Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_F02
(782 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327... 165 3e-41
12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342... 158 5e-39
11_04_0146 - 14091671-14092357,14092996-14093229 30 1.8
03_05_1096 - 30364144-30365310,30365825-30365971,30366087-303663... 29 3.2
06_03_0915 - 25929433-25930893 29 5.5
12_01_0582 - 4752576-4752786,4752955-4753037,4753324-4753530,475... 28 7.3
04_03_0033 + 9936723-9937019,9937621-9937754,9938966-9939329 28 7.3
04_01_0592 + 7808821-7809210 28 9.6
03_05_0901 + 28635672-28636094,28637623-28637802,28637903-286381... 28 9.6
>11_01_0427 +
3274817-3274901,3275587-3275697,3275979-3276283,
3276406-3276815,3276942-3277200
Length = 389
Score = 165 bits (401), Expect = 3e-41
Identities = 103/226 (45%), Positives = 129/226 (57%), Gaps = 5/226 (2%)
Frame = -2
Query: 775 RQKKXHIXGIQXXGVPSRTK*NGPENIWRNXIPVDSVFAQDEMIDCIGVTQGAKDTKVSL 596
+QKK H+ IQ G K + + IPVD+VF +DEMID IGVT+G V
Sbjct: 175 KQKKAHLMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVT 234
Query: 595 LVGTQRSYPVRHTRXLGKLPALELGILLGCRSL*LVLVRKVIITVLK*TRKSIVLDQGIH 416
G R P + R L K+ + G R V TV + + ++
Sbjct: 235 RWGVTR-LPRKTHRGLRKVACI--GAWHPAR---------VSYTVARAGQNGYHHRTEMN 282
Query: 415 KKDGKVIKNN-----ASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITL 251
KK K+ K+ A TE+D +EK ITPMGGFPHYG V D++MIKGCC+GPKKR++TL
Sbjct: 283 KKVYKIGKSGQESHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTL 342
Query: 250 RKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 113
R+SL T R ALE+I LKFIDTSSKFGHGRFQT +K F G LK
Sbjct: 343 RQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQRFFGKLK 388
Score = 124 bits (300), Expect = 6e-29
Identities = 60/102 (58%), Positives = 72/102 (70%)
Frame = -1
Query: 734 GTIEDKVKWAREHLEKPYPCRFCVCPR*ND*LHWCHPRGKGYKGVTSRWHTKKLPRKTHK 555
GTI DKV + + EK P V + +GKGY+GV +RW +LPRKTH+
Sbjct: 189 GTIADKVDYGYKFFEKEIPVD-AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR 247
Query: 554 XLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 429
LRKVACIGAWHP+RVS+TVARAGQ GYHHRTEMNKK+Y+IG
Sbjct: 248 GLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG 289
>12_01_0435 +
3428552-3428636,3429242-3429352,3429434-3429738,
3429821-3430230,3430323-3430556,3430934-3431378,
3432300-3432390,3433292-3433518,3433786-3433861,
3434009-3434134,3434221-3434384
Length = 757
Score = 158 bits (383), Expect = 5e-39
Identities = 99/218 (45%), Positives = 125/218 (57%), Gaps = 5/218 (2%)
Frame = -2
Query: 775 RQKKXHIXGIQXXGVPSRTK*NGPENIWRNXIPVDSVFAQDEMIDCIGVTQGAKDTKVSL 596
+QKK H+ IQ G K + + IPVD+VF +DEMID IGVT+G V
Sbjct: 175 KQKKAHLMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVT 234
Query: 595 LVGTQRSYPVRHTRXLGKLPALELGILLGCRSL*LVLVRKVIITVLK*TRKSIVLDQGIH 416
G R P + R L K+ + G R V TV + + ++
Sbjct: 235 RWGVTR-LPRKTHRGLRKVACI--GAWHPAR---------VSYTVARAGQNGYHHRTEMN 282
Query: 415 KKDGKVIKNN-----ASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITL 251
KK K+ K+ A TE+D +EK ITPMGGFPHYG V D++MIKGCC+GPKKR++TL
Sbjct: 283 KKVYKIGKSGQESHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTL 342
Query: 250 RKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADK 137
