Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_F17
         (824 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p pro...   227   1e-59
AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA ...   227   1e-59
DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosom...   225   4e-59
AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal pr...   221   1e-57
BT021430-1|AAX33578.1|  290|Drosophila melanogaster GM06171p pro...    56   4e-08
BT003457-1|AAO39460.1|  985|Drosophila melanogaster RH34107p pro...    31   2.5  
AE014297-1126|AAF54512.1|  985|Drosophila melanogaster CG3999-PA...    31   2.5  

>BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p
           protein.
          Length = 269

 Score =  227 bits (555), Expect = 1e-59
 Identities = 104/136 (76%), Positives = 119/136 (87%)
 Frame = -1

Query: 461 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 282
           A K Q+K++KG  G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 134 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 193

Query: 281 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRL 102
           LT+EAAMKKIEDNNTLVF+ H  ANK+H++AAV+KLYDI VAKVN LIRPDG+KKAYVRL
Sbjct: 194 LTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRL 253

Query: 101 ARDYDALDVANKIGII 54
           ARDYDALD+ANKIGII
Sbjct: 254 ARDYDALDIANKIGII 269


>AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA
           protein.
          Length = 277

 Score =  227 bits (555), Expect = 1e-59
 Identities = 104/136 (76%), Positives = 119/136 (87%)
 Frame = -1

Query: 461 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 282
           A K Q+K++KG  G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 201

Query: 281 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRL 102
           LT+EAAMKKIEDNNTLVF+ H  ANK+H++AAV+KLYDI VAKVN LIRPDG+KKAYVRL
Sbjct: 202 LTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRL 261

Query: 101 ARDYDALDVANKIGII 54
           ARDYDALD+ANKIGII
Sbjct: 262 ARDYDALDIANKIGII 277


>DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosomal
           protein naturalvariant protein.
          Length = 277

 Score =  225 bits (551), Expect = 4e-59
 Identities = 104/136 (76%), Positives = 118/136 (86%)
 Frame = -1

Query: 461 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 282
           A K Q+K++KG  G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRANVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 201

Query: 281 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRL 102
           LT+EAAMKKIEDNNTLVF+ H  ANK H++AAV+KLYDI VAKVN LIRPDG+KKAYVRL
Sbjct: 202 LTTEAAMKKIEDNNTLVFLTHLRANKSHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRL 261

Query: 101 ARDYDALDVANKIGII 54
           ARDYDALD+ANKIGII
Sbjct: 262 ARDYDALDIANKIGII 277


>AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal
           protein L23a protein.
          Length = 269

 Score =  221 bits (539), Expect = 1e-57
 Identities = 103/136 (75%), Positives = 118/136 (86%)
 Frame = -1

Query: 461 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 282
           A K Q+K++K   G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 135 AKKVQKKIIKA-FGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 193

Query: 281 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRL 102
           LT+EAAMKKIEDNNTLVF+ H  ANK+H++AAV+KLYDI VAKVN LIRPDG+KKAYVRL
Sbjct: 194 LTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRL 253

Query: 101 ARDYDALDVANKIGII 54
           ARDYDALD+ANKIGII
Sbjct: 254 ARDYDALDIANKIGII 269


>BT021430-1|AAX33578.1|  290|Drosophila melanogaster GM06171p
           protein.
          Length = 290

 Score = 56.4 bits (130), Expect = 4e-08
 Identities = 33/102 (32%), Positives = 52/102 (50%)
 Frame = -3

Query: 345 IPKEVSA*EKSHGCLQHH*IPSHV*SSNEED*R*QHLGLYCSHKCKQAPYQGCGQETL*Y 166
           +P+E+ A ++ HG +QHH +P+     +EED   QH GL  +   +Q P      + L +
Sbjct: 163 VPQEIGAHQEPHGRVQHHQVPTDHRGGHEEDRGQQHPGLPHTPARQQEPRACRSAQALRH 222

Query: 165 KCC*SQHTHQA*W*EESVXXXXXXXXRIGRCQQNWHHINCSI 40
           +    +  H A W EE +        R G CQQ+ HHI+ +I
Sbjct: 223 QGGQGERAHPARWPEEGLCAPGARLRRPGHCQQDRHHISAAI 264


>BT003457-1|AAO39460.1|  985|Drosophila melanogaster RH34107p
           protein.
          Length = 985

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 423 MFTFYNLPLSLKCFSNRFHYFFLSLNPSLFG 515
           M+  Y+ P  LK  +NR H+F L+L   + G
Sbjct: 368 MYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398


>AE014297-1126|AAF54512.1|  985|Drosophila melanogaster CG3999-PA
           protein.
          Length = 985

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 423 MFTFYNLPLSLKCFSNRFHYFFLSLNPSLFG 515
           M+  Y+ P  LK  +NR H+F L+L   + G
Sbjct: 368 MYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,658,775
Number of Sequences: 53049
Number of extensions: 525804
Number of successful extensions: 1558
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1558
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3901127880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)