Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_E01
(737 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0381 + 28878811-28879120,28880189-28880331,28880753-288815... 32 0.55
03_05_1101 - 30408944-30410410 31 0.95
05_05_0227 - 23449579-23450459,23450574-23450691 31 1.3
01_06_0140 - 26881282-26881290,26882027-26882128,26882816-268829... 30 2.2
02_03_0287 + 17320242-17320481,17323422-17324767,17325124-17325142 29 3.9
01_07_0213 - 42028941-42029055,42029444-42029480,42029876-420302... 29 3.9
01_01_0140 + 1265785-1265902,1266424-1266845 29 3.9
11_05_0086 + 18964493-18965737,18965896-18966360 29 5.1
08_02_0707 - 20212190-20214592 29 5.1
10_08_0134 + 15107411-15107939,15108049-15108124,15108332-151084... 28 6.7
07_03_0471 + 18501496-18502104,18503009-18503260,18503367-185035... 28 6.7
02_01_0759 - 5628913-5630870,5631023-5631047 28 6.7
07_03_1544 - 27585581-27585757,27585986-27586091,27586246-275863... 28 8.9
03_04_0023 + 16537257-16537272,16537515-16537929,16538404-165384... 28 8.9
>01_06_0381 +
28878811-28879120,28880189-28880331,28880753-28881532,
28882568-28883968
Length = 877
Score = 31.9 bits (69), Expect = 0.55
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 450 TEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHERTGR 572
+ E EH SS +H HR + H + EHR RH+R R
Sbjct: 778 SSEDEHEHRSSKSRHR-HRDDYHYHEDDEHRSSHRHQRDHR 817
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/52 (36%), Positives = 23/52 (44%)
Frame = +3
Query: 390 SHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRR 545
S NY+ S +R H E +R H S HKH L R + EP H R
Sbjct: 725 SDEENYDSEESYKHSR-KKHRSEDSRAHTSDVHKHKLKRHS--KDLEPRHHR 773
>03_05_1101 - 30408944-30410410
Length = 488
Score = 31.1 bits (67), Expect = 0.95
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -1
Query: 194 YWSPRAPTALSLGCAAS*ETVLWQVQPETST 102
Y+SPR L+LG AS LW ++PE S+
Sbjct: 294 YFSPRQVRELALGLEASNHPFLWVIRPEDSS 324
>05_05_0227 - 23449579-23450459,23450574-23450691
Length = 332
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = -2
Query: 268 RLDGXGGRPTGPPNDEITPPARTADIGAP 182
R DG GGRP+ P E T P R GAP
Sbjct: 231 RGDGGGGRPSAPARREGTDPCRPVLGGAP 259
>01_06_0140 -
26881282-26881290,26882027-26882128,26882816-26882924,
26883712-26883860,26883941-26884043,26884635-26884810,
26885004-26885066,26885258-26885346,26885428-26885538,
26885610-26885744,26886415-26886580,26886788-26886856,
26886943-26887230,26888612-26888866
Length = 607
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = -2
Query: 577 IRRPVRSCLAMRRCSGSAGGCRFFR*SACLCVLDKCSRLASSV 449
+R R A R C GSAG R R SA V+ + RL + V
Sbjct: 31 LRPAARLSFAPRWCGGSAGAARARRESAVTSVISRAPRLDAEV 73
>02_03_0287 + 17320242-17320481,17323422-17324767,17325124-17325142
Length = 534
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 340 HKTFYHHANFLPQQILPATTQTTILRVPPLLHDVTPTLRKPTAN 471
H+ F +FLP +I L+VPP LH V P P A+
Sbjct: 75 HRWFAQGFHFLPARIPMDGPSGWFLKVPPPLHTVDPPGSPPPAS 118
>01_07_0213 -
42028941-42029055,42029444-42029480,42029876-42030244,
42030332-42031201,42051574-42052891
Length = 902
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +3
Query: 315 SPPATCADSQDILPPCKLLTATNLTSHHANYNFTGSTSLTRCYSHTEEANREHL 476
S PAT + + P +LLT+ TSH + N T S SH + + RE L
Sbjct: 685 SSPATASAAAASKKP-RLLTSQTTTSHTSTSNATTPRSFDTTSSHQDASFRESL 737
>01_01_0140 + 1265785-1265902,1266424-1266845
