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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_F20
         (885 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0292 - 32886148-32886354,32886997-32887154,32887265-328873...    89   3e-18
03_05_1105 + 30438140-30438350,30438448-30438926                       89   4e-18
03_06_0293 - 32889813-32890019,32890144-32890301,32891310-328914...    82   7e-16
07_01_0554 - 4121692-4121895,4121991-4122148,4123241-4123354,412...    77   2e-14
05_04_0254 - 19444409-19444621,19444724-19444887,19444974-194450...    69   5e-12
07_01_0553 - 4119782-4119988,4120160-4120320,4120861-4121155           66   5e-11
11_06_0192 + 21128298-21128829,21129341-21129407,21131169-211312...    54   2e-07
01_01_0167 + 1422344-1424260,1424338-1424472,1424568-1424990,142...    33   0.40 
06_03_1089 - 27521291-27522124                                         32   0.70 
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485...    31   0.93 
02_01_0195 + 1327071-1327187,1328060-1328203,1328340-1328431,132...    31   1.2  
01_06_0464 + 29571791-29572240                                         29   3.8  
10_08_0611 - 19213994-19214053,19214776-19215732                       29   5.0  
08_02_0644 - 19658270-19658626,19659142-19659218,19659256-196594...    29   5.0  
02_05_1332 + 35758657-35758728,35758959-35760689                       29   5.0  
10_07_0172 + 13804803-13805293,13805423-13805537,13805766-138058...    29   6.6  
09_04_0713 - 19675437-19675551,19675872-19676017,19676226-196762...    29   6.6  
08_02_0846 - 21811156-21811833,21811960-21812055,21812157-218122...    29   6.6  
04_04_0589 + 26449184-26450500,26452220-26452310,26452428-264525...    29   6.6  
01_02_0009 - 10135444-10135536,10135860-10135909,10136292-101369...    29   6.6  
10_06_0149 + 11264263-11264547,11264664-11264972                       28   8.7  
03_02_0470 + 8723772-8724705,8724900-8724971,8725315-8725376           28   8.7  

>03_06_0292 -
           32886148-32886354,32886997-32887154,32887265-32887378,
           32887660-32887924
          Length = 247

 Score = 89.4 bits (212), Expect = 3e-18
 Identities = 55/160 (34%), Positives = 86/160 (53%), Gaps = 4/160 (2%)
 Frame = -1

Query: 774 AQNPFMFWVXFIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAAQSFLLGISASVYEADA 595
           A+ P +     I++I  LI M      R K P N  FL +FT   SF +G+         
Sbjct: 70  ARTPEVLVAYVIIIISPLIMMLPMIYFRNKHPINLFFLLLFTVCISFSVGLGCLSKNGTV 129

Query: 594 VLMAVGITAAVCLGLTLF---ALQTKWDFTMMGGVLLCATIVLLVFGIVAIFV-KGKVIT 427
           +  A G+TAA+ +GLT +   A +  +DF  +G  L  AT+VL ++ I+ IF+  G+   
Sbjct: 130 IFQAAGMTAAIVIGLTCYTFWAAKRGYDFEFLGPFLFAATLVLFLYAIITIFLPMGRTGK 189

Query: 426 LVYASLGALIFSIYLVYDTQLMMGGKHKYSISPEEYIFAA 307
           LVY  + ALIFS +++YDT  ++  ++ Y    +EY+ AA
Sbjct: 190 LVYGCVAALIFSGFIIYDTDNLI-KRYTY----DEYVAAA 224


>03_05_1105 + 30438140-30438350,30438448-30438926
          Length = 229

 Score = 89.0 bits (211), Expect = 4e-18
 Identities = 51/166 (30%), Positives = 93/166 (56%), Gaps = 4/166 (2%)
 Frame = -1

Query: 792 PTKVWXAQNPFMFWVXFIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAAQSFLLGISAS 613
           P  ++    P  F +   ++I+  I +       ++ P N + LA+FTAA SF +G++ +
Sbjct: 46  PVALFFVSTPAGFALYIFLIILPFIVLCPLYYYYQRHPVNLLLLALFTAAISFAVGLTCA 105

Query: 612 VYEADAVLMAVGITAAVCLGLTLF---ALQTKWDFTMMGGVLLCATIVLLVFGIVAIFVK 442
             + + +L +  +TAAV + LT +   A +   DF+ +G  L  A ++L+VF ++ +F  
Sbjct: 106 FTKGEVILESAILTAAVVVSLTAYTFWAARRGHDFSFLGPFLFAAVMILMVFALIQVFFP 165

Query: 441 -GKVITLVYASLGALIFSIYLVYDTQLMMGGKHKYSISPEEYIFAA 307
            G+V  ++Y  L AL+F  Y+VYDT  ++    +YS   +EY++AA
Sbjct: 166 LGRVSLMIYGGLAALVFCGYIVYDTDNLI---KRYSY--DEYVWAA 206


>03_06_0293 -
           32889813-32890019,32890144-32890301,32891310-32891423,
           32891531-32891777
          Length = 241

 Score = 81.8 bits (193), Expect = 7e-16
 Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 4/154 (2%)
 Frame = -1

Query: 756 FWVXFIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAAQSFLLGISASVYEADAVLMAVG 577
           F +   +L + LI +       +K P N + L +FT A SF +G++ +      +  A  
Sbjct: 70  FALYIFLLFLPLIVLCPLRYYHQKHPVNLLLLGLFTVAISFAVGMTCAYTSGKVIFEAAA 129

Query: 576 ITAAVCLGLTLF---ALQTKWDFTMMGGVLLCATIVLLVFGIVAIFVK-GKVITLVYASL 409
           +TA V + LT +   A +   DF  +G  L  A +VL++F ++ IF   GK+  ++Y  L
Sbjct: 130 LTAVVVISLTAYTFWAAKRGHDFNFLGPFLFSAVMVLILFSLIQIFFPLGKISEMIYGGL 189

Query: 408 GALIFSIYLVYDTQLMMGGKHKYSISPEEYIFAA 307
            +L+FS Y++YDT  ++  ++ Y    +EY++AA
Sbjct: 190 ASLVFSGYIIYDTDNII-KRYTY----DEYVWAA 218


>07_01_0554 -
           4121692-4121895,4121991-4122148,4123241-4123354,
           4123824-4124082
          Length = 244

 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 47/150 (31%), Positives = 81/150 (54%), Gaps = 6/150 (4%)
 Frame = -1

Query: 738 VLIVCLIAMACCP--DVRRKAPTNFIFLAIFTAAQSFLLGISASVYEADAVLMAVGITAA 565
           + ++ L  +  CP     +K P N I L +FT A SF +G++ +      +L +  +T  
Sbjct: 78  IFLIILPFIVLCPLYYYHQKHPVNLILLGLFTVAISFAVGMTCAFTSGKVILESAILTTV 137

Query: 564 VCLGLTLF---ALQTKWDFTMMGGVLLCATIVLLVFGIVAI-FVKGKVITLVYASLGALI 397
           V   LT +   A +   DF+ +G  L  + IVLLVF  + I F  G++  ++Y  + +LI
Sbjct: 138 VVFSLTAYTFWAAKRGRDFSFLGPFLFASLIVLLVFAFIQILFPLGRISQMIYGGIASLI 197

Query: 396 FSIYLVYDTQLMMGGKHKYSISPEEYIFAA 307
           FS Y+VYDT  ++  ++ Y    ++Y++AA
Sbjct: 198 FSGYIVYDTDNII-KRYTY----DQYVWAA 222


>05_04_0254 -
           19444409-19444621,19444724-19444887,19444974-19445087,
           19446086-19446395
          Length = 266

 Score = 68.9 bits (161), Expect = 5e-12
 Identities = 42/151 (27%), Positives = 82/151 (54%), Gaps = 6/151 (3%)
 Frame = -1

Query: 741 IVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAAQSFLLGISASVYEADAVLMAVGITAAV 562
           ++ ++  + M      + K P NF++L +FT   SF +G++ +  +   VL A+ +T+AV
Sbjct: 96  VLAVLPFVLMVPLYHYQHKHPHNFVYLGLFTLCLSFSIGVACANTQGKIVLEALILTSAV 155

Query: 561 CLGLTLF---ALQTKWDFTMMGGVLLCATIVLLVFGIV---AIFVKGKVITLVYASLGAL 400
              LT +   A +   +F  +G +L  A ++L+V   +     F  G     ++  LGAL
Sbjct: 156 VASLTAYTFWASKKGKEFGYLGPILFSALVLLVVISFIQASVFFPLGSGPVALFGGLGAL 215

Query: 399 IFSIYLVYDTQLMMGGKHKYSISPEEYIFAA 307
           +FS +++YDT+ ++  +H Y    ++YI+A+
Sbjct: 216 VFSGFIIYDTENLI-KRHTY----DDYIWAS 241


