BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_F02
(782 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 237 2e-62
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 237 2e-62
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 237 2e-62
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 237 2e-62
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 237 2e-62
BT021953-1|AAX51658.1| 393|Drosophila melanogaster GH07821p pro... 29 9.5
BT021370-1|AAX33518.1| 884|Drosophila melanogaster LP07893p pro... 29 9.5
BT021302-1|AAX33450.1| 889|Drosophila melanogaster RE22038p pro... 29 9.5
AE014298-2950|ABC67193.1| 1456|Drosophila melanogaster CG32529-P... 29 9.5
AE014298-1512|AAF47964.1| 889|Drosophila melanogaster CG2202-PA... 29 9.5
AE014297-4192|AAF56757.1| 393|Drosophila melanogaster CG12261-P... 29 9.5
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 237 bits (579), Expect = 2e-62
Identities = 128/230 (55%), Positives = 151/230 (65%)
Frame = -2
Query: 781 KQRQKKXHIXGIQXXGVPSRTK*NGPENIWRNXIPVDSVFAQDEMIDCIGVTQGAKDTKV 602
KQRQKK H+ IQ G K I V +VF QDEMIDC+GVT+G V
Sbjct: 183 KQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGV 242
Query: 601 SLLVGTQRSYPVRHTRXLGKLPALELGILLGCRSL*LVLVRKVIITVLK*TRKSIVLDQG 422
+ T++ P + + L K+ + + +K + +K + G
Sbjct: 243 TSRWHTKK-LPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 301
Query: 421 IHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKS 242
IH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKS
Sbjct: 302 IHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKS 361
Query: 241 LRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKERXREE 92
L HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKK+R +EE
Sbjct: 362 LLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 411
Score = 159 bits (386), Expect = 4e-39
Identities = 78/104 (75%), Positives = 83/104 (79%), Gaps = 2/104 (1%)
Frame = -1
Query: 734 GTIEDKVKWAREHLEKPYPCRFCVCPR*ND*LHWCH--PRGKGYKGVTSRWHTKKLPRKT 561
G+IEDKVKWAREHLEKP D + C +GKG+KGVTSRWHTKKLPRKT
Sbjct: 199 GSIEDKVKWAREHLEKPIQVSNVFG---QDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKT 255
Query: 560 HKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 429
HK LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG
Sbjct: 256 HKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIG 299
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 237 bits (579), Expect = 2e-62
Identities = 128/230 (55%), Positives = 151/230 (65%)
Frame = -2
Query: 781 KQRQKKXHIXGIQXXGVPSRTK*NGPENIWRNXIPVDSVFAQDEMIDCIGVTQGAKDTKV 602
KQRQKK H+ IQ G K I V +VF QDEMIDC+GVT+G V
Sbjct: 172 KQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGV 231
Query: 601 SLLVGTQRSYPVRHTRXLGKLPALELGILLGCRSL*LVLVRKVIITVLK*TRKSIVLDQG 422
+ T++ P + + L K+ + + +K + +K + G
Sbjct: 232 TSRWHTKK-LPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 290
Query: 421 IHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKS 242
IH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKS
Sbjct: 291 IHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKS 350
Query: 241 LRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKERXREE 92
L HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKK+R +EE
Sbjct: 351 LLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 400
Score = 159 bits (386), Expect = 4e-39
Identities = 78/104 (75%), Positives = 83/104 (79%), Gaps = 2/104 (1%)
Frame = -1
Query: 734 GTIEDKVKWAREHLEKPYPCRFCVCPR*ND*LHWCH--PRGKGYKGVTSRWHTKKLPRKT 561
G+IEDKVKWAREHLEKP D + C +GKG+KGVTSRWHTKKLPRKT
Sbjct: 188 GSIEDKVKWAREHLEKPIQVSNVFG---QDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKT 244
Query: 560 HKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 429
HK LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG
Sbjct: 245 HKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIG 288
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 237 bits (579), Expect = 2e-62
Identities = 128/230 (55%), Positives = 151/230 (65%)
Frame = -2
Query: 781 KQRQKKXHIXGIQXXGVPSRTK*NGPENIWRNXIPVDSVFAQDEMIDCIGVTQGAKDTKV 602
KQRQKK H+ IQ G K I V +VF QDEMIDC+GVT+G V
Sbjct: 159 KQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGV 218
Query: 601 SLLVGTQRSYPVRHTRXLGKLPALELGILLGCRSL*LVLVRKVIITVLK*TRKSIVLDQG 422
+ T++ P + + L K+ + + +K + +K + G
Sbjct: 219 TSRWHTKK-LPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 277
Query: 421 IHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKS 242
IH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKS
Sbjct: 278 IHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKS 337
Query: 241 LRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKERXREE 92
L HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKK+R +EE
Sbjct: 338 LLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 387
Score = 159 bits (386), Expect = 4e-39
Identities = 78/104 (75%), Positives = 83/104 (79%), Gaps = 2/104 (1%)
Frame = -1
Query: 734 GTIEDKVKWAREHLEKPYPCRFCVCPR*ND*LHWCH--PRGKGYKGVTSRWHTKKLPRKT 561
G+IEDKVKWAREHLEKP D + C +GKG+KGVTSRWHTKKLPRKT
Sbjct: 175 GSIEDKVKWAREHLEKPIQVSNVFG---QDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKT 231
Query: 560 HKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 429
HK LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG
