Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_G03
(777 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z19158-4|CAJ76964.1| 719|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z35639-8|CAI46560.1| 634|Caenorhabditis elegans Hypothetical pr... 34 0.099
Z35639-7|CAA84697.3| 959|Caenorhabditis elegans Hypothetical pr... 34 0.099
AY571963-1|AAS78587.1| 959|Caenorhabditis elegans ATX-2 protein. 34 0.099
AF016448-10|ABR92607.1| 849|Caenorhabditis elegans Smek (dictyo... 33 0.30
AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek (dictyos... 33 0.30
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 0.92
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 0.92
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 0.92
Z77658-2|CAB01156.1| 457|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.9
>Z19158-4|CAJ76964.1| 719|Caenorhabditis elegans Hypothetical
protein T23G5.2a protein.
Length = 719
Score = 50.0 bits (114), Expect = 2e-06
Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 10/141 (7%)
Frame = -2
Query: 494 NPVDEVNSALCVGGGADEGRSVLERKGWREGEHYHRVEPXPAVPRXGRAXQGSHVMRCSG 315
NPV+ V++A +GG + + + + G R+E V + G + QGSH +G
Sbjct: 590 NPVEMVSAA--IGGASHQHPDLQCAPELKIGTPQLRLEEKAVVFQEGDSMQGSHYCSRAG 647
Query: 314 AYVLQWR--------CELLD--APPAQLVYFHETLASHHYRGSMSSLQSGAGGFSCLSGK 165
Y++QWR D + +L+Y++E L S ++RGS++SL+ SC S
Sbjct: 648 TYIMQWRVPETAAGHSSTFDFGSHKCRLIYYYEILNSENFRGSVASLE------SCRSSS 701
Query: 164 STGSSCPSRWCEPPPPRAPHS 102
+ + P+ PP P P +
Sbjct: 702 FSSIAPPT----PPTPGTPRN 718
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = -1
Query: 699 PVRERRLHRTRGDPLREDSXYRSVSLGKGPVHEVVVLSKDPQSVLTWDFDVLRHGIAFTV 520
PV E+ + DPL S Y S + +G EVV+ + VLTWDFDVL++ F++
Sbjct: 509 PVEEQEGASSSEDPLH--STYTSTATWRGYPVEVVIPIETAGCVLTWDFDVLKNDCEFSL 566
>Z35639-8|CAI46560.1| 634|Caenorhabditis elegans Hypothetical
protein D2045.1b protein.
Length = 634
Score = 34.3 bits (75), Expect = 0.099
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -2
Query: 212 SSLQSGAGGFSCLSGKSTGSSCPSRWCEPPPPRAPHSSLAGGPHHETGH 66
SS S +G S SG+ +GS P PPPP+ H PHH H
Sbjct: 442 SSNASHSGSTSSQSGQRSGSP-PGAVPPPPPPQQQHQQQQHPPHHAPPH 489
>Z35639-7|CAA84697.3| 959|Caenorhabditis elegans Hypothetical
protein D2045.1a protein.
Length = 959
Score = 34.3 bits (75), Expect = 0.099
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -2
Query: 212 SSLQSGAGGFSCLSGKSTGSSCPSRWCEPPPPRAPHSSLAGGPHHETGH 66
SS S +G S SG+ +GS P PPPP+ H PHH H
Sbjct: 767 SSNASHSGSTSSQSGQRSGSP-PGAVPPPPPPQQQHQQQQHPPHHAPPH 814
>AY571963-1|AAS78587.1| 959|Caenorhabditis elegans ATX-2 protein.
Length = 959
Score = 34.3 bits (75), Expect = 0.099
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -2
Query: 212 SSLQSGAGGFSCLSGKSTGSSCPSRWCEPPPPRAPHSSLAGGPHHETGH 66
SS S +G S SG+ +GS P PPPP+ H PHH H
Sbjct: 767 SSNASHSGSTSSQSGQRSGSP-PGAVPPPPPPQQQHQQQQHPPHHAPPH 814
>AF016448-10|ABR92607.1| 849|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform b protein.
Length = 849
Score = 32.7 bits (71), Expect = 0.30
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +1
Query: 400 SPSRQPFRSSTERPSSAPPPTHNAELTSS 486
SPSR P +S+ R SS+P P+ + E+TSS
Sbjct: 694 SPSRTPSPASSPRASSSPGPSRDDEVTSS 722
>AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform a protein.
Length = 1085
Score = 32.7 bits (71), Expect = 0.30
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +1
Query: 400 SPSRQPFRSSTERPSSAPPPTHNAELTSS 486
SPSR P +S+ R SS+P P+ + E+TSS
Sbjct: 930 SPSRTPSPASSPRASSSPGPSRDDEVTSS 958
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 0.92
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -2
Query: 191 GGFSCLSGKSTGSSCPSRWCEPPPPRAPHSSLAGGP 84
GG +SG P C PPPP P GGP
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 784
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 0.92
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -2
Query: 191 GGFSCLSGKSTGSSCPSRWCEPPPPRAPHSSLAGGP 84
GG +SG P C PPPP P GGP
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 784
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 0.92
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -2
Query: 191 GGFSCLSGKSTGSSCPSRWCEPPPPRAPHSSLAGGP 84
GG +SG P C PPPP P GGP
Sbjct: 332 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 367
>Z77658-2|CAB01156.1| 457|Caenorhabditis elegans Hypothetical
protein F14D7.2 protein.
Length = 457
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 409 RQPFRSSTERPSSAPPPTHNAELTSSTGLWSSCS 510
R P RS + PSS+ PP + + W SCS
Sbjct: 76 RSPRRSKSAPPSSSNPPASASTFLETVKNWFSCS 109
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = -2
Query: 221 GSMSSLQSGAGGFSCLSGKSTGSSCPSRWCEPPPPRAPHSSLAGGPHHETGHG 63
G G G S G S ++ P PPPP AP +GG + E G
Sbjct: 277 GGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSG 329
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = -2
Query: 221 GSMSSLQSGAGGFSCLSGKSTGSSCPSRWCEPPPPRAPHSSLAGGPHHETGHG 63
G G G S G S ++ P PPPP AP +GG + E G
Sbjct: 277 GGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSG 329
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,437,090
Number of Sequences: 27780
Number of extensions: 246327
Number of successful extensions: 1343
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1332
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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