Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_D17
         (793 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical pr...   151   6e-37
U39742-3|AAY86225.1|  188|Caenorhabditis elegans Hypothetical pr...    28   6.7  
AL032621-5|CAA21492.2|  404|Caenorhabditis elegans Hypothetical ...    28   6.7  
AL033510-7|CAA22069.1|  124|Caenorhabditis elegans Hypothetical ...    28   8.8  

>Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical
           protein B0393.1 protein.
          Length = 276

 Score =  151 bits (366), Expect = 6e-37
 Identities = 68/125 (54%), Positives = 88/125 (70%), Gaps = 5/125 (4%)
 Frame = -2

Query: 684 AYCGTFHTRCFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFV 505
           A  G F   C TNQIQ  F+EPRLL++ DP  DHQ +TEASYV +PVI+  NT+SPL+ +
Sbjct: 98  AIFGRFSPGCLTNQIQKTFKEPRLLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLI 157

Query: 504 DIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRW-----DVVVDLFFYRDPEESEK 340
           DI +PCN K   SIGLMWW+LARE+L LRG + R   +     +++ DL+FYRDP E+EK
Sbjct: 158 DIGVPCNNKGERSIGLMWWMLAREILILRGKISRQTGFVLEGKEIMPDLYFYRDPTETEK 217

Query: 339 DEQQA 325
           +E  A
Sbjct: 218 EETGA 222



 Score = 62.5 bits (145), Expect = 3e-10
 Identities = 27/44 (61%), Positives = 33/44 (75%)
 Frame = -3

Query: 782 VVAIXNPXDVFVXSSRPFGQRAVXKFAAHTGXTXIAGRFTPGAL 651
           + A+ NP DV V S+RP+ QRA+ KFAAHTG T I GRF+PG L
Sbjct: 65  IAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCL 108


>U39742-3|AAY86225.1|  188|Caenorhabditis elegans Hypothetical
           protein C25F6.8 protein.
          Length = 188

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -2

Query: 534 CNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVL 427
           CNTD+  R +     CNT   + +G+ + L+AR ++
Sbjct: 49  CNTDAEFRLIQCCSSCNT---NGVGIAYDLVARSLV 81


>AL032621-5|CAA21492.2|  404|Caenorhabditis elegans Hypothetical
           protein Y45F3A.8 protein.
          Length = 404

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
 Frame = -1

Query: 562 ICQHSCDCFVQHRLPTKICGHCYPM---QHQVFPLYWFD 455
           +C+HS    +      K CGHC PM   +HQ  P +  D
Sbjct: 342 LCEHSRYKTLMENYCPKACGHCIPMCRDRHQNCPQFHED 380


>AL033510-7|CAA22069.1|  124|Caenorhabditis elegans Hypothetical
           protein Y40H7A.11 protein.
          Length = 124

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 483 TKSSHSIGLMWWLLA 439
           T+  H IG+MWWL A
Sbjct: 72  TRVEHKIGIMWWLCA 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,802,954
Number of Sequences: 27780
Number of extensions: 341220
Number of successful extensions: 910
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)