Length = 179
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = -2
Query: 334 AQVAGGETSA--VAAHPVRENRADRLDGXGGRPTGPPNDEITPPARTADIGAPA 179
A+ AGGE +A A+ NRA R G T D PA A APA
Sbjct: 90 ARAAGGEDAAGGEASRASSANRASRARAAAGEDTVGREDSRASPANRARAAAPA 143
>11_05_0086 + 18964493-18965737,18965896-18966360
Length = 569
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -2
Query: 238 GPPNDEITPPARTADIGAPALRLHFR*GAPPRRRL 134
GPP D PP T + A L H R PP R L
Sbjct: 82 GPPPDPNQPPPFTNVVSAALLARHRRAAVPPLRAL 116
>08_02_0707 - 20212190-20214592
Length = 800
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +3
Query: 390 SHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARH 557
SHH +++ S + S TE + +E+ S H H H + H +E H++ H
Sbjct: 549 SHHHDHHHDSSNEESHHNSLTENSCKENHSHCHGHDHHHHHHHDHSE-HHQQSGDH 603
>10_08_0134 +
15107411-15107939,15108049-15108124,15108332-15108459,
15108960-15109037,15109734-15110263
Length = 446
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 14 FLRLHSDLEWNIKGKPKPLIL*HTEALEHTLTSLVGPATAQSPTRR-RTLAKVQSERGGS 190
F++ S L W IK + +P+IL T E + L+ PA + R T K+ + G +
Sbjct: 191 FIQHTSHLGWKIKKRARPVIL-DTALYEADRSELIRPANLTTNRRNLPTAFKLFTGTGST 249
Query: 191 NIG 199
++G
Sbjct: 250 HLG 252
>07_03_0471 + 18501496-18502104,18503009-18503260,18503367-18503537,
18503693-18503743,18503868-18503960,18504125-18504220,
18504318-18504368,18504452-18504570,18504909-18505017,
18505391-18505513,18505590-18505661,18505963-18506034,
18506125-18506191,18506260-18506402,18506494-18506565,
18506632-18506760,18507317-18507472,18507579-18507692,
18507791-18507889,18507974-18508051,18508402-18508536,
18509081-18509155,18509247-18509361,18509458-18509828,
18509903-18509965,18510049-18510120,18510285-18510413,
18510512-18510628,18510902-18511018
Length = 1289
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = -2
Query: 322 GGETSAVAAHPVRENRADRLDGXGGRPTGPPNDEITPPARTADIGAPALRLHF 164
G A +PV + R+ R G P GPPN P + G P R+ F
Sbjct: 980 GASFGAAGTNPVADKRSGRGKGHSFVPFGPPNGAHKPGVHPS--GYPLPRMPF 1030
>02_01_0759 - 5628913-5630870,5631023-5631047
Length = 660
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/51 (37%), Positives = 23/51 (45%)
Frame = -3
Query: 291 QSARTGQIASTVXEAGRRVRQTTRSRLQHGLPILEPPRSDCTFARVRRLVG 139
Q R+ AS V A VR R R Q P L+ +C F +RRL G
Sbjct: 35 QRKRSLVAASAVAAADCVVRAAKRQRQQRQPPSLDALPDECLFEVLRRLPG 85
>07_03_1544 -
27585581-27585757,27585986-27586091,27586246-27586338,
27587840-27587958,27588486-27588746,27589226-27589515,
27589624-27590152
Length = 524
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 337 SAQVAGGETSAVAAHPVRENRADRLDGXGGRPTG 236
S +GG +A AA V ADR+ G G+P G
Sbjct: 62 SPSPSGGRHAAPAAAAVGSKEADRVAGLPGQPAG 95
>03_04_0023 +
16537257-16537272,16537515-16537929,16538404-16538466,
16538604-16538607
Length = 165
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +3
Query: 420 STSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHE 560
+TSL R H + + H HA H + PP H ++ RHE
Sbjct: 5 ATSLNRSIDHKQGGQQRGTPQQHLHAGHAQE-QPPGH-GHGQVQRHE 49
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,993,566
Number of Sequences: 37544
Number of extensions: 491452
Number of successful extensions: 1687
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1687
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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