Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_D18
         (838 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC021997-1|AAH21997.1|  619|Homo sapiens zinc finger protein 668...    32   3.0  
AK027398-1|BAB55084.1|  619|Homo sapiens protein ( Homo sapiens ...    32   3.0  
AK023541-1|BAB14602.1|  498|Homo sapiens protein ( Homo sapiens ...    32   3.0  
AB209710-1|BAD92947.1|  624|Homo sapiens Hypothetical protein FL...    32   3.0  
BC111532-1|AAI11533.1|  706|Homo sapiens ZNF304 protein protein.       30   9.0  
BC111531-1|AAI11532.1|  617|Homo sapiens ZNF304 protein protein.       30   9.0  
AJ276316-1|CAC06610.1|  659|Homo sapiens zinc finger protein 304...    30   9.0  

>BC021997-1|AAH21997.1|  619|Homo sapiens zinc finger protein 668
           protein.
          Length = 619

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = -2

Query: 639 KEFAPGLSLRCHQRLHQRISPPRHWAWXKGFRPL 538
           K F+   SL CHQR+H    P R  A  KGF  L
Sbjct: 231 KSFSRSSSLTCHQRIHAAQKPYRCPACGKGFTQL 264


>AK027398-1|BAB55084.1|  619|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14492 fis, clone MAMMA1002937, weakly similar to
           ZINC FINGER PROTEIN 135. ).
          Length = 619

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = -2

Query: 639 KEFAPGLSLRCHQRLHQRISPPRHWAWXKGFRPL 538
           K F+   SL CHQR+H    P R  A  KGF  L
Sbjct: 231 KSFSRSSSLTCHQRIHAAQKPYRCPACGKGFTQL 264


>AK023541-1|BAB14602.1|  498|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13479 fis, clone PLACE1003738, weakly similar to
           ZINC FINGER PROTEIN 135. ).
          Length = 498

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = -2

Query: 639 KEFAPGLSLRCHQRLHQRISPPRHWAWXKGFRPL 538
           K F+   SL CHQR+H    P R  A  KGF  L
Sbjct: 110 KSFSRSSSLTCHQRIHAAQKPYRCPACGKGFTQL 143


>AB209710-1|BAD92947.1|  624|Homo sapiens Hypothetical protein
           FLJ14492 variant protein.
          Length = 624

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = -2

Query: 639 KEFAPGLSLRCHQRLHQRISPPRHWAWXKGFRPL 538
           K F+   SL CHQR+H    P R  A  KGF  L
Sbjct: 236 KSFSRSSSLTCHQRIHAAQKPYRCPACGKGFTQL 269


>BC111532-1|AAI11533.1|  706|Homo sapiens ZNF304 protein protein.
          Length = 706

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 19/66 (28%), Positives = 26/66 (39%)
 Frame = -1

Query: 745 SPGFXVHQPDHQSPXXYTNHPRXNIHFHQSPDAVXEGVRAGVKPPLSSEAPSAYLTPSSL 566
           S    VHQ  H     Y  +       H S   + + V  G +P + SE   AY++ S L
Sbjct: 562 SSNLIVHQRIHTGAKPYECNECGKCFSHNSSLILHQRVHTGARPYVCSECGKAYISSSHL 621

Query: 565 GMXKGV 548
              K V
Sbjct: 622 VQHKKV 627


>BC111531-1|AAI11532.1|  617|Homo sapiens ZNF304 protein protein.
          Length = 617

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 19/66 (28%), Positives = 26/66 (39%)
 Frame = -1

Query: 745 SPGFXVHQPDHQSPXXYTNHPRXNIHFHQSPDAVXEGVRAGVKPPLSSEAPSAYLTPSSL 566
           S    VHQ  H     Y  +       H S   + + V  G +P + SE   AY++ S L
Sbjct: 473 SSNLIVHQRIHTGAKPYECNECGKCFSHNSSLILHQRVHTGARPYVCSECGKAYISSSHL 532

Query: 565 GMXKGV 548
              K V
Sbjct: 533 VQHKKV 538


>AJ276316-1|CAC06610.1|  659|Homo sapiens zinc finger protein 304
           protein.
          Length = 659

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 19/66 (28%), Positives = 26/66 (39%)
 Frame = -1

Query: 745 SPGFXVHQPDHQSPXXYTNHPRXNIHFHQSPDAVXEGVRAGVKPPLSSEAPSAYLTPSSL 566
           S    VHQ  H     Y  +       H S   + + V  G +P + SE   AY++ S L
Sbjct: 515 SSNLIVHQRIHTGAKPYECNECGKCFSHNSSLILHQRVHTGARPYVCSECGKAYISSSHL 574

Query: 565 GMXKGV 548
              K V
Sbjct: 575 VQHKKV 580


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,560,115
Number of Sequences: 237096
Number of extensions: 1327330
Number of successful extensions: 3300
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3293
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10538170902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)