Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_G15
(880 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 37 0.004
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.054
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.29
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 30 0.38
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.50
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.87
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 2.0
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 28 2.0
SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces p... 27 3.5
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 4.7
SPBC428.02c |eca39|SPBC582.12c|branched chain amino acid aminotr... 26 8.1
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.7 bits (81), Expect = 0.004
Identities = 25/80 (31%), Positives = 26/80 (32%), Gaps = 1/80 (1%)
Frame = +2
Query: 557 APGXPPXTRXIXXSKXSXPXXP-PPXXPPRXXLPXPXXXXXSCPXXXFPXPPXPPXXLXP 733
AP PP S+ S P P PP PP P S P PP PP
Sbjct: 400 APALPPLGNA---SRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIA 456
Query: 734 PXPPXXRXTXSPXPRTXPFP 793
P P P P P P
Sbjct: 457 PPLPAGMPAAPPLPPAAPAP 476
Score = 29.1 bits (62), Expect = 0.87
Identities = 33/131 (25%), Positives = 39/131 (29%), Gaps = 11/131 (8%)
Frame = +2
Query: 428 PXXRCXXFXXPGPXSXPSXHNXXXLXPX---PRXXA--AWXXXXXXPRAPGXPPXTRXIX 592
P R P P P N P PR A + P PP + +
Sbjct: 241 PPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVS 300
Query: 593 XSKXSX--PXXPPPXXPPRXXLPXPXXXXXSCPXXXFPXPPXPPXXLXP---PXPPXXRX 757
+ + PPP P R P S P PP PP P PP R
Sbjct: 301 AAALAANKKRPPPPPPPSRRNRGKPPIGNGS-SNSSLPPPPPPPRSNAAGSIPLPPQGRS 359
Query: 758 T-XSPXPRTXP 787
P PR+ P
Sbjct: 360 APPPPPPRSAP 370
Score = 28.3 bits (60), Expect = 1.5
Identities = 21/80 (26%), Positives = 25/80 (31%), Gaps = 4/80 (5%)
Frame = +3
Query: 597 PXPRXRXXHXPXXPPXVXXRXHXXXPXXVPPXXSPXXXPP-PXXSPPPXP---XXXXPXX 764
P P P PP P PP P P P +PP P P
Sbjct: 391 PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP 450
Query: 765 XXSXXXXPFPVGLXXSLPPL 824
+ P P G+ + PPL
Sbjct: 451 PSAPIAPPLPAGM-PAAPPL 469
Score = 27.9 bits (59), Expect = 2.0
Identities = 29/107 (27%), Positives = 34/107 (31%), Gaps = 12/107 (11%)
Frame = +2
Query: 554 RAPGXPPXTRXIXXSKXSXPXXPPPXXPP-RXXLPXPXXXXXSCPXXXFPXPPXP----- 715
+ P PP +R + + PPP PP R P S P PP P
Sbjct: 289 KPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAA 348
Query: 716 ------PXXLXPPXPPXXRXTXSPXPRTXPFPRXSVRXXSPPXLXXP 838
P P PP R +P P P S R S P P
Sbjct: 349 GSIPLPPQGRSAPPPPPPR--SAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 25.8 bits (54), Expect = 8.1
Identities = 18/65 (27%), Positives = 18/65 (27%)
Frame = +2
Query: 551 PRAPGXPPXTRXIXXSKXSXPXXPPPXXPPRXXLPXPXXXXXSCPXXXFPXPPXPPXXLX 730
P P PP S P P P LP P PP PP
Sbjct: 418 PTPPSLPPSAPPSLPP--SAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPA 475
Query: 731 PPXPP 745
PP P
Sbjct: 476 PPPAP 480
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.1 bits (72), Expect = 0.054
Identities = 32/115 (27%), Positives = 36/115 (31%), Gaps = 11/115 (9%)
