Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_G05
         (832 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0529 - 20067974-20068588,20069982-20070048,20070156-200702...    31   1.5  
01_06_1659 + 38961637-38961639,38962361-38962433,38962531-389626...    28   7.9  

>12_02_0529 -
           20067974-20068588,20069982-20070048,20070156-20070264,
           20070357-20070402,20070501-20070636,20070745-20070866,
           20070944-20071306,20071914-20072043,20072129-20072202,
           20072620-20072709,20072836-20072875,20073047-20073117,
           20074248-20074277
          Length = 630

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -1

Query: 832 FLXXXQYXDNLYGTXXASVRXXAXKGKHCIXDVSGKXXQEIASST 698
           FL       N+YGT   +V     +GK CI D+  +  + + +S+
Sbjct: 240 FLEFAHVHGNVYGTSVEAVESVTDEGKRCILDIDVQGARSVRASS 284


>01_06_1659 +
           38961637-38961639,38962361-38962433,38962531-38962613,
           38962732-38962858,38962950-38963029,38963112-38963228,
           38963393-38963527,38963714-38963883,38963970-38964087
          Length = 301

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -3

Query: 599 ERALKMEQEFAEYFTAVVTGDTPEEIYSKVKAVIAAE 489
           E   K +  F+EY    +  D  E +Y KV A I A+
Sbjct: 211 EEPEKFQAHFSEYLKKGIDADGMESLYKKVHAAIRAD 247


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,402,161
Number of Sequences: 37544
Number of extensions: 258752
Number of successful extensions: 490
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 490
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2291695380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)