Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_H01
         (747 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0160 - 27095727-27096008,27096164-27096652,27096983-270971...    31   1.3  
09_04_0737 - 19822822-19822973,19823069-19823135,19823666-198238...    29   5.2  
02_02_0718 - 13290764-13290897,13292375-13293041,13293364-132937...    28   9.1  

>01_06_0160 -
           27095727-27096008,27096164-27096652,27096983-27097132,
           27097656-27097920,27097995-27098274,27100311-27100388,
           27100597-27101240,27101334-27101412,27101489-27101612,
           27101782-27101882,27102870-27103068
          Length = 896

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
 Frame = +1

Query: 502 GETPLXMPSDEGVRYADGASDDNGGFNPGANSFXYGVRGLM----EMDVXSGVVGVWNRG 669
           GE+   +PSD  +   DG +  N G     NS  Y  RG      + D    +  VW +G
Sbjct: 334 GESSSAIPSDRHLEIIDGNNHFNNGLLH--NSSAYQSRGNHYDDNDDDDDEDLGSVWLQG 391

Query: 670 FDDXG*CXRXXRGXWLDA 723
           +D  G      RG WL A
Sbjct: 392 WDGMGWDEPTFRGVWLRA 409


>09_04_0737 -
           19822822-19822973,19823069-19823135,19823666-19823822,
           19824003-19824177,19824364-19824481,19824676-19824874,
           19824983-19825062,19825141-19825257,19825791-19825961,
           19826121-19826597
          Length = 570

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +2

Query: 80  FYVDSKGVGRNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVV 226
           F+VD  G G +  ++++LAV+ G R      CR     VV     DVVV
Sbjct: 93  FHVDPTGDGSSFLQLHRLAVE-GTRRLLAACCRSGVRTVVYTGSADVVV 140


>02_02_0718 -
           13290764-13290897,13292375-13293041,13293364-13293719,
           13294559-13294629,13295326-13295336
          Length = 412

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 448 IPRILRSPPPTHPLIEDVVMATNQAIIDYK 359
           +P++L+SPP T+  IED    +  + ID K
Sbjct: 382 LPQLLQSPPETYHAIEDGHNPSKTSFIDMK 411


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,605,516
Number of Sequences: 37544
Number of extensions: 343823
Number of successful extensions: 960
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 958
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)