SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_G21
         (862 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain...    31   7.1  
Y00970-1|CAA68784.1|  421|Homo sapiens protein ( Human mRNA for ...    30   9.4  
X66188-1|CAA46956.1|  421|Homo sapiens proacrosin protein.             30   9.4  
X54017-1|CAA37964.1|  421|Homo sapiens preproacrosin protein.          30   9.4  
M77381-1|AAA51575.1|  184|Homo sapiens acrosin protein.                30   9.4  
CR456366-1|CAG30252.1|  421|Homo sapiens ACR protein.                  30   9.4  
AL078621-10|CAB81647.1|  232|Homo sapiens protein ( G islands.  ...    30   9.4  

>AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain 4
            protein protein.
          Length = 3567

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = +2

Query: 593  PPTXXRPPXSPXXPXPXPXXPXPS 664
            PPT   PP  P  P P P  P PS
Sbjct: 1994 PPTPPPPPPPPPPPPPPPPPPPPS 2017


>Y00970-1|CAA68784.1|  421|Homo sapiens protein ( Human mRNA for
           acrosin (EC 3.4.21.10). ).
          Length = 421

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = +2

Query: 593 PPTXXRPPXSPXXPXPXPXXPXPS 664
           PP    PP SP  P P P  P PS
Sbjct: 350 PPPPPPPPASPLPPPPPPPPPTPS 373


>X66188-1|CAA46956.1|  421|Homo sapiens proacrosin protein.
          Length = 421

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = +2

Query: 593 PPTXXRPPXSPXXPXPXPXXPXPS 664
           PP    PP SP  P P P  P PS
Sbjct: 350 PPPPPPPPASPLPPPPPPPPPTPS 373


>X54017-1|CAA37964.1|  421|Homo sapiens preproacrosin protein.
          Length = 421

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = +2

Query: 593 PPTXXRPPXSPXXPXPXPXXPXPS 664
           PP    PP SP  P P P  P PS
Sbjct: 350 PPPPPPPPASPLPPPPPPPPPTPS 373


>M77381-1|AAA51575.1|  184|Homo sapiens acrosin protein.
          Length = 184

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = +2

Query: 593 PPTXXRPPXSPXXPXPXPXXPXPS 664
           PP    PP SP  P P P  P PS
Sbjct: 113 PPPPPPPPASPLPPPPPPPPPTPS 136


>CR456366-1|CAG30252.1|  421|Homo sapiens ACR protein.
          Length = 421

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = +2

Query: 593 PPTXXRPPXSPXXPXPXPXXPXPS 664
           PP    PP SP  P P P  P PS
Sbjct: 350 PPPPPPPPASPLPPPPPPPPPTPS 373


>AL078621-10|CAB81647.1|  232|Homo sapiens protein ( G islands.
           ).).
          Length = 232

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = +2

Query: 593 PPTXXRPPXSPXXPXPXPXXPXPS 664
           PP    PP SP  P P P  P PS
Sbjct: 161 PPPPPPPPPSPLPPPPPPPPPTPS 184


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,709,222
Number of Sequences: 237096
Number of extensions: 821289
Number of successful extensions: 3475
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3156
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -