Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_G10
(846 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327... 146 3e-35
12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342... 138 4e-33
01_01_1051 + 8290395-8290760,8291611-8291820,8292874-8292978,829... 33 0.29
04_04_0148 - 23114000-23114113,23114215-23114350,23114813-231149... 30 2.7
03_05_1096 - 30364144-30365310,30365825-30365971,30366087-303663... 29 3.5
01_06_0343 + 28566513-28566644,28566791-28568494,28569178-285692... 29 3.5
03_05_0901 + 28635672-28636094,28637623-28637802,28637903-286381... 29 6.2
08_01_0332 + 2971361-2971439,2971596-2971783,2971985-2972062,297... 28 8.1
>11_01_0427 +
3274817-3274901,3275587-3275697,3275979-3276283,
3276406-3276815,3276942-3277200
Length = 389
Score = 146 bits (353), Expect = 3e-35
Identities = 97/224 (43%), Positives = 124/224 (55%), Gaps = 5/224 (2%)
Frame = -2
Query: 773 SHLWKSXFNGGTIXGXK*NGXREHSGEXYPCRFCVLPQDEMIDCIGVTQGQRIQRCHFSL 594
+HL + NGGTI G + E P V +DEMID IGVT+G+ + +
Sbjct: 179 AHLMEIQINGGTIADKVDYGYKFFEKEI-PVD-AVFQKDEMIDIIGVTKGKGYEGV-VTR 235
Query: 593 AHKEATPVRHTRXLGKLPALELGILLGCRSL*LVLVRKVIITVLK*TRKSIVLXQGIHKK 414
P + R L K+ + G R V TV + + ++KK
Sbjct: 236 WGVTRLPRKTHRGLRKVACI--GAWHPAR---------VSYTVARAGQNGYHHRTEMNKK 284
Query: 413 DGKVIKNN-----ASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRK 249
K+ K+ A TE+D +EK ITPMGGFPHYG V D++MIKGCC+GPKKR++TLR+
Sbjct: 285 VYKIGKSGQESHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQ 344
Query: 248 SLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 117
SL T R ALE+I LKFIDTSSKFGHGRFQT +K F G LK
Sbjct: 345 SLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQRFFGKLK 388
Score = 100 bits (239), Expect = 2e-21
Identities = 41/48 (85%), Positives = 46/48 (95%)
Frame = -1
Query: 576 PRKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 433
PRKTH+ LRKVACIGAWHP+RVS+TVARAGQ GYHHRTEMNKK+Y+IG
Sbjct: 242 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG 289
Score = 38.3 bits (85), Expect = 0.008
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = -3
Query: 697 EXPIPVDSVFCPKMK*LTALVSPKGKGYKGVTSRWHTKKLP 575
E IPVD+VF K + + + KGKGY+GV +RW +LP
Sbjct: 203 EKEIPVDAVF-QKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 242
>12_01_0435 +
3428552-3428636,3429242-3429352,3429434-3429738,
3429821-3430230,3430323-3430556,3430934-3431378,
3432300-3432390,3433292-3433518,3433786-3433861,
3434009-3434134,3434221-3434384
Length = 757
Score = 138 bits (335), Expect = 4e-33
Identities = 93/216 (43%), Positives = 120/216 (55%), Gaps = 5/216 (2%)
Frame = -2
Query: 773 SHLWKSXFNGGTIXGXK*NGXREHSGEXYPCRFCVLPQDEMIDCIGVTQGQRIQRCHFSL 594
+HL + NGGTI G + E P V +DEMID IGVT+G+ + +
Sbjct: 179 AHLMEIQINGGTIADKVDYGYKFFEKEI-PVD-AVFQKDEMIDIIGVTKGKGYEGV-VTR 235
Query: 593 AHKEATPVRHTRXLGKLPALELGILLGCRSL*LVLVRKVIITVLK*TRKSIVLXQGIHKK 414
P + R L K+ + G R V TV + + ++KK
Sbjct: 236 WGVTRLPRKTHRGLRKVACI--GAWHPAR---------VSYTVARAGQNGYHHRTEMNKK 284
Query: 413 DGKVIKNN-----ASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRK 249
K+ K+ A TE+D +EK ITPMGGFPHYG V D++MIKGCC+GPKKR++TLR+
Sbjct: 285 VYKIGKSGQESHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQ 344
Query: 248 SLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADK 141
SL T R ALE+I LKFIDTSSKFGHGRFQT +K
Sbjct: 345 SLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEK 380
Score = 100 bits (239), Expect = 2e-21
Identities = 41/48 (85%), Positives = 46/48 (95%)