Frame = +2
Query: 551 PRAPGXPPXTRXIXXSKXSXPXXPPPXXPPRXXLPXPXXXXXSCPXXXFP--------XP 706
P AP P + S PP PP L P + P P P
Sbjct: 963 PAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAP 1022
Query: 707 PXP-PXXLXPPXPPXXRXTXSPXP-RTXPFPRXSVRXXS-PPXLXXPRXXRPXPP 862
P P P PP P P P T P P+ S S PP + P P P
Sbjct: 1023 PVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIP 1077
Score = 31.5 bits (68), Expect = 0.16
Identities = 29/109 (26%), Positives = 34/109 (31%), Gaps = 5/109 (4%)
Frame = +2
Query: 551 PRAPGXPPXTRX-IXXSKXSXPXXPPPXXPP---RXXLPXPXXXXXSCPXXXFPXPPXPP 718
P G PP + + P PP P +P P P PP PP
Sbjct: 1134 PVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Query: 719 XXLXPPXP-PXXRXTXSPXPRTXPFPRXSVRXXSPPXLXXPRXXRPXPP 862
PP P P P P T P P + PP + P P P
Sbjct: 1194 PSEAPPVPKPSVGVPPVPPPSTAP-PVPTPSAGLPP-VPVPTAKAPPVP 1240
Score = 28.7 bits (61), Expect = 1.2
Identities = 28/127 (22%), Positives = 33/127 (25%), Gaps = 4/127 (3%)
Frame = +3
Query: 375 PXSXPPCXXPSAXXTRDTRXGAAXPSXXPAPXPXPLAIIXXX*XXXPGXXLPGXXXRXXP 554
P + PP PS+ A P P P + + P P P
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPP----VPAPSGIPPVPKPSVAAPPVPKPSVAVPPVP 1115
Query: 555 GXXAXHPXPGXSGXPXPRXRXXHXPXXPPXVXXRXHXXXPXXVPPXXSPXXXPPPXXSP- 731
P P S P P P P PP P PP +P
Sbjct: 1116 APSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPS 1175
Query: 732 ---PPXP 743
PP P
Sbjct: 1176 SGIPPVP 1182
Score = 28.7 bits (61), Expect = 1.2
Identities = 30/127 (23%), Positives = 35/127 (27%), Gaps = 5/127 (3%)
Frame = +2
Query: 458 PGPXSXPSXHNXXXLXPXPRXXAAWXXXXXXPRA--PGXPPXTRXIXXSKXSX--PXXPP 625
P P P P ++ P A P PP + K S P PP
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Query: 626 PXXPPRXXLPXPXXXXXSCPXXXFPXPPXP-PXXLXPPXPPXXRXTXSPXPRTXPFPRXS 802
P P +P P P PP P P P SP P P S
Sbjct: 1213 PSTAP--PVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPHSNASPSPTSS 1270
Query: 803 VRXXSPP 823
+ P
Sbjct: 1271 SMASAAP 1277
Score = 28.3 bits (60), Expect = 1.5
Identities = 35/151 (23%), Positives = 41/151 (27%), Gaps = 1/151 (0%)
Frame = +3
Query: 375 PXSXPPCXXP-SAXXTRDTRXGAAXPSXXPAPXPXPLAIIXXX*XXXPGXXLPGXXXRXX 551
P S PP P SA ++ A P P P + P LP
Sbjct: 982 PTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSS-------KAPPVPLPSADAPPI 1034
Query: 552 PGXXAXHPXPGXSGXPXPRXRXXHXPXXPPXVXXRXHXXXPXXVPPXXSPXXXPPPXXSP 731
P P P + P P PP V P P +P P P
Sbjct: 1035 PVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPV-PAPSSEIPSIPAPSGAPPVPAPSGIPP 1093
Query: 732 PPXPXXXXPXXXXSXXXXPFPVGLXXSLPPL 824
P P P P PV PP+
Sbjct: 1094 VPKPSVAAPPVPKPSVAVP-PVPAPSGAPPV 1123
Score = 28.3 bits (60), Expect = 1.5
Identities = 26/133 (19%), Positives = 32/133 (24%)
Frame = +2
Query: 464 PXSXPSXHNXXXLXPXPRXXAAWXXXXXXPRAPGXPPXTRXIXXSKXSXPXXPPPXXPPR 643
P P+ + P P P P + + P P P P
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAP- 1121
Query: 644 XXLPXPXXXXXSCPXXXFPXPPXPPXXLXPPXPPXXRXTXSPXPRTXPFPRXSVRXXSPP 823
+P P P P P PP P P P P + PP
Sbjct: 1122 -PVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP 1180
Query: 824 XLXXPRXXRPXPP 862
P PP
