Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_F05
(828 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 173 2e-43
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 173 2e-43
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 173 2e-43
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 173 2e-43
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 173 2e-43
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 173 2e-43
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 152 3e-37
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 152 3e-37
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 173 bits (420), Expect = 2e-43
Identities = 85/168 (50%), Positives = 105/168 (62%)
Frame = -1
Query: 780 RXKKXXXIMEIQXNGXTXEXKXKWXXKXFGRTFXXXXLCLPQDEMIXCIGVXXGKXYKGX 601
R +K ++EIQ NG T E K W + + + QDEMI IGV G +KG
Sbjct: 173 RRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTV-FAQDEMIDTIGVTRGHGFKGV 231
Query: 600 XXRWHTKKXPRKTHKVLRKVACIGAWHPFRVSFTVXRXXQKGYXXRXEMNKKIYRIGQGI 421
RWHTKK PRKTHK LRKVACIGAWHP RV+FTV R QKG+ R +N KIYRIG+
Sbjct: 232 TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSA 291
Query: 420 XKKDGKVIKNNAXTEYXXXEKSITPMGGFPHYGEVNXXFVMIQGLXHG 277
++G KNN TE+ +K+ITPMGGFP YG VN ++M++G G
Sbjct: 292 LTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
Score = 62.1 bits (144), Expect = 5e-10
Identities = 32/69 (46%), Positives = 39/69 (56%)
Frame = -2
Query: 293 KGXCMGXKKXIIXXRXFXXVXTKRXALEKINXKFXDTSSKFXHXXFQTPXDKAAFMGTFK 114
+G +G KK +I R TKR A EKIN K+ DTSSK H FQT +K AFMG K
Sbjct: 331 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
Query: 113 KXXIREEAA 87
+ + E A
Sbjct: 391 RDFLAEAEA 399
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 173 bits (420), Expect = 2e-43
Identities = 85/168 (50%), Positives = 105/168 (62%)
Frame = -1
Query: 780 RXKKXXXIMEIQXNGXTXEXKXKWXXKXFGRTFXXXXLCLPQDEMIXCIGVXXGKXYKGX 601
R +K ++EIQ NG T E K W + + + QDEMI IGV G +KG
Sbjct: 173 RRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTV-FAQDEMIDTIGVTRGHGFKGV 231
Query: 600 XXRWHTKKXPRKTHKVLRKVACIGAWHPFRVSFTVXRXXQKGYXXRXEMNKKIYRIGQGI 421
RWHTKK PRKTHK LRKVACIGAWHP RV+FTV R QKG+ R +N KIYRIG+
Sbjct: 232 TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSA 291
Query: 420 XKKDGKVIKNNAXTEYXXXEKSITPMGGFPHYGEVNXXFVMIQGLXHG 277
++G KNN TE+ +K+ITPMGGFP YG VN ++M++G G
Sbjct: 292 LTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
Score = 62.1 bits (144), Expect = 5e-10
Identities = 32/69 (46%), Positives = 39/69 (56%)
Frame = -2
Query: 293 KGXCMGXKKXIIXXRXFXXVXTKRXALEKINXKFXDTSSKFXHXXFQTPXDKAAFMGTFK 114
+G +G KK +I R TKR A EKIN K+ DTSSK H FQT +K AFMG K
Sbjct: 331 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
Query: 113 KXXIREEAA 87
+ + E A
Sbjct: 391 RDFLAEAEA 399
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 173 bits (420), Expect = 2e-43
Identities = 85/168 (50%), Positives = 105/168 (62%)
Frame = -1
Query: 780 RXKKXXXIMEIQXNGXTXEXKXKWXXKXFGRTFXXXXLCLPQDEMIXCIGVXXGKXYKGX 601
R +K ++EIQ NG T E K W + + + QDEMI IGV G +KG
Sbjct: 75 RRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTV-FAQDEMIDTIGVTRGHGFKGV 133
Query: 600 XXRWHTKKXPRKTHKVLRKVACIGAWHPFRVSFTVXRXXQKGYXXRXEMNKKIYRIGQGI 421
RWHTKK PRKTHK LRKVACIGAWHP RV+FTV R QKG+ R +N KIYRIG+
Sbjct: 134 TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSA 193
Query: 420 XKKDGKVIKNNAXTEYXXXEKSITPMGGFPHYGEVNXXFVMIQGLXHG 277
++G KNN TE+ +K+ITPMGGFP YG VN ++M++G G
Sbjct: 194 LTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 238
Score = 62.1 bits (144), Expect = 5e-10
Identities = 32/69 (46%), Positives = 39/69 (56%)
Frame = -2
Query: 293 KGXCMGXKKXIIXXRXFXXVXTKRXALEKINXKFXDTSSKFXHXXFQTPXDKAAFMGTFK 114
+G +G KK +I R TKR A EKIN K+ DTSSK H FQT +K AFMG K
Sbjct: 233 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 292
Query: 113 KXXIREEAA 87
+ + E A
Sbjct: 293 RDFLAEAEA 301
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 173 bits (420), Expect = 2e-43
Identities = 85/168 (50%), Positives = 105/168 (62%)
Frame = -1
Query: 780 RXKKXXXIMEIQXNGXTXEXKXKWXXKXFGRTFXXXXLCLPQDEMIXCIGVXXGKXYKGX 601
R +K ++EIQ NG T E K W + + + QDEMI IGV G +KG
Sbjct: 173 RRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTV-FAQDEMIDTIGVTRGHGFKGV 231
Query: 600 XXRWHTKKXPRKTHKVLRKVACIGAWHPFRVSFTVXRXXQKGYXXRXEMNKKIYRIGQGI 421
RWHTKK PRKTHK LRKVACIGAWHP RV+FTV R QKG+ R +N KIYRIG+
Sbjct: 232 TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSA 291
Query: 420 XKKDGKVIKNNAXTEYXXXEKSITPMGGFPHYGEVNXXFVMIQGLXHG 277
++G KNN TE+ +K+ITPMGGFP YG VN ++M++G G
Sbjct: 292 LTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
Score = 62.1 bits (144), Expect = 5e-10
Identities = 32/69 (46%), Positives = 39/69 (56%)
Frame = -2
Query: 293 KGXCMGXKKXIIXXRXFXXVXTKRXALEKINXKFXDTSSKFXHXXFQTPXDKAAFMGTFK 114
+G +G KK +I R TKR A EKIN K+ DTSSK H FQT +K AFMG K
Sbjct: 331 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
Query: 113 KXXIREEAA 87
+ + E A
Sbjct: 391 RDFLAEAEA 399
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 173 bits (420), Expect = 2e-43
Identities = 85/168 (50%), Positives = 105/168 (62%)
Frame = -1
Query: 780 RXKKXXXIMEIQXNGXTXEXKXKWXXKXFGRTFXXXXLCLPQDEMIXCIGVXXGKXYKGX 601
R +K ++EIQ NG T E K W + + + QDEMI IGV G +KG
Sbjct: 75 RRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTV-FAQDEMIDTIGVTRGHGFKGV 133
Query: 600 XXRWHTKKXPRKTHKVLRKVACIGAWHPFRVSFTVXRXXQKGYXXRXEMNKKIYRIGQGI 421
RWHTKK PRKTHK LRKVACIGAWHP RV+FTV R QKG+ R +N KIYRIG+
Sbjct: 134 TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSA 193
Query: 420 XKKDGKVIKNNAXTEYXXXEKSITPMGGFPHYGEVNXXFVMIQGLXHG 277
++G KNN TE+ +K+ITPMGGFP YG VN ++M++G G
Sbjct: 194 LTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 238
Score = 62.1 bits (144), Expect = 5e-10
Identities = 32/69 (46%), Positives = 39/69 (56%)
Frame = -2
Query: 293 KGXCMGXKKXIIXXRXFXXVXTKRXALEKINXKFXDTSSKFXHXXFQTPXDKAAFMGTFK 114
+G +G KK +I R TKR A EKIN K+ DTSSK H FQT +K AFMG K
Sbjct: 233 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 292
Query: 113 KXXIREEAA 87
+ + E A
Sbjct: 293 RDFLAEAEA 301
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 173 bits (420), Expect = 2e-43
Identities = 85/168 (50%), Positives = 105/168 (62%)
Frame = -1
Query: 780 RXKKXXXIMEIQXNGXTXEXKXKWXXKXFGRTFXXXXLCLPQDEMIXCIGVXXGKXYKGX 601
R +K ++EIQ NG T E K W + + + QDEMI IGV G +KG
Sbjct: 173 RRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTV-FAQDEMIDTIGVTRGHGFKGV 231
Query: 600 XXRWHTKKXPRKTHKVLRKVACIGAWHPFRVSFTVXRXXQKGYXXRXEMNKKIYRIGQGI 421
RWHTKK PRKTHK LRKVACIGAWHP RV+FTV R QKG+ R +N KIYRIG+
Sbjct: 232 TSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSA 291
Query: 420 XKKDGKVIKNNAXTEYXXXEKSITPMGGFPHYGEVNXXFVMIQGLXHG 277
++G KNN TE+ +K+ITPMGGFP YG VN ++M++G G
Sbjct: 292 LTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
Score = 62.1 bits (144), Expect = 5e-10
Identities = 32/69 (46%), Positives = 39/69 (56%)
Frame = -2
Query: 293 KGXCMGXKKXIIXXRXFXXVXTKRXALEKINXKFXDTSSKFXHXXFQTPXDKAAFMGTFK 114
+G +G KK +I R TKR A EKIN K+ DTSSK H FQT +K AFMG K
Sbjct: 331 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
Query: 113 KXXIREEAA 87
+ + E A
Sbjct: 391 RDFLAEAEA 399
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 152 bits (369), Expect = 3e-37
Identities = 71/125 (56%), Positives = 86/125 (68%)
Frame = -1
Query: 651 EMIXCIGVXXGKXYKGXXXRWHTKKXPRKTHKVLRKVACIGAWHPFRVSFTVXRXXQKGY 472
+MI IGV G +KG RWHTKK PRKTHK LRKVACIGAWHP RV+FTV R QKG+
Sbjct: 167 QMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGF 226
Query: 471 XXRXEMNKKIYRIGQGIXKKDGKVIKNNAXTEYXXXEKSITPMGGFPHYGEVNXXFVMIQ 292
R +N KIYRIG+ ++G KNN TE+ +K+ITPMGGFP YG VN ++M++
Sbjct: 227 HHRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLR 283
Query: 291 GLXHG 277
G G
Sbjct: 284 GAVLG 288
Score = 62.1 bits (144), Expect = 5e-10
Identities = 32/69 (46%), Positives = 39/69 (56%)
Frame = -2
Query: 293 KGXCMGXKKXIIXXRXFXXVXTKRXALEKINXKFXDTSSKFXHXXFQTPXDKAAFMGTFK 114
+G +G KK +I R TKR A EKIN K+ DTSSK H FQT +K AFMG K
Sbjct: 283 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 342
Query: 113 KXXIREEAA 87
+ + E A
Sbjct: 343 RDFLAEAEA 351
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 152 bits (369), Expect = 3e-37
Identities = 71/125 (56%), Positives = 86/125 (68%)
Frame = -1
Query: 651 EMIXCIGVXXGKXYKGXXXRWHTKKXPRKTHKVLRKVACIGAWHPFRVSFTVXRXXQKGY 472
+MI IGV G +KG RWHTKK PRKTHK LRKVACIGAWHP RV+FTV R QKG+
Sbjct: 167 QMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGF 226
Query: 471 XXRXEMNKKIYRIGQGIXKKDGKVIKNNAXTEYXXXEKSITPMGGFPHYGEVNXXFVMIQ 292
R +N KIYRIG+ ++G KNN TE+ +K+ITPMGGFP YG VN ++M++
Sbjct: 227 HHRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLR 283
Query: 291 GLXHG 277
G G
Sbjct: 284 GAVLG 288
Score = 62.1 bits (144), Expect = 5e-10
Identities = 32/69 (46%), Positives = 39/69 (56%)
Frame = -2
Query: 293 KGXCMGXKKXIIXXRXFXXVXTKRXALEKINXKFXDTSSKFXHXXFQTPXDKAAFMGTFK 114
+G +G KK +I R TKR A EKIN K+ DTSSK H FQT +K AFMG K
Sbjct: 283 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 342
Query: 113 KXXIREEAA 87
+ + E A
Sbjct: 343 RDFLAEAEA 351
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,273,286
Number of Sequences: 27780
Number of extensions: 177995
Number of successful extensions: 215
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 207
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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