>07_01_0553 - 4119782-4119988,4120160-4120320,4120861-4121155
          Length = 220

 Score = 65.7 bits (153), Expect = 5e-11
 Identities = 48/150 (32%), Positives = 82/150 (54%), Gaps = 5/150 (3%)
 Frame = -1

Query: 741 IVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAA-QSFLLGISASVYEADAVLMAVGITAA 565
           +V +    A+   P +RR       FLA   A+  +F+L I A +    A++ A  +T  
Sbjct: 59  VVTVAIAAAVYSVPAIRR------FFLARTPASLAAFVLVIVAPLIAGIAIIEAASLTFG 112

Query: 564 VCLGLTLF---ALQTKWDFTMMGGVLLCATIVLLVFGIVAIFVK-GKVITLVYASLGALI 397
           +  GLTL+   A +   DF+ +   L+ A +VL+++G++ + V  GKV T VY  + AL+
Sbjct: 113 LVFGLTLYTFWAAKRGHDFSFLRPFLVAAFLVLVLYGLIQMLVPTGKVATTVYGCVAALV 172

Query: 396 FSIYLVYDTQLMMGGKHKYSISPEEYIFAA 307
           FS +++YDT  ++  +H Y    +EY+ AA
Sbjct: 173 FSGFIIYDTDNLI-KRHAY----DEYVTAA 197


>11_06_0192 +
           21128298-21128829,21129341-21129407,21131169-21131211,
           21131301-21131367,21131613-21131770,21131863-21132057
          Length = 353

 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
 Frame = -1

Query: 615 SVYEADAVLMAVGITAAVCLGLTLF---ALQTKWDFTMMGGVLLCATIVLLVFGIVAI-F 448
           +V +   VL A  +TA   +GLT+F   A     DFT M   L  + +VLL + I+ I F
Sbjct: 233 AVTDGKVVLQAAILTAVAVIGLTIFTFWAAHRGHDFTFMYPFLAASLLVLLAYLIIQICF 292

Query: 447 VKGKVITLVYASLGALIFSIYLVYDTQLMMGGKHKYSISPEEYIFAA 307
             G+    +Y  L  ++FS ++V+DT  ++  +H Y+    EY+ AA
Sbjct: 293 PLGRAGMTIYGCLATVLFSAFIVFDTNQLI-KRHTYN----EYVIAA 334


>01_01_0167 +
           1422344-1424260,1424338-1424472,1424568-1424990,
           1425183-1425252,1425356-1425495,1425620-1425679,
           1425776-1425931,1426272-1426541
          Length = 1056

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
 Frame = +1

Query: 316 DVLLGRDAVLVLAPHHQL-GVVDEVNGEYESAQGRVHERYDLTFHEYRHDTEYKEDDGGA 492
           D+ + R+ V+ L       G+V EV GEY+S +G + +  D    E+ H + ++ ++GGA
Sbjct: 32  DIFIYREDVVSLKSKEDTRGLVLEVAGEYDS-EGSITDD-DTDTEEHEHKSSHRTENGGA 89

Query: 493 EQHAAHHG 516
           +     +G
Sbjct: 90  DGDNVSNG 97


>06_03_1089 - 27521291-27522124
          Length = 277

 Score = 31.9 bits (69), Expect = 0.70
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = -3

Query: 610 LRSGCGADGSWHNGGRVPGPDSVRSADQVGLHHDGRRAALRHHRPP 473
           ++ G G D S   GG  P P    S  +   H  G+   LR+HRPP
Sbjct: 1   MQGGGGGDSSGGGGGEAPRPSRYESQKRRDWHTFGQ--YLRNHRPP 44


>05_03_0235 -
           10747649-10748118,10748226-10748314,10748477-10748574,
           10748934-10749046,10749107-10749200,10749557-10749589,
           10749734-10749851,10750110-10750210,10751036-10751233,
           10751337-10751471,10751752-10751830,10753650-10753738,
           10753835-10753987,10754100-10754285
          Length = 651

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 37/158 (23%), Positives = 53/158 (33%), Gaps = 14/158 (8%)
 Frame = +1

Query: 319 VLLGRDAVLVLAPHHQLGVVD--------EVNGEYESAQGRVHERYDLTFHEYRHDTEYK 474
           +LL   AV+ L   HQ G+ D        E + +Y + +     R+    H++RH   + 
Sbjct: 490 LLLIPAAVVFLWLLHQEGLFDPLYDWWGLEPDDDYRARRRHQKGRHHRHHHDHRHRHGHS 549

Query: 475 EDD------GGAEQHAAHHGEVPLGLQSEQSQAQAHGRRYANCHQHRIRFVDACANAEQE 636
             D      GG  Q   HH      ++      Q H       H      V A   A   
Sbjct: 550 HGDHHHHYHGGHHQRRRHHHPPAWDVEGHHHDRQQHSHEAGRNHHRGYGEVVAAGAAPLR 609

Query: 637 ALRCREDGQEYEVRRSFASHVGTARHRDETDYQHYEGH 750
             R    GQ  EV          +RH     + H +GH
Sbjct: 610 LDRASRPGQT-EVDAVVEYRERRSRHERHGGHGHRDGH 646


>02_01_0195 +
           1327071-1327187,1328060-1328203,1328340-1328431,
           1329393-1329579,1329676-1329831,1329959-1330012
          Length = 249

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
 Frame = -1

Query: 597 AVLMAVGITAAVCLG-LTLFALQTKW-DFTMMGGVLLCATIVLLVFGIVA-IFVKGKVIT 427
           ++L+   +  A+  G  T  A+  K  ++  +GG+L     +LL     A IF       
Sbjct: 118 SILVTAFVGTAIAFGCFTCAAIVAKRREYLYLGGLLSSGLSILLWLQFAASIFGHSTGSF 177

Query: 426 LVYASLGALIFSIYLVYDTQLMMGGKH 346
           +     G LIF  Y+VYDTQ ++   H
Sbjct: 178 MFEVYFGLLIFLGYMVYDTQEIIERAH 204


>01_06_0464 + 29571791-29572240
          Length = 149

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
 Frame = -3

Query: 649 GSAELPARH*RKRLRSGCGADGSWHNGGRVPGPDSVR-SADQVGLHHDGRRAALRH 485
           G  EL   H R R R+G    G    GG VPG    R S       H G  A  RH
Sbjct: 64  GGGELRGLHRRVRHRAGLLRAGEEGTGGAVPGVGRRRGSTSAASRPHGGGEAYRRH 119


>10_08_0611 - 19213994-19214053,19214776-19215732
          Length = 338

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
 Frame = -3

Query: 850 LMCQLMVTMGFIXLFLYHRXDQSLX-GPKSLHVLGXLHSADSLSHRDGVLSRRETQSSDE 674
           L   ++VT+  + + +  R       GPK L ++G +   D L+HR      +E      
Sbjct: 16  LSLAIVVTVAVLIMRMQRRRAAPFPPGPKPLPIVGNMAMMDQLTHRGLAALAKEYGGLMH 75

Query: 673 LHIPGHLHGSAELPARH*RKRLRSGCGA 590
           L + G LH  A     + R+ L++  GA
Sbjct: 76  LRL-GRLHAFAVSTPEYAREVLQAQDGA 102


>08_02_0644 -
           19658270-19658626,19659142-19659218,19659256-19659430,
           19659543-19659596,19659691-19659858,19660756-19660953,
           19661546-19661632,19661739-19661827,19662499-19662955
          Length = 553

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
 Frame = -3

Query: 685 SSDELHIPGHLHGSAELPARH*RKRLRSGCGADGSWHNGG---RVPGPDSVRSADQVGLH 515
           +S  L  P     +   PA   RKR++SG GA     N G      G D     +QV   
Sbjct: 14  ASKSLSFPAAAQSNKGTPAA--RKRIKSGGGAREKKENSGGAREEQGKDDSVGEEQVQRR 71

Query: 514 HDGRR 500
            DGRR
Sbjct: 72  RDGRR 76


>02_05_1332 + 35758657-35758728,35758959-35760689
          Length = 600

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +1

Query: 610 DACANAEQEALRCREDGQEYEVRRSFASHVGTARHRDETDYQHYE 744
           D  A A  +A R  E+ Q+ E    +   +      +E DYQ YE
Sbjct: 535 DIAAEAADDASRELEEQQDVETAEEYDYEMDDVNAAEENDYQEYE 579


>10_07_0172 +
           13804803-13805293,13805423-13805537,13805766-13805831,
           13805921-13806009,13806103-13806193,13806312-13806458,
           13806575-13806667,13806745-13806846,13806957-13807541,
           13808523-13808813,13808866-13808937
          Length = 713