R+SL T R ALE+I LKFIDTSSKFGHGRFQT +K
Sbjct: 343 RQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEK 380
Score = 124 bits (300), Expect = 6e-29
Identities = 60/102 (58%), Positives = 72/102 (70%)
Frame = -1
Query: 734 GTIEDKVKWAREHLEKPYPCRFCVCPR*ND*LHWCHPRGKGYKGVTSRWHTKKLPRKTHK 555
GTI DKV + + EK P V + +GKGY+GV +RW +LPRKTH+
Sbjct: 189 GTIADKVDYGYKFFEKEIPVD-AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR 247
Query: 554 XLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 429
LRKVACIGAWHP+RVS+TVARAGQ GYHHRTEMNKK+Y+IG
Sbjct: 248 GLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG 289
>11_04_0146 - 14091671-14092357,14092996-14093229
Length = 306
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -1
Query: 617 KGYKGVTSRWHTKKLPRKTHKXLRKVACIGAW 522
K YK T RWH K++ K K KV +W
Sbjct: 266 KIYKDRTKRWHDKRIKHKEFKAGDKVLLFNSW 297
>03_05_1096 - 30364144-30365310,30365825-30365971,30366087-30366393,
30366541-30366849,30367544-30370567,30370640-30372290,
30372373-30373463,30373544-30373646,30373737-30374439,
30374654-30375783,30375913-30376027,30376504-30376695,
30377443-30377616,30378438-30378494,30378581-30378716,
30378842-30378927,30379023-30379092,30379993-30380021,
30380444-30380456,30380762-30381006
Length = 3582
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -2
Query: 370 DLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 275
D + + +P+GG P YG ++ D + C +G
Sbjct: 1371 DPTSAAASPIGGIPRYGRLSGDVYVCNQCTIG 1402
>06_03_0915 - 25929433-25930893
Length = 486
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 329 GETSHRCNGFLRQIILSRCIVFNNFAILFVDSLVQYDRFSCSFQY 463
GE H+ G I+ C++ NN +L V ++ D S S ++
Sbjct: 138 GEVVHKALGRPASIVAQMCVIINNAGVLIVYLIIIGDVMSGSLKH 182
>12_01_0582 -
4752576-4752786,4752955-4753037,4753324-4753530,
4755128-4755207,4756853-4756998,4757088-4757719
Length = 452
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +3
Query: 342 IGVMDFSDRSYSVDALFLITLPSFLWIPWSNTIDFLVHFSTVMI 473
+ +DF + ++ +L LPS W W + + + VH ++ I
Sbjct: 392 LSAIDFLKHAADLNTRWLKRLPSNFWATWVHPLTYKVHVKSLWI 435
>04_03_0033 + 9936723-9937019,9937621-9937754,9938966-9939329
Length = 264
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 617 KGYKGVTSRWHTKKLPRKTHKXLRKV 540
K YK T RWH K++ K K KV
Sbjct: 29 KIYKDKTKRWHDKRIKHKEFKAREKV 54
>04_01_0592 + 7808821-7809210
Length = 129
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 617 KGYKGVTSRWHTKKLPRKTHKXLRKV 540
K YK T RWH K++ K K L KV
Sbjct: 29 KIYKERTKRWHDKRIKIKKFKPLDKV 54
>03_05_0901 +
28635672-28636094,28637623-28637802,28637903-28638172,
28638506-28638757,28639205-28639453,28639533-28639606,
28639798-28639915,28640421-28640555,28640813-28640965
Length = 617
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 494 ARAGQKGYHHRTEMNKKIYRIGPRNPQ 414
+RA GY + +E N +IYR+ R+P+
Sbjct: 590 SRADNLGYEYMSEQNNEIYRLLLRDPK 616
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,257,028
Number of Sequences: 37544
Number of extensions: 461545
Number of successful extensions: 1137
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1135
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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