Sbjct: 1181 VPKPAAGVPPVPP 1193
Score = 27.9 bits (59), Expect = 2.0
Identities = 28/124 (22%), Positives = 32/124 (25%), Gaps = 3/124 (2%)
Frame = +2
Query: 458 PGPXSXPSXHNXXXLXPXPRXXAAWXXXXXXPRAPGXPPXTRXIXXSKXSXPXXPPPXXP 637
P + P + P P A AP P + K S P P
Sbjct: 1097 PSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPS 1156
Query: 638 PRXXLPXPXXXXXSCPXXXFPXPPXPPXXL-XPPXPPXXRXTXSPXPR--TXPFPRXSVR 808
+P P P PP P PP PP P P P P S
Sbjct: 1157 GAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTA 1216
Query: 809 XXSP 820
P
Sbjct: 1217 PPVP 1220
Score = 27.5 bits (58), Expect = 2.7
Identities = 22/80 (27%), Positives = 26/80 (32%)
Frame = +2
Query: 620 PPPXXPPRXXLPXPXXXXXSCPXXXFPXPPXPPXXLXPPXPPXXRXTXSPXPRTXPFPRX 799
P P PP P P S P P PP P P +P R P P+
Sbjct: 961 PRPAAPPSIPPPLPVSNILSSPTSE-PPKDHPPS--APLSKPVSTSPAAPLARVPPVPKL 1017
Query: 800 SVRXXSPPXLXXPRXXRPXP 859
S + +PP P P
Sbjct: 1018 SSK--APPVPLPSADAPPIP 1035
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.7 bits (66), Expect = 0.29
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = +3
Query: 684 PPXXSPXXXPPPXXSPPPXPXXXXPXXXXSXXXXPFPVGLXXSLP 818
P +P PPP PPP P S P P S+P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 27.9 bits (59), Expect = 2.0
Identities = 31/139 (22%), Positives = 37/139 (26%), Gaps = 2/139 (1%)
Frame = +2
Query: 458 PGPXSXPSXHNXXXLXPXPRXXAAWXXXXXXPRAPGXPPXTRXIXXSKXSXPXXPPPXXP 637
P PS H + P P A P+APG T S P P P
Sbjct: 1433 PTNPGAPSNHAPQVVPPAPMHAVA----PVQPKAPGM--VTNAPAPSSAPAPPAPVSQLP 1486
Query: 638 PRXX-LPXPXXXXXSCPXXXFPXPPXP-PXXLXPPXPPXXRXTXSPXPRTXPFPRXSVRX 811
P +P P P P PP SP P P +
Sbjct: 1487 PAVPNVPVPSMIPSVAQQPPSSVAPATAPSSTLPPSQSSFAHVPSPAPPAPQHPSAAALS 1546
Query: 812 XSPPXLXXPRXXRPXPPXQ 868
+P P P P +
Sbjct: 1547 SAPADNSMPHRSSPYAPQE 1565
Score = 25.8 bits (54), Expect = 8.1
Identities = 18/62 (29%), Positives = 20/62 (32%)
Frame = +2
Query: 557 APGXPPXTRXIXXSKXSXPXXPPPXXPPRXXLPXPXXXXXSCPXXXFPXPPXPPXXLXPP 736
AP P T + + P P PP P S P P P PP PP
Sbjct: 1682 APAHPVSTPPVRPQSAAPPQMSAPTPPPP---PMSVPPPPSAP----PMPAGPPSAPPPP 1734
Query: 737 XP 742
P
Sbjct: 1735 LP 1736
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 30.3 bits (65), Expect = 0.38
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 3/48 (6%)
Frame = +2
Query: 611 PXXPPPXXPPRXXLPXPXXXXXSCPXXXFPXPPXPPXXL---XPPXPP 745
P PPP P P P P PP PP + PP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 29.9 bits (64), Expect = 0.50
Identities = 22/86 (25%), Positives = 24/86 (27%)
Frame = +2
Query: 623 PPXXPPRXXLPXPXXXXXSCPXXXFPXPPXPPXXLXPPXPPXXRXTXSPXPRTXPFPRXS 802
PP PP +P P P PP P PP PP P P P +
Sbjct: 732 PPPPPPAVIVPTPAPAP-------IPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPA 784
Query: 803 VRXXSPPXLXXPRXXRPXPPXQXXSL 880
V P P SL
Sbjct: 785 VSAGGSRYYAPAPQAEPEPKIDETSL 810
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.9 bits (64), Expect = 0.50
Identities = 22/75 (29%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Frame = +2
Query: 620 PPPXXPPRXXLPXPXXXXXSCPXXXFPXPPXPPXXLXPPXPPXXRXTXSPXPRTXP--FP 793
PP PPR +P P S P PP P L PP P P + P P
