Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_F13
(739 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_03_0094 + 14378953-14380728 152 2e-37
07_03_1408 - 26353389-26355191 151 4e-37
10_02_0195 + 6578384-6578629,6578710-6579300,6586302-6587512,658... 32 0.55
12_01_0400 + 3169597-3170504,3170510-3171269 29 2.9
02_04_0562 - 23886272-23886357,23886456-23886571,23887045-238871... 29 2.9
05_05_0071 - 22159793-22159809,22159893-22159953,22160041-221602... 29 5.1
01_01_0875 + 6856440-6857195,6858670-6858918,6859025-6859147,685... 29 5.1
05_06_0212 + 26410330-26410419,26410562-26410846,26411005-264112... 28 6.7
>03_03_0094 + 14378953-14380728
Length = 591
Score = 152 bits (369), Expect = 2e-37
Identities = 62/99 (62%), Positives = 88/99 (88%)
Frame = -2
Query: 633 AHKRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIVIVTTKGEAVALAVALMTTST 454
++KR+ +KDSAVNA+CYGAK+++PG+LR+E+ IEV +E+V++TTKGEA+A+ +A MTT+
Sbjct: 313 SYKRLVVKDSAVNAICYGAKLMIPGLLRFENEIEVGEEVVLMTTKGEAIAIGIAEMTTAV 372
Query: 453 MASCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILI 337
MA+CDHG AK+KRV+M+RDTYPRKWGLGP A +KK ++
Sbjct: 373 MATCDHGAVAKIKRVVMDRDTYPRKWGLGPVALKKKKMV 411
Score = 50.8 bits (116), Expect = 1e-06
Identities = 18/30 (60%), Positives = 26/30 (86%)
Frame = -3
Query: 737 MVTMHDILDAQWSYENHQDETYLRRVIKPL 648
MVTMHD++DA+W+ +N DE+YLRR++ PL
Sbjct: 278 MVTMHDVMDARWAMDNFNDESYLRRIVMPL 307
Score = 42.7 bits (96), Expect = 3e-04
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = -3
Query: 353 RKKSSYXQGKLDKYGKPNENTPKEWLNSYV 264
+KK +G LDK+GKPNE TP EWL + V
Sbjct: 406 KKKKMVAEGLLDKHGKPNEKTPSEWLRNAV 435
>07_03_1408 - 26353389-26355191
Length = 600
Score = 151 bits (367), Expect = 4e-37
Identities = 61/99 (61%), Positives = 88/99 (88%)
Frame = -2
Query: 633 AHKRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIVIVTTKGEAVALAVALMTTST 454
++KR+ +KDSAVNA+CYGAK+++PG+LR+E+ I+V +E+V++TTKGEA+A+ +A MTT+
Sbjct: 309 SYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIDVGEEVVLMTTKGEAIAIGIAEMTTAV 368
Query: 453 MASCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILI 337
MA+CDHG AK+KRV+M+RDTYPRKWGLGP A +KK ++
Sbjct: 369 MATCDHGAVAKIKRVVMDRDTYPRKWGLGPVALKKKKMV 407
Score = 53.6 bits (123), Expect = 2e-07
Identities = 19/30 (63%), Positives = 27/30 (90%)
Frame = -3
Query: 737 MVTMHDILDAQWSYENHQDETYLRRVIKPL 648
MVTMHD++DA+W+ +N+ DETYLRR++ PL
Sbjct: 274 MVTMHDVMDARWAMDNYNDETYLRRIVMPL 303
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = -3
Query: 353 RKKSSYXQGKLDKYGKPNENTPKEWLNS 270
+KK +G LDK+GKPNE TP EW+ +
Sbjct: 402 KKKKMVAEGLLDKHGKPNEKTPAEWIRN 429
>10_02_0195 +
6578384-6578629,6578710-6579300,6586302-6587512,
6587593-6587844,6587932-6588042,6588133-6588214,
6588299-6588382,6588464-6588658
Length = 923
Score = 31.9 bits (69), Expect = 0.55
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = -1
Query: 178 EDPDVSIEVKQEXXXXXXKRDSEAPAEADATMDTSESPETARTTSR*FCAQREEKKK 8
+DPD I +KQ + S E D+ TS SP+T TTS C +++ +K
Sbjct: 72 DDPDY-IPIKQAMATRRRSKRSAVRVEPDSDTATSGSPQTDTTTSGEACPKKKRGEK 127
>12_01_0400 + 3169597-3170504,3170510-3171269
Length = 555
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 353 CEAFGPRPHFLGYVSRSIMTRLSFAATP 436
CEA P H Y +R + R+S AATP
Sbjct: 212 CEATSPVDHLAYYFARGLKLRISGAATP 239
>02_04_0562 -
23886272-23886357,23886456-23886571,23887045-23887127,
23887683-23887829,23887946-23887993,23888166-23888384,
23889370-23889541,23889636-23889700,23890386-23890512,
23891358-23891450,23891520-23891629,23891722-23891868,
23892161-23892473,23892580-23893178
Length = 774
Score = 29.5 bits (63), Expect = 2.9
Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 2/110 (1%)
Frame = -1
Query: 403 GTRHVPQKMGSRTESLTEKNPHTXKGNLTNMANQMRTHQKNG*TVTSTIMLRKNRRMVTV 224
G R + Q G + KG+L + N + +G ++ + + RK +
Sbjct: 44 GQRFLEQSSGDSKWEQGQYGVKLIKGDLLALGNGLLRRPAHGISLPAYGIGRKEFGLPMG 103
Query: 223 XEEGSRK-RTASTANAEDPDVSIEVKQEXXXXXXKRDSEA-PAEADATMD 80
+ RTASTA A P + IE +Q KR EA P E D ++
Sbjct: 104 ARHLLQSVRTASTATAGQPKLDIEDEQSEDQKQNKRKKEASPEECDQAVE 153
>05_05_0071 -
22159793-22159809,22159893-22159953,22160041-22160210,
22160543-22160591
Length = 98
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = -3
Query: 377 GVSDRKPHRKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYNVKK-----EPENGDGVRGR 213
G +D K H + K K PNE++ + S V+Y ++ P+ GD G
Sbjct: 14 GFADGKSHSPTKARGAYKDGKQSYPNESSESPYFGSSVHYGAREFYGNTPPKQGDASPGN 73
Query: 212 QQK 204
Q++
Sbjct: 74 QKE 76
>01_01_0875 +
6856440-6857195,6858670-6858918,6859025-6859147,
6859288-6859479
Length = 439
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/30 (56%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +1
Query: 157 LWRHRDLLR*LCL--PFAFCCLPRTPSPFS 240
LWRHR R LCL P FC LP P P S
Sbjct: 80 LWRHRTYDR-LCLHLPKRFCELPLRPFPAS 108
>05_06_0212 +
26410330-26410419,26410562-26410846,26411005-26411208,
26411636-26411692,26411859-26412926
Length = 567
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Frame = -3
Query: 404 WNETRTPENG-VSDRKPHRKKSSY----XQGKLDKYGKPNENTPKEWLNSYVNYNVKKEP 240
W P+ V+D KPH +K+SY GKL + + + P E + + +K
Sbjct: 248 WRPISHPKRAAVTDAKPHTRKASYAMETESGKLKRNSRRSSAAPVESSQTNIAMETEKSR 307
Query: 239 EN 234
N
Sbjct: 308 RN 309
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,387,036
Number of Sequences: 37544
Number of extensions: 342093
Number of successful extensions: 950
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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