Frame = -1
Query: 576 PRKTHKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 433
PRKTH+ LRKVACIGAWHP+RVS+TVARAGQ GYHHRTEMNKK+Y+IG
Sbjct: 242 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG 289
Score = 38.3 bits (85), Expect = 0.008
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = -3
Query: 697 EXPIPVDSVFCPKMK*LTALVSPKGKGYKGVTSRWHTKKLP 575
E IPVD+VF K + + + KGKGY+GV +RW +LP
Sbjct: 203 EKEIPVDAVF-QKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 242
>01_01_1051 +
8290395-8290760,8291611-8291820,8292874-8292978,
8293040-8293048,8294426-8294539,8294632-8294796
Length = 322
Score = 33.1 bits (72), Expect = 0.29
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 621 LPLGDTNAVNHFILGQNTESTGIGFSRMFSGPISLXSSNGTTVKXG 758
+PLG T V HF+ GQ + TGI + F+G + +G G
Sbjct: 163 IPLGTTITVRHFVPGQFVDVTGITKGKGFAGGMKRHGFSGMPASHG 208
>04_04_0148 -
23114000-23114113,23114215-23114350,23114813-23114912,
23115003-23115113,23115197-23115234,23115359-23115429,
23116998-23117176,23117272-23117389
Length = 288
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -2
Query: 650 IDCIGVTQGQRIQRCHFSLAHKEATPVRHTRXLGK 546
+ CIG G +I R + H +++PVR+ LGK
Sbjct: 164 LQCIGEAFGGKIIRAPSGVMHGKSSPVRYDEELGK 198
>03_05_1096 - 30364144-30365310,30365825-30365971,30366087-30366393,
30366541-30366849,30367544-30370567,30370640-30372290,
30372373-30373463,30373544-30373646,30373737-30374439,
30374654-30375783,30375913-30376027,30376504-30376695,
30377443-30377616,30378438-30378494,30378581-30378716,
30378842-30378927,30379023-30379092,30379993-30380021,
30380444-30380456,30380762-30381006
Length = 3582
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -2
Query: 374 DLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 279
D + + +P+GG P YG ++ D + C +G
Sbjct: 1371 DPTSAAASPIGGIPRYGRLSGDVYVCNQCTIG 1402
>01_06_0343 +
28566513-28566644,28566791-28568494,28569178-28569240,
28569241-28569310,28570438-28570715,28571886-28571963,
28573017-28573715,28573811-28573913,28574096-28574196,
28574272-28574446,28574843-28575013,28575534-28575634,
28575706-28575771
Length = 1246
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -1
Query: 651 D*LHWCHPRAKDTKVSLLVGTQRSYPRKTHKXLRKVACIGAWHPSRVSFTVAR 493
D L +PR + ++VS ++RS PR R GAW+P SFT+ R
Sbjct: 565 DGLQCAYPRRRSSRVSAT--SRRSKPR------RSSVSAGAWNPRSPSFTIKR 609
>03_05_0901 +
28635672-28636094,28637623-28637802,28637903-28638172,
28638506-28638757,28639205-28639453,28639533-28639606,
28639798-28639915,28640421-28640555,28640813-28640965
Length = 617
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 498 ARAGQKGYHHRTEMNKKIYRIGXRNPQ 418
+RA GY + +E N +IYR+ R+P+
Sbjct: 590 SRADNLGYEYMSEQNNEIYRLLLRDPK 616
>08_01_0332 +
2971361-2971439,2971596-2971783,2971985-2972062,
2972354-2972425,2972513-2972631,2972858-2972942,
2973096-2973185,2973268-2973369,2973448-2973624,
2973874-2973954,2974511-2974582,2974662-2974756,
2974831-2974919,2975016-2975078,2975161-2975204,
2975554-2975685
Length = 521
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 3 FFFFFFALSNVYFHGLHLRL 62
FFFFFF +N+ FH L+ L
Sbjct: 307 FFFFFFFCANILFHHLNYLL 326
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,947,688
Number of Sequences: 37544
Number of extensions: 464563
Number of successful extensions: 1164
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1161
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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