Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_E04
         (802 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-884|AAF52222.1|  299|Drosophila melanogaster CG14035-PA...    35   0.15 
X13666-2|CAA31960.1| 2510|Drosophila melanogaster sevenless prot...    30   4.2  
X13666-1|CAB55310.1| 2554|Drosophila melanogaster sevenless prot...    30   4.2  
AE014298-1543|AAF47992.2| 2554|Drosophila melanogaster CG18085-P...    30   4.2  
AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA...    29   5.6  
J03158-1|AAA28882.1| 2554|Drosophila melanogaster protein ( D.me...    29   7.4  
AY119125-1|AAM50985.1|  553|Drosophila melanogaster RE28286p pro...    29   7.4  
AE014298-1861|AAF48238.3|  625|Drosophila melanogaster CG12723-P...    29   7.4  

>AE014134-884|AAF52222.1|  299|Drosophila melanogaster CG14035-PA
           protein.
          Length = 299

 Score = 34.7 bits (76), Expect = 0.15
 Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
 Frame = -1

Query: 703 PAXSGTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAY-LTPSS 527
           P   G   R  NPR H P +P  +S    P +P+    AP   P +S   P  + ++P+ 
Sbjct: 6   PPPYGNGPRGWNPRAHNPASPSPSSFLYRPPSPW--TTAPSPPPIISGPRPYGHAMSPAP 63

Query: 526 LGMXKG 509
           +   +G
Sbjct: 64  INQVRG 69


>X13666-2|CAA31960.1| 2510|Drosophila melanogaster sevenless protein
           protein.
          Length = 2510

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -3

Query: 737 GGXALMHQAXLPCDXGYINPIIKSPIPYTNHP-RLNIHFHQSPDAVL 600
           G  A  + A   CD  Y+  I+++ IPYT +  R  + F ++ D VL
Sbjct: 331 GSSAWFNLADYDCDEYYVCEILEALIPYTQYRFRFELPFGENRDEVL 377


>X13666-1|CAB55310.1| 2554|Drosophila melanogaster sevenless protein
           protein.
          Length = 2554

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -3

Query: 737 GGXALMHQAXLPCDXGYINPIIKSPIPYTNHP-RLNIHFHQSPDAVL 600
           G  A  + A   CD  Y+  I+++ IPYT +  R  + F ++ D VL
Sbjct: 375 GSSAWFNLADYDCDEYYVCEILEALIPYTQYRFRFELPFGENRDEVL 421


>AE014298-1543|AAF47992.2| 2554|Drosophila melanogaster CG18085-PA
           protein.
          Length = 2554

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -3

Query: 737 GGXALMHQAXLPCDXGYINPIIKSPIPYTNHP-RLNIHFHQSPDAVL 600
           G  A  + A   CD  Y+  I+++ IPYT +  R  + F ++ D VL
Sbjct: 375 GSSAWFNLADYDCDEYYVCEILEALIPYTQYRFRFELPFGENRDEVL 421


>AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA
           protein.
          Length = 926

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 22/62 (35%), Positives = 30/62 (48%)
 Frame = -1

Query: 685 STRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGV 506
           ST+++ P    PTTP  T  SI+P T   KE AP  +    +   +   TP   G  +G 
Sbjct: 405 STKAACP---APTTPKTTVKSISPTTTTKKEVAPKKRSATPTARSTKAGTPVG-GTERGP 460

Query: 505 SP 500
           SP
Sbjct: 461 SP 462


>J03158-1|AAA28882.1| 2554|Drosophila melanogaster protein (
           D.melanogaster sevenlessprotein gene, complete cds. ).
          Length = 2554

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -3

Query: 737 GGXALMHQAXLPCDXGYINPIIKSPIPYTNHP-RLNIHFHQSPDAVL 600
           G  A  + A   CD  Y+  I+++ IPYT +  R  + F ++ D VL
Sbjct: 375 GSSAWFNLADYDCDEYYMCEILEALIPYTQYRFRFELPFGENRDEVL 421


>AY119125-1|AAM50985.1|  553|Drosophila melanogaster RE28286p
           protein.
          Length = 553

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 21/52 (40%), Positives = 29/52 (55%)
 Frame = -1

Query: 673 SNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGM 518
           S P    P +P+  SI++ P  PY    A G  PP+ S+ PSA L+ SS G+
Sbjct: 458 SPPTESAPASPNRPSITLLP--PYGSAPAEGYLPPVGSQ-PSA-LSASSAGI 505


>AE014298-1861|AAF48238.3|  625|Drosophila melanogaster CG12723-PA
           protein.
          Length = 625

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 21/52 (40%), Positives = 29/52 (55%)
 Frame = -1

Query: 673 SNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGM 518
           S P    P +P+  SI++ P  PY    A G  PP+ S+ PSA L+ SS G+
Sbjct: 530 SPPTESAPASPNRPSITLLP--PYGSAPAEGYLPPVGSQ-PSA-LSASSAGI 577


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,489,841
Number of Sequences: 53049
Number of extensions: 653001
Number of successful extensions: 2119
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2112
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3736869864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)