Sbjct: 139 PPTSAPPRPSIPPP--SPASAPPIPSKAPPI-PSSLPPPAQPAAPVKSPPSAPSLPSAVP 195
Query: 794 RXSVRXXSPPXLXXP 838
+ PP P
Sbjct: 196 PMPPKVPPPPLSQAP 210
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/62 (27%), Positives = 18/62 (29%)
Frame = +2
Query: 551 PRAPGXPPXTRXIXXSKXSXPXXPPPXXPPRXXLPXPXXXXXSCPXXXFPXPPXPPXXLX 730
P P PP + S P PP P S P PP PP
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Query: 731 PP 736
PP
Sbjct: 204 PP 205
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.1 bits (62), Expect = 0.87
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 691 PXPPAXXPPRGPXPPXPP 744
P PP PP P PP PP
Sbjct: 13 PPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = +3
Query: 681 VPPXXSPXXXPPPXXSPPPXPXXXXP 758
+PP P PPP PP P P
Sbjct: 4 LPPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +3
Query: 672 PXXVPPXXSPXXXPPPXXSPPPXP 743
P PP P PP PPP P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.9 bits (59), Expect = 2.0
Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 4/56 (7%)
Frame = +2
Query: 611 PXXPPPXXPPRXX----LPXPXXXXXSCPXXXFPXPPXPPXXLXPPXPPXXRXTXS 766
P PPP PP+ LP P + PP P PP PP T S
Sbjct: 239 PPPPPPTLPPQSTNTSQLPMPSRNVNNL-GSQVNIPPPPATPSQPPRPPTNASTRS 293
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.9 bits (59), Expect = 2.0
Identities = 18/67 (26%), Positives = 21/67 (31%)
Frame = -1
Query: 802 RPTGKGXXXXXXXXXGXXXXGXGGGEXXGGGXXXGEXXGGTXXGXXXWXRXXTXGGXXGX 623
+P G G G GG GG G GG+ G R + GG G
Sbjct: 126 KPKGARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGG 185
Query: 622 WXXRXRG 602
RG
Sbjct: 186 SRGGFRG 192
>SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Frame = -3
Query: 332 PPPP----LRSLISNLSNTCDLTPLPEWSCEQSAW 240
PPP +RS+ L D+TP+ +W ++S W
Sbjct: 101 PPPSRERSVRSIEQELEQLRDVTPINQWKRKRSLW 135
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.6 bits (56), Expect = 4.7
Identities = 20/64 (31%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Frame = -3
Query: 800 TXGERXXXXGXXXXWXXXXGGXGGXGP-RGGXXAGGXGRXDXXXXXXVXSXGDXGGGXRX 624
T G R G GG GG G RGG GG G + G GG
Sbjct: 4 TPGSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Query: 623 VGXA 612
G A
Sbjct: 64 RGGA 67
Score = 26.2 bits (55), Expect = 6.1
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -2
Query: 744 GGXGGXRXXGGXGGXGXXXXGXXXXXXXGXGRXXRGGXXGG 622
GG GG R G G G G RGG GG
Sbjct: 30 GGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
>SPBC428.02c |eca39|SPBC582.12c|branched chain amino acid
aminotransferase Eca39|Schizosaccharomyces pombe|chr
2|||Manual
Length = 380
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 329 PPPLRSLISNLSNTCDLTPLPEW 261
P P+ S ++N +L PLPEW
Sbjct: 10 PKPMDSSHIKVTNVKELKPLPEW 32
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,862,687
Number of Sequences: 5004
Number of extensions: 27292
Number of successful extensions: 206
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 131
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 440481800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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