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
 Frame = +1

Query: 421 HERYDLTFHEYRHDTEYKEDDGGAEQHAAHHGEVPLGLQSEQS---QAQAHGRRYANCHQ 591
           H+   L   E   D  +     GA  H  H G+  LG+ + Q+    +QA    Y N  Q
Sbjct: 631 HDETVLVVEELHSDLGHLTPGAGAAHHLHHDGKFDLGIHAAQAGSIYSQAKLMFYTN--Q 688

Query: 592 HRIRF 606
            +IRF
Sbjct: 689 QQIRF 693


>09_04_0713 -
           19675437-19675551,19675872-19676017,19676226-19676259,
           19676333-19676473,19676860-19676924,19677022-19677108,
           19677186-19677254,19677457-19677548,19677781-19677853,
           19678129-19678205,19678490-19678684,19678804-19678861,
           19679423-19679517,19680071-19680191
          Length = 455

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
 Frame = -1

Query: 672 FIFLAIFTAAQSFLLGISASVYEADAVLMAVGITAAVC-LGLTLFALQTKWDFTMMGGVL 496
           F+ L I     ++++ + A  Y +   +M +   A  C + LT   L+TK+      GV+
Sbjct: 78  FLILGIVDVEANYIV-VKAYQYTSLTSVMLIDCWAIPCVILLTWVFLKTKYGLRKFIGVV 136

Query: 495 LCAT-IVLLVFGIV 457
           +C   I+L+VF  V
Sbjct: 137 ICVAGIILVVFSDV 150


>08_02_0846 -
           21811156-21811833,21811960-21812055,21812157-21812267,
           21812367-21812743,21814699-21814734,21815236-21815839
          Length = 633

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = -1

Query: 639 SFLLGISASVYEADAVLMAVGITAAVCLGLTLFALQTKWDFTMMGGV-LLCATIVLLVFG 463
           + L  ++ +V +ADA L AV         LT+F  Q KW  T   GV L+  T+ ++ FG
Sbjct: 183 ALLASMARNVSQADAALKAVYSRT-----LTVFTAQGKWQRTKYVGVSLVGKTLAVMGFG 237

Query: 462 IV 457
            V
Sbjct: 238 KV 239


>04_04_0589 +
           26449184-26450500,26452220-26452310,26452428-26452585,
           26452670-26452768,26453296-26453345,26453654-26453705,
           26453773-26454058,26454286-26454400,26454938-26455020,
           26455381-26455466
          Length = 778

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -3

Query: 721 HRDGVLSRRETQSSDELHIPGHLHGSAELPAR 626
           HR  +L  R++ SSD L  P H+   +E P +
Sbjct: 390 HRARILETRKSASSDRLMFPEHVFALSEKPVK 421


>01_02_0009 -
           10135444-10135536,10135860-10135909,10136292-10136901,
           10137891-10138151
          Length = 337

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
 Frame = -1

Query: 588 MAVGITAAVCLGLTLFAL-QTKWDFTMMG--GVLLCATIVLLVFGIVAIFVKGKVITLVY 418
           M+ GIT  +  GL LF   +  +D   +G  GVL    +VL  +    +F+ G VI   Y
Sbjct: 140 MSQGITLLLSKGLLLFGNDEAYYDQYAVGFSGVLFGMKVVLNAWSDDYVFLHGVVIPAKY 199

Query: 417 ASLGALIFSIYLVYDTQLM--MGG 352
           A+   L+     +  T L+  +GG
Sbjct: 200 AAWAELLLIQAFIPGTSLIGHLGG 223


>10_06_0149 + 11264263-11264547,11264664-11264972
          Length = 197

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +1

Query: 454 RHDTEYKEDDGGAEQHAAHHGEVPLGLQSEQSQ 552
           RHD   +  DGG E+H+   G+VP G  S +++
Sbjct: 166 RHDQRGQRHDGGDEEHSG--GKVPQGQDSGEAR 196


>03_02_0470 + 8723772-8724705,8724900-8724971,8725315-8725376
          Length = 355

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
 Frame = +1

Query: 418 VHERYDLT-FHEYRHDTEYKEDDGGAEQHAAHHGEVPLGLQSEQSQAQAHGRRYANCHQH 594
           ++ RY  T F EY  DT   EDDG  E      GE   G   E +QA    + +  C+ +
Sbjct: 270 LNSRYGATVFDEYEDDTN-GEDDGEEEAEELQEGE---GSAEEAAQAMLCCKYHDRCYTY 325


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,054,443
Number of Sequences: 37544
Number of extensions: 425305
Number of successful extensions: 1472
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1459
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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