Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_F13
         (739 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92803-7|CAB07244.1|  445|Caenorhabditis elegans Hypothetical pr...   153   1e-37
Z82274-8|CAB05230.3|  467|Caenorhabditis elegans Hypothetical pr...    31   0.85 
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr...    29   3.4  
U21323-7|AAA62551.1|  465|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z47808-7|CAA87771.2|  934|Caenorhabditis elegans Hypothetical pr...    29   4.5  
U80838-6|AAC71115.1|  169|Caenorhabditis elegans Hypothetical pr...    28   6.0  
U41553-5|AAO91694.1|  468|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>Z92803-7|CAB07244.1|  445|Caenorhabditis elegans Hypothetical
           protein K01G5.5 protein.
          Length = 445

 Score =  153 bits (371), Expect = 1e-37
 Identities = 67/99 (67%), Positives = 85/99 (85%)
 Frame = -2

Query: 630 HKRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIVIVTTKGEAVALAVALMTTSTM 451
           HKR+ +KDS +NA+CYGAK+L+PGILRY+D IEV +EIVI++TKGEA+ +A+A M TST+
Sbjct: 284 HKRVVVKDSCINAICYGAKILIPGILRYDDDIEVGKEIVIMSTKGEAICIAIAQMNTSTI 343

Query: 450 ASCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQ 334
           AS DHGV AK KRVIMERD Y RKWGLGP AS+KK +++
Sbjct: 344 ASVDHGVVAKSKRVIMERDVYGRKWGLGPVASKKKQMVK 382



 Score = 48.4 bits (110), Expect = 5e-06
 Identities = 21/54 (38%), Positives = 30/54 (55%)
 Frame = -3

Query: 353 RKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDGVRGRQQKANGK 192
           +KK     G LDK+GKPN+ TPK W   YV  + KKE +  +     +++A  K
Sbjct: 376 KKKQMVKDGLLDKFGKPNDTTPKSWAKEYVQTSTKKEVKKEETPDEEEEEAPKK 429



 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 20/38 (52%), Positives = 30/38 (78%)
 Frame = -3

Query: 737 MVTMHDILDAQWSYENHQDETYLRRVIKPLXAS*LLTK 624
           MVTMHD+LDAQ+  +  +DE+Y+R +++PL A  LLT+
Sbjct: 248 MVTMHDVLDAQYLLDTQKDESYMRHIVRPLEA--LLTQ 283


>Z82274-8|CAB05230.3|  467|Caenorhabditis elegans Hypothetical
           protein JC8.2 protein.
          Length = 467

 Score = 31.1 bits (67), Expect = 0.85
 Identities = 19/62 (30%), Positives = 34/62 (54%)
 Frame = -3

Query: 401 NETRTPENGVSDRKPHRKKSSYXQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDGV 222
           NET   ++  SD +  + K    +G ++   + +E   K+++  Y N N+K EPE  DG+
Sbjct: 46  NETELDDDEESDNE--KLKGLRGRGDVEMKDEESE-FEKKYMKGY-NENIKDEPEGQDGM 101

Query: 221 RG 216
           +G
Sbjct: 102 KG 103


>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
           protein F36F2.3a protein.
          Length = 1128

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
 Frame = -3

Query: 398 ETRTPENGVSDRKPHRKKSSYXQGKLDKYGKPNENTP--KEWLNSYVNYNVKKEPENGDG 225
           E   PEN   D + H+K+       ++   + +E++   K+   S  N    ++ E+GD 
Sbjct: 729 EDEEPENHDEDVEDHKKEKESQSSTINTADEDDESSKKMKKHKKSKKNKKHHRKEEDGDE 788

Query: 224 VRGRQQKANGKH 189
              R++K + KH
Sbjct: 789 DEERKRKKHKKH 800


>U21323-7|AAA62551.1|  465|Caenorhabditis elegans Hypothetical
           protein C45G9.8 protein.
          Length = 465

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
 Frame = -1

Query: 424 ETQACHNGTRHVPQKMGSRTESLTEKNPHTXKGNLTNMANQMRTHQKNG*TVTSTIMLRK 245
           E       T  +P    + ++S TEK   T    +T      +T +++  TVT+T +   
Sbjct: 90  ECATMSTSTHVMPNSSSTISKSATEKKTKTGSKKVTRSKKSKKTKRRSSTTVTTTTI--S 147

Query: 244 NRRMVTV-XEEGSRKRTASTANAEDP 170
           N + VT   ++ S+ +       +DP
Sbjct: 148 NSKPVTPDKDKDSKDQRKQRTKRKDP 173


>Z47808-7|CAA87771.2|  934|Caenorhabditis elegans Hypothetical
           protein D2013.5 protein.
          Length = 934

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/49 (26%), Positives = 23/49 (46%)
 Frame = -3

Query: 344 SSYXQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDGVRGRQQKAN 198
           S   +G  D +G   +N   EW+  +  +  +KE +NG+   G   + N
Sbjct: 129 SQKMKGIKDGFGADGQNKWAEWMAKFEQFKQQKEDQNGNSGGGGGGEGN 177


>U80838-6|AAC71115.1|  169|Caenorhabditis elegans Hypothetical
           protein F47F6.4 protein.
          Length = 169

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 243 FFLNIIVDVTV*PFFWCVLIWFAIFVKF 326
           F  N  ++  V PF W V  WFA  V++
Sbjct: 108 FSANFNIEFKVLPFMWTVCYWFAPLVEY 135


>U41553-5|AAO91694.1|  468|Caenorhabditis elegans Hypothetical
           protein ZK1193.5a protein.
          Length = 468

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = -3

Query: 416 SVS*WNET-RTPENGVSDRKPHRKKSSYXQGKLDKYGKPNENTPKEWLNSYVN 261
           +V+ W +T  T E+  S  +  R  + Y   +LDK+ K + N  K+ +N+Y++
Sbjct: 162 AVNEWLDTLETNEDRRSPTQVQRFNTLYEIPRLDKWFKSDANPSKQKMNNYLS 214


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,643,544
Number of Sequences: 27780
Number of extensions: 300467
Number of successful extensions: 924
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)