Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_F13
         (739 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    25   0.74 
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               25   0.98 
U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    24   1.7  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   2.3  
AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor pro...    22   6.9  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 25.0 bits (52), Expect = 0.74
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 442 RSWCSRETQACHNGT 398
           RSW +RE+Q C+N +
Sbjct: 353 RSWVTRESQICNNSS 367


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 24.6 bits (51), Expect = 0.98
 Identities = 12/51 (23%), Positives = 23/51 (45%)
 Frame = -3

Query: 341 SYXQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDGVRGRQQKANGKH 189
           ++  G + + GKP E T  +  +   N N+K + E  +      ++ N  H
Sbjct: 69  NFVAGGIQQAGKPKEETDDKDDDESDNENIKSQKEFPNSSSSDDERPNSIH 119


>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/35 (34%), Positives = 14/35 (40%)
 Frame = +1

Query: 175 LLR*LCLPFAFCCLPRTPSPFSGSFXXXXXXXXFN 279
           LL  +C  FA+  LP  P P    F        FN
Sbjct: 10  LLATICAAFAYVPLPNVPQPGRRPFPTFPGQGPFN 44


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -1

Query: 115 SEAPAEADATMDTSESPETARTTSR*FCAQREEKKK 8
           SEA A A+++  + ES E   TTS    A++ EK +
Sbjct: 748 SEASANANSSTSSEESREEKATTS--LEAEKREKSE 781


>AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor
           protein.
          Length = 33

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 10/30 (33%), Positives = 11/30 (36%)
 Frame = +1

Query: 190 CLPFAFCCLPRTPSPFSGSFXXXXXXXXFN 279
           C  FA+  LP  P P    F        FN
Sbjct: 1   CAAFAYVPLPNVPQPGRRPFPTFPGQGPFN 30


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,693
Number of Sequences: 438
Number of extensions: 3652
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)