Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_G19
         (830 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF273707-2|AAL35410.1| 1041|Drosophila melanogaster PFTAIRE-inte...    29   5.9  
AE014297-815|AAN13400.1| 1041|Drosophila melanogaster CG33720-PB...    29   5.9  
AE014297-814|AAF54288.3| 1041|Drosophila melanogaster CG33720-PA...    29   5.9  

>AF273707-2|AAL35410.1| 1041|Drosophila melanogaster
           PFTAIRE-interacting factor 1B protein.
          Length = 1041

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
 Frame = -2

Query: 196 EAPPXRSGCTCARVRRLVGD--CAVAGPTRDVNVCVP--ELQCVID 71
           E PP + GC C   R L+ D  C     T    +C P  E++  ID
Sbjct: 830 ECPPEQQGCLCCHCRALICDEECKTVANTLRSGMCDPLCEMKYFID 875


>AE014297-815|AAN13400.1| 1041|Drosophila melanogaster CG33720-PB,
           isoform B protein.
          Length = 1041

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
 Frame = -2

Query: 196 EAPPXRSGCTCARVRRLVGD--CAVAGPTRDVNVCVP--ELQCVID 71
           E PP + GC C   R L+ D  C     T    +C P  E++  ID
Sbjct: 830 ECPPEQQGCLCCHCRALICDEECKTVANTLRSGMCDPLCEMKYFID 875


>AE014297-814|AAF54288.3| 1041|Drosophila melanogaster CG33720-PA,
           isoform A protein.
          Length = 1041

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
 Frame = -2

Query: 196 EAPPXRSGCTCARVRRLVGD--CAVAGPTRDVNVCVP--ELQCVID 71
           E PP + GC C   R L+ D  C     T    +C P  E++  ID
Sbjct: 830 ECPPEQQGCLCCHCRALICDEECKTVANTLRSGMCDPLCEMKYFID 875


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,059,201
Number of Sequences: 53049
Number of extensions: 349048
Number of successful extensions: 656
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 652
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)