Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_F09
(788 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 243 1e-64
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 243 1e-64
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 243 1e-64
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 243 1e-64
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 243 1e-64
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 243 1e-64
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 243 1e-64
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 243 1e-64
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 243 1e-64
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 237 9e-63
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 232 2e-61
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 131 5e-31
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 107 9e-24
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 103 2e-22
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 86 2e-17
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 84 1e-16
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 65 6e-11
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 65 6e-11
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 1e-05
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.71
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.71
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.71
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 8.8
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 8.8
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 8.8
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 8.8
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 243 bits (594), Expect = 1e-64
Identities = 112/118 (94%), Positives = 115/118 (97%)
Frame = -2
Query: 682 PEXXFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 503
PE FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEI
Sbjct: 259 PEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEI 318
Query: 502 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 329
TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 319 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 48.0 bits (109), Expect = 8e-06
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -1
Query: 737 YEXPDGQVITIGNEKFRCPRGXFPTXVLGYGS 642
YE PDGQVIT+GNE+FRCP F LG S
Sbjct: 241 YELPDGQVITVGNERFRCPEAMFQPSFLGMES 272
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 243 bits (594), Expect = 1e-64
Identities = 112/118 (94%), Positives = 115/118 (97%)
Frame = -2
Query: 682 PEXXFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 503
PE FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEI
Sbjct: 259 PEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEI 318
Query: 502 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 329
TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 319 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 48.0 bits (109), Expect = 8e-06
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -1
Query: 737 YEXPDGQVITIGNEKFRCPRGXFPTXVLGYGS 642
YE PDGQVIT+GNE+FRCP F LG S
Sbjct: 241 YELPDGQVITVGNERFRCPEALFQPSFLGMES 272
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 243 bits (594), Expect = 1e-64
Identities = 112/118 (94%), Positives = 115/118 (97%)
Frame = -2
Query: 682 PEXXFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 503
PE FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEI
Sbjct: 259 PEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEI 318
Query: 502 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 329
TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 319 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 48.0 bits (109), Expect = 8e-06
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -1
Query: 737 YEXPDGQVITIGNEKFRCPRGXFPTXVLGYGS 642
YE PDGQVIT+GNE+FRCP F LG S
Sbjct: 241 YELPDGQVITVGNERFRCPEAMFQPSFLGMES 272
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 243 bits (594), Expect = 1e-64
Identities = 112/118 (94%), Positives = 115/118 (97%)
Frame = -2
Query: 682 PEXXFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 503
PE FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEI
Sbjct: 259 PEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEI 318
Query: 502 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 329
TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 319 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 48.0 bits (109), Expect = 8e-06
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -1
Query: 737 YEXPDGQVITIGNEKFRCPRGXFPTXVLGYGS 642
YE PDGQVIT+GNE+FRCP F LG S
Sbjct: 241 YELPDGQVITVGNERFRCPEALFQPSFLGMES 272
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 243 bits (594), Expect = 1e-64
Identities = 112/118 (94%), Positives = 115/118 (97%)
Frame = -2
Query: 682 PEXXFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 503
PE FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEI
Sbjct: 259 PEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEI 318
Query: 502 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 329
TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 319 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 48.0 bits (109), Expect = 8e-06
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -1
Query: 737 YEXPDGQVITIGNEKFRCPRGXFPTXVLGYGS 642
YE PDGQVIT+GNE+FRCP F LG S
Sbjct: 241 YELPDGQVITVGNERFRCPEALFQPSFLGMES 272
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 243 bits (594), Expect = 1e-64
Identities = 112/118 (94%), Positives = 115/118 (97%)
Frame = -2
Query: 682 PEXXFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 503
PE FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEI
Sbjct: 259 PEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEI 318
Query: 502 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 329
TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 319 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 48.0 bits (109), Expect = 8e-06
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -1
Query: 737 YEXPDGQVITIGNEKFRCPRGXFPTXVLGYGS 642
YE PDGQVIT+GNE+FRCP F LG S
Sbjct: 241 YELPDGQVITVGNERFRCPEAMFQPSFLGMES 272
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 243 bits (594), Expect = 1e-64
Identities = 112/118 (94%), Positives = 115/118 (97%)
Frame = -2
Query: 682 PEXXFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 503
PE FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEI
Sbjct: 215 PEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEI 274
Query: 502 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 329
TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 275 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 332
Score = 48.0 bits (109), Expect = 8e-06
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -1
Query: 737 YEXPDGQVITIGNEKFRCPRGXFPTXVLGYGS 642
YE PDGQVIT+GNE+FRCP F LG S
Sbjct: 197 YELPDGQVITVGNERFRCPEALFQPSFLGMES 228
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 243 bits (594), Expect = 1e-64
Identities = 112/118 (94%), Positives = 115/118 (97%)
Frame = -2
Query: 682 PEXXFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 503
PE FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEI
Sbjct: 245 PEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEI 304
Query: 502 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 329
TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 305 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 362
Score = 48.0 bits (109), Expect = 8e-06
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -1
Query: 737 YEXPDGQVITIGNEKFRCPRGXFPTXVLGYGS 642
YE PDGQVIT+GNE+FRCP F LG S
Sbjct: 227 YELPDGQVITVGNERFRCPEALFQPSFLGMES 258
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 243 bits (594), Expect = 1e-64
Identities = 112/118 (94%), Positives = 115/118 (97%)
Frame = -2
Query: 682 PEXXFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 503
PE FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEI
Sbjct: 259 PEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEI 318
Query: 502 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 329
TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 319 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 48.0 bits (109), Expect = 8e-06
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -1
Query: 737 YEXPDGQVITIGNEKFRCPRGXFPTXVLGYGS 642
YE PDGQVIT+GNE+FRCP F LG S
Sbjct: 241 YELPDGQVITVGNERFRCPEALFQPSFLGMES 272
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 237 bits (579), Expect = 9e-63
Identities = 111/118 (94%), Positives = 114/118 (96%)
Frame = -2
Query: 682 PEXXFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 503
PE FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEI
Sbjct: 259 PEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEI 318
Query: 502 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 329
TALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 319 TALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
Score = 48.0 bits (109), Expect = 8e-06
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -1
Query: 737 YEXPDGQVITIGNEKFRCPRGXFPTXVLGYGS 642
YE PDGQVIT+GNE+FRCP F LG S
Sbjct: 241 YELPDGQVITVGNERFRCPEAMFQPSFLGMES 272
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 232 bits (567), Expect = 2e-61
Identities = 107/118 (90%), Positives = 111/118 (94%)
Frame = -2
Query: 682 PEXXFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 503
PE FQP+F+GME GIHETTY SIMKCDVDIRKDLYANTVLSGGT+M+PGIADRMQKEI
Sbjct: 258 PEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEI 317
Query: 502 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 329
LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 318 QHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1
Query: 737 YEXPDGQVITIGNEKFRCPRGXFPTXVLG 651
YE PDGQVITIGNE+FRCP F +G
Sbjct: 240 YELPDGQVITIGNERFRCPEVLFQPAFIG 268
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 131 bits (317), Expect = 5e-31
Identities = 59/119 (49%), Positives = 82/119 (68%)
Frame = -2
Query: 685 APEXXFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 506
APE F+P +G E G+ SIMKCDVD+R+ LY+N VLSGGTT++ G DR+ E
Sbjct: 256 APEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGE 315
Query: 505 ITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 329
