Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_F19
         (788 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   2.4  
AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    23   4.3  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    23   4.3  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   5.7  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.9  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   9.9  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 12/47 (25%), Positives = 12/47 (25%)
 Frame = +2

Query: 566 PXPXXXPRXPXXPPXXXXXPPPXXTXPTXXXPXXPPPXXPPTXXXXP 706
           P P   P      P     P P    P    P  PP   P      P
Sbjct: 21  PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNPSQMMISP 67


>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 131 NLKGSILQPRPRMEVPCSWD 72
           NL  ++LQPRP  E+  + D
Sbjct: 25  NLVNTVLQPRPSFELSKNGD 44


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 131 NLKGSILQPRPRMEVPCSWD 72
           NL  ++LQPRP  E+  + D
Sbjct: 27  NLVNTVLQPRPSFELSKNGD 46


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +3

Query: 660 PPAPXPXPPXP 692
           PP P P PP P
Sbjct: 338 PPKPAPPPPPP 348


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -1

Query: 152 APTRSFYNLKGSILQPRPRMEVPCS 78
           AP    Y+     LQP P + + CS
Sbjct: 420 APPMLLYSFIEQTLQPGPAVSLKCS 444


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -1

Query: 152 APTRSFYNLKGSILQPRPRMEVPCS 78
           AP    Y+     LQP P + + CS
Sbjct: 420 APPMLLYSFIEQTLQPGPAVSLKCS 444


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = +1

Query: 40  YCXSALLYNITSQEHGTSIRGRGCSMDPFRL*KDRV 147
           Y    + YN  ++ H T     G S DP  +   R+
Sbjct: 530 YWNCVIQYNTRAENHQTGTAKMGPSYDPMAVVSPRL 565


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,554
Number of Sequences: 438
Number of extensions: 4093
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)