Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_D18
         (838 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0155 + 22787658-22787930,22788029-22788096,22789600-227899...    29   4.6  
02_01_0121 + 890391-890429,890565-890730,891209-891769,892365-89...    28   8.0  

>05_05_0155 +
           22787658-22787930,22788029-22788096,22789600-22789915,
           22790207-22790323
          Length = 257

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = -1

Query: 748 PSPGFXVHQPDHQSPXXYTNHPRXNIHFHQSPDAVXEGVRAGV 620
           P P    H P H  P  + + P    H H  PD   E ++A V
Sbjct: 54  PHPPHHPHPPHHPHPPHHPHPPHH--HPHPHPDPAAEAIQANV 94


>02_01_0121 +
           890391-890429,890565-890730,891209-891769,892365-892845,
           892952-893033,893818-894021
          Length = 510

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -1

Query: 676 NIHFHQSPDAVXEGVRAGVKPPLSSEAPSAY 584
           N  FH+   A    V A + PP S  APS +
Sbjct: 127 NFEFHKERGASARSVTAAIVPPFSKPAPSKW 157


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,142,781
Number of Sequences: 37544
Number of extensions: 251704
Number of successful extensions: 506
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 505
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)