+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+ K+EY++ G S +H++ F
Sbjct: 316 MRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 107 bits (257), Expect = 9e-24
Identities = 47/92 (51%), Positives = 63/92 (68%), Gaps = 3/92 (3%)
Frame = -2
Query: 598 DVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIG 428
D+DIR L++N ++GG ++ G +R+ + P T+K+++ A P ERKY WIG
Sbjct: 344 DIDIRPTLFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIG 403
Query: 427 GSILASLSTFQQMWISKQEYDESGPSIVHRKC 332
GSIL SL TFQQMW+SK EYDESG SIV +KC
Sbjct: 404 GSILGSLGTFQQMWVSKAEYDESGKSIVEKKC 435
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 103 bits (246), Expect = 2e-22
Identities = 53/123 (43%), Positives = 73/123 (59%), Gaps = 13/123 (10%)
Frame = -2
Query: 685 APEXXFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 506
APE FQP + +E G+ E + I D+D R D Y + VLSGGTTMYPG+ R++KE
Sbjct: 261 APEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKE 320
Query: 505 ITAL-----------APSTMKIKIIAPPERKYSVWIGGSILASL--STFQQMWISKQEYD 365
+ L A KI+I APP RK+ V++GG++LA+L Q W+SK+EY+
Sbjct: 321 LKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYE 380
Query: 364 ESG 356
E G
Sbjct: 381 EGG 383
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 743 EXYEXPDGQVITIGNEKFRCPRGXF 669
+ Y PDG+VI +G E+F P F
Sbjct: 242 QQYTLPDGRVIRLGGERFEAPEILF 266
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 86.2 bits (204), Expect = 2e-17
Identities = 35/103 (33%), Positives = 67/103 (65%)
Frame = -2
Query: 679 EXXFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 500
E F+P G++ G+H+ + +I++C +D R+ LY N L+GG ++ PGIA+++++E++
Sbjct: 437 EGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELS 496
Query: 499 ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 371
+ P+T+ ++ P R + ++G I+AS STF+ IS Q+
Sbjct: 497 TVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 83.8 bits (198), Expect = 1e-16
Identities = 47/131 (35%), Positives = 72/131 (54%), Gaps = 17/131 (12%)
Frame = -2
Query: 688 VAPEXXFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQ 512
+ PE F P F E I +T I +C +D+R+ LY N VLSGG+TM+ A ++Q
Sbjct: 284 LGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQ 343
Query: 511 KEITALA----------------PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 380
+++ L+ P + +++I+ ++Y+VW GGS+LAS S F Q+ +
Sbjct: 344 RDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHT 403
Query: 379 KQEYDESGPSI 347
K EY E GPSI
Sbjct: 404 KAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 64.9 bits (151), Expect = 6e-11
Identities = 34/123 (27%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Frame = -2
Query: 682 PEXXFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 503
PE F PS + ++ CG+ E SI +C +R L N ++ GG++ +PG +R+++E+
Sbjct: 273 PEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREV 332
Query: 502 TALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 332
++ P+ + + + P+ W G L L+ + WI+++++DE G S+
Sbjct: 333 RSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGDSLEFSNF 388
Query: 331 F*T 323
F T
Sbjct: 389 FQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 64.9 bits (151), Expect = 6e-11
Identities = 34/123 (27%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Frame = -2
Query: 682 PEXXFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 503
PE F PS + ++ CG+ E SI +C +R L N ++ GG++ +PG +R+++E+
Sbjct: 273 PEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREV 332
Query: 502 TALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 332
++ P+ + + + P+ W G L L+ + WI+++++DE G S+
Sbjct: 333 RSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGDSLEFSNF 388
Query: 331 F*T 323
F T
Sbjct: 389 FQT 391
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 47.6 bits (108), Expect = 1e-05
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Frame = -2
Query: 610 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 446
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 445 ----YSVWIGGSILASL-STFQQMWISKQEY 368
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.71
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 434 PYGVLPLWRSNDLNLHCRWGESCD 505
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.71
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 434 PYGVLPLWRSNDLNLHCRWGESCD 505
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.71
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 434 PYGVLPLWRSNDLNLHCRWGESCD 505
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 270 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 362
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 373 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 272
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 270 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 362
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -2
Query: 454 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 293
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,933,329
Number of Sequences: 27780
Number of extensions: 306578
Number of successful extensions: 862
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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