Sbjct: 232 HKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIG 275
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 237 bits (579), Expect = 2e-62
Identities = 128/230 (55%), Positives = 151/230 (65%)
Frame = -2
Query: 781 KQRQKKXHIXGIQXXGVPSRTK*NGPENIWRNXIPVDSVFAQDEMIDCIGVTQGAKDTKV 602
KQRQKK H+ IQ G K I V +VF QDEMIDC+GVT+G V
Sbjct: 159 KQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGV 218
Query: 601 SLLVGTQRSYPVRHTRXLGKLPALELGILLGCRSL*LVLVRKVIITVLK*TRKSIVLDQG 422
+ T++ P + + L K+ + + +K + +K + G
Sbjct: 219 TSRWHTKK-LPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 277
Query: 421 IHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKS 242
IH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKS
Sbjct: 278 IHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKS 337
Query: 241 LRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKERXREE 92
L HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKK+R +EE
Sbjct: 338 LLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 387
Score = 159 bits (386), Expect = 4e-39
Identities = 78/104 (75%), Positives = 83/104 (79%), Gaps = 2/104 (1%)
Frame = -1
Query: 734 GTIEDKVKWAREHLEKPYPCRFCVCPR*ND*LHWCH--PRGKGYKGVTSRWHTKKLPRKT 561
G+IEDKVKWAREHLEKP D + C +GKG+KGVTSRWHTKKLPRKT
Sbjct: 175 GSIEDKVKWAREHLEKPIQVSNVFG---QDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKT 231
Query: 560 HKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 429
HK LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG
Sbjct: 232 HKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIG 275
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 237 bits (579), Expect = 2e-62
Identities = 128/230 (55%), Positives = 151/230 (65%)
Frame = -2
Query: 781 KQRQKKXHIXGIQXXGVPSRTK*NGPENIWRNXIPVDSVFAQDEMIDCIGVTQGAKDTKV 602
KQRQKK H+ IQ G K I V +VF QDEMIDC+GVT+G V
Sbjct: 172 KQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGV 231
Query: 601 SLLVGTQRSYPVRHTRXLGKLPALELGILLGCRSL*LVLVRKVIITVLK*TRKSIVLDQG 422
+ T++ P + + L K+ + + +K + +K + G
Sbjct: 232 TSRWHTKK-LPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 290
Query: 421 IHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKS 242
IH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKS
Sbjct: 291 IHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKS 350
Query: 241 LRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKERXREE 92
L HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKK+R +EE
Sbjct: 351 LLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 400
Score = 159 bits (386), Expect = 4e-39
Identities = 78/104 (75%), Positives = 83/104 (79%), Gaps = 2/104 (1%)
Frame = -1
Query: 734 GTIEDKVKWAREHLEKPYPCRFCVCPR*ND*LHWCH--PRGKGYKGVTSRWHTKKLPRKT 561
G+IEDKVKWAREHLEKP D + C +GKG+KGVTSRWHTKKLPRKT
Sbjct: 188 GSIEDKVKWAREHLEKPIQVSNVFG---QDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKT 244
Query: 560 HKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 429
HK LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG
Sbjct: 245 HKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIG 288
>BT021953-1|AAX51658.1| 393|Drosophila melanogaster GH07821p
protein.
Length = 393
Score = 28.7 bits (61), Expect = 9.5
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 284 ATLDHHKVV--VYFTIMGETSHRCNGFLRQIILSRCIVFNNFAILFVDSLVQYD 439
ATLD K + +YF + G S+ F + +L++C+ + + + LVQY+
Sbjct: 157 ATLDTTKRMNQLYFPLEGRQSYTPRMFALEELLAKCLAEHKYEFILDRLLVQYE 210
>BT021370-1|AAX33518.1| 884|Drosophila melanogaster LP07893p
protein.
Length = 884
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 589 QREVTPL-YPLPLG*HQCSQSFHLGQTQNRQGXGFSRCSLAHFTLSS 726
Q++ PL +PLP HQ HL Q +Q RCS T SS
Sbjct: 59 QQQQQPLQHPLPHQPHQLQHLLHLQHQQQQQQQHQQRCSSVGSTSSS 105
>BT021302-1|AAX33450.1| 889|Drosophila melanogaster RE22038p
protein.
Length = 889
Score = 28.7 bits (61), Expect = 9.5
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 719 KVKWAREHLEKPYPCRFCV 663
+V R + EKPY CRFCV
Sbjct: 642 RVHMRRHNGEKPYKCRFCV 660
>AE014298-2950|ABC67193.1| 1456|Drosophila melanogaster CG32529-PD,
isoform D protein.
Length = 1456
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 589 QREVTPL-YPLPLG*HQCSQSFHLGQTQNRQGXGFSRCSLAHFTLSS 726
Q++ PL +PLP HQ HL Q +Q RCS T SS
Sbjct: 59 QQQQQPLQHPLPHQPHQLQHLLHLQHQQQQQQQHQQRCSSVGSTSSS 105
>AE014298-1512|AAF47964.1| 889|Drosophila melanogaster CG2202-PA
protein.
Length = 889
Score = 28.7 bits (61), Expect = 9.5
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 719 KVKWAREHLEKPYPCRFCV 663
+V R + EKPY CRFCV
Sbjct: 642 RVHMRRHNGEKPYKCRFCV 660
>AE014297-4192|AAF56757.1| 393|Drosophila melanogaster CG12261-PA
protein.
Length = 393
Score = 28.7 bits (61), Expect = 9.5
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 284 ATLDHHKVV--VYFTIMGETSHRCNGFLRQIILSRCIVFNNFAILFVDSLVQYD 439
ATLD K + +YF + G S+ F + +L++C+ + + + LVQY+
Sbjct: 157 ATLDTTKRMNQLYFPLEGRQSYTPRMFALEELLAKCLAEHKYEFILDRLLVQYE 210
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,737,336
Number of Sequences: 53049
Number of extensions: 761705
Number of successful extensions: 2385
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2380
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3613676352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -