ H E +R H S HKH L R + EP H R
Sbjct: 725 SDEENYDSEESYKHSRK-KHRSEDSRAHTSDVHKHKLKRHS--KDLEPRHHR 773
>02_03_0287 + 17320242-17320481,17323422-17324767,17325124-17325142
Length = 534
Score = 31.9 bits (69), Expect = 0.59
Identities = 20/62 (32%), Positives = 25/62 (40%)
Frame = +2
Query: 284 GLAGPRPRKSHVRLPVQTHKTFYHHANFLPQQILPATTQTTILRVPPLLHDVTPTLRKPT 463
GL P K H+ F +FLP +I L+VPP LH V P P
Sbjct: 57 GLLSFDPEKRLTAAEAMEHRWFAQGFHFLPARIPMDGPSGWFLKVPPPLHTVDPPGSPPP 116
Query: 464 AN 469
A+
Sbjct: 117 AS 118
>05_05_0227 - 23449579-23450459,23450574-23450691
Length = 332
Score = 31.5 bits (68), Expect = 0.78
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -1
Query: 266 RLDGXGGRPTGPPNDEITPPARTADIGAPRSGC-TCARVRR 147
R DG GGRP+ P E T P R GAP C C+ + R
Sbjct: 231 RGDGGGGRPSAPARREGTDPCRPVLGGAPFVICGKCSELLR 271
>03_02_0704 -
10542187-10542339,10542466-10542522,10542667-10542737,
10542823-10542901,10543021-10543161
Length = 166
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = -3
Query: 222 RDHASSTDCR--YWSPALRLHLR*GAPPRRTLCCGRSNQRRQRVFQSFSVLQDK 67
R +AS+TD R Y A++ H P R G +N+R QR+ +++SVL DK
Sbjct: 30 RKNASATDVRAAYRRLAMKWH-----PDRCVSDPGEANRRFQRIQEAYSVLSDK 78
>08_02_0707 - 20212190-20214592
Length = 800
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +1
Query: 388 SHHANYNFTGSTSLTRRYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARH 555
SHH +++ S + S TE + +E+ S H H H + H +E H++ H
Sbjct: 549 SHHHDHHHDSSNEESHHNSLTENSCKENHSHCHGHDHHHHHHHDHSE-HHQQSGDH 603
>03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524
Length = 651
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -1
Query: 314 ETSAVAAQPVRENRADRLDGXGGRPTGPPNDEITPPARTADIGAPRSGCT 165
E A QP R+N + GG N ++ + TAD AP GCT
Sbjct: 388 EAVASKVQPFRDNA----ESVGGSINSTGNGHVSSKSPTADEAAPPGGCT 433
>01_07_0213 -
42028941-42029055,42029444-42029480,42029876-42030244,
42030332-42031201,42051574-42052891
Length = 902
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +1
Query: 313 SRPATCADSQDILPPCKLLTATNLTSHHANYNFTGSTSLTRRYSHTEEANREHL 474
S PAT + + P +LLT+ TSH + N T S SH + + RE L
Sbjct: 685 SSPATASAAAASKKP-RLLTSQTTTSHTSTSNATTPRSFDTTSSHQDASFRESL 737
>04_03_0394 - 15340726-15341990,15342091-15342186,15342278-15342302
Length = 461
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 263 LDGXGGRPTGPPNDEITPPARTADIGAPRSGCTCARVRRLVGHCAVAG 120
+D GG +G DE+ P R++D G PRS A HC V G
Sbjct: 1 MDSAGGN-SGKLFDEMPP--RSSDRGCPRSPSPAAMEHGFDRHCVVLG 45
>04_03_0333 + 14569377-14569401,14569493-14569588,14569689-14570953
Length = 461
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 263 LDGXGGRPTGPPNDEITPPARTADIGAPRSGCTCARVRRLVGHCAVAG 120
+D GG +G DE+ P R++D G PRS A HC V G
Sbjct: 1 MDSAGGN-SGKLFDEMPP--RSSDRGCPRSPSPAAMEHGFDRHCVVLG 45
>01_06_0140 -
26881282-26881290,26882027-26882128,26882816-26882924,
26883712-26883860,26883941-26884043,26884635-26884810,
26885004-26885066,26885258-26885346,26885428-26885538,
26885610-26885744,26886415-26886580,26886788-26886856,
26886943-26887230,26888612-26888866
Length = 607
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -1
Query: 575 IRRPVRSCLAMRRCSGSAGGCRFFR*SACLCVLDKCSRL 459
+R R A R C GSAG R R SA V+ + RL
Sbjct: 31 LRPAARLSFAPRWCGGSAGAARARRESAVTSVISRAPRL 69
>01_06_0208 - 27540077-27540992,27541310-27541497
Length = 367
Score = 28.3 bits (60), Expect = 7.3
Identities = 24/70 (34%), Positives = 29/70 (41%)
Frame = -1
Query: 317 RETSAVAAQPVRENRADRLDGXGGRPTGPPNDEITPPARTADIGAPRSGCTCARVRRLVG 138
R A AA P R+ R RP P +++ AR A R R +R VG
Sbjct: 84 RRRRAGAACPARQQRCGGF-ATAARPGNPRRGDVSWDARDGARAARR------RRQRRVG 136
Query: 137 HCAVAGPTRD 108
H VAG RD
Sbjct: 137 HAEVAGWRRD 146
>01_01_0645 +
4890647-4890682,4891684-4891929,4892021-4892317,
4892407-4892574,4892674-4892841,4892924-4893004,
4893105-4893171,4893657-4893751,4894027-4894099,
4894177-4894247,4894325-4894374,4895263-4895375,
4895461-4895513
Length = 505
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +1
Query: 352 PPCKLLTATNLTSHHANYNFTGSTSLTRRYSHTEEANREHL 474
P C + N S H G+T L ++ ++T NR HL
Sbjct: 96 PSCSVGVYVNCGSVHEAPETLGATQLLKKMAYTTTTNRSHL 136
>10_08_0936 -
21679002-21679800,21679893-21680116,21681174-21681361,
21681505-21682597
Length = 767
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -1
Query: 242 PTGPPNDEITPPARTADIGAPRSGCTCARVRRLVGHCAVAGPTR 111
P PP PP A + APR G +V ++ +VA P R
Sbjct: 112 PPPPPTQSHQPPPPVA-VRAPRGGPRRLKVPHILSDSSVASPAR 154
>06_03_0913 +
25913231-25913609,25913702-25913775,25914400-25914540,
25914834-25914946,25915359-25915491,25916213-25916351,
25916428-25916527,25916906-25916963,25917122-25917199,
25917278-25917376,25917657-25917735,25917826-25917974,
25918529-25918834,25918994-25919032
Length = 628
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = -1
Query: 599 SEVVVTCKIRRPVRS--CLAMRRC 534
S++ +TCKI RPVRS C RC
Sbjct: 398 SQLCITCKIVRPVRSKHCSTCDRC 421
>04_03_0854 + 20314535-20314834
Length = 99
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -1
Query: 329 QVAGRETSAVAAQPVRENRADRLDGXGGRPTGPPNDEITPPARTADIGAPRSGCTCAR 156
++A + +A AA + N + GGR + P + PPA D P+S T A+
Sbjct: 43 RLAKTKAAAAAAAATKANGNGNMPAGGGRASLPDLNS-APPAHGHDKAVPKSKKTAAK 99
>03_04_0023 +
16537257-16537272,16537515-16537929,16538404-16538466,
16538604-16538607
Length = 165
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +1
Query: 418 STSLTRRYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHE 558
+TSL R H + + H HA H + PP H ++ RHE
Sbjct: 5 ATSLNRSIDHKQGGQQRGTPQQHLHAGHAQE-QPPGH-GHGQVQRHE 49
>02_01_0624 -
4681834-4682298,4684250-4684398,4684479-4684557,
4684827-4684925,4685004-4685081,4685231-4685288,
4685814-4685913,4686000-4686008,4686105-4686138,
4686729-4686911,4687099-4687126,4687268-4687380,
4688253-4688459,4689212-4689511
Length = 633
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = -1
Query: 599 SEVVVTCKIRRPVRS--CLAMRRC 534
S++ +TCKI RPVRS C RC
Sbjct: 363 SQLCITCKIVRPVRSKHCSTCDRC 386
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,559,831
Number of Sequences: 37544
Number of extensions: 472585
Number of successful extensions: 1699
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1699
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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