Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_F09
         (788 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.             210   1e-56
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    25   0.80 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   3.2  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   7.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   7.5  

>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score =  210 bits (513), Expect = 1e-56
 Identities = 98/101 (97%), Positives = 99/101 (98%)
 Frame = -2

Query: 682 PEXXFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 503
           PE  FQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI
Sbjct: 33  PEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 92

Query: 502 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 380
           TALAPSTMKIKIIAPPE+KYSVWIGGSILASLSTFQQMWIS
Sbjct: 93  TALAPSTMKIKIIAPPEKKYSVWIGGSILASLSTFQQMWIS 133



 Score = 48.0 bits (109), Expect = 1e-07
 Identities = 20/29 (68%), Positives = 21/29 (72%)
 Frame = -1

Query: 737 YEXPDGQVITIGNEKFRCPRGXFPTXVLG 651
           YE PDGQVITIGNE+FRCP   F    LG
Sbjct: 15  YELPDGQVITIGNERFRCPEALFQPSFLG 43


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 25.0 bits (52), Expect = 0.80
 Identities = 21/62 (33%), Positives = 30/62 (48%)
 Frame = -2

Query: 616 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV 437
           N  +K D DI++  Y + V      MYP  +  M+K I+    +  KI I  P E K  +
Sbjct: 342 NKELKYD-DIKEMEYLDKVFKETLRMYPPASILMRKAISDYTFNDTKITI--PKEMK--I 396

Query: 436 WI 431
           WI
Sbjct: 397 WI 398


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 12/51 (23%), Positives = 24/51 (47%)
 Frame = -2

Query: 709 LSXTKNSVAPEXXFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 557
           L+   N +  +   + +FLG+    +   +YN +   D  + KDL+   +L
Sbjct: 314 LNLAGNRLGSDRVDETTFLGLIRLIVLNLSYNMLTHIDARMFKDLFFLQIL 364


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 563 RIVRWYHHVPWNRRPYAK 510
           RI+ +YH    +++PY K
Sbjct: 424 RIIDYYHSYKMHQKPYNK 441


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 563 RIVRWYHHVPWNRRPYAK 510
           RI+ +YH    +++PY K
Sbjct: 424 RIIDYYHSYKMHQKPYNK 441


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,456
Number of Sequences: 438
Number of extensions: 4064
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)