Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_D15
         (775 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0744 + 35910512-35910569,35911145-35911325,35912332-359124...    28   7.2  
01_05_0351 + 21269339-21269527,21269758-21269961                       28   9.5  

>03_06_0744 +
           35910512-35910569,35911145-35911325,35912332-35912419,
           35912541-35912726,35913591-35913725,35913803-35913862,
           35914609-35914698,35915384-35915515,35916039-35916183,
           35916266-35916439,35916629-35916692,35916778-35916847,
           35917328-35917445,35918258-35918280,35918398-35918499,
           35919831-35920250,35920327-35920563
          Length = 760

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +2

Query: 422 EAIGRGDDLTILRKIINTKIILL*PMVV 505
           EA+G  D+ T+L K++ TK+  + P+ V
Sbjct: 669 EAVGAEDEDTVLTKVVRTKVFEMPPLSV 696


>01_05_0351 + 21269339-21269527,21269758-21269961
          Length = 130

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 17/38 (44%), Positives = 20/38 (52%)
 Frame = +1

Query: 529 NNSPKNYFLLVKAASFCISTSSGLS*PASRQDLQQKLE 642
           NNS  + F     AS C   +S  S PASR  L +KLE
Sbjct: 11  NNSASDDFYSCGEASPCSLAASAPSCPASRLGLSKKLE 48


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,460,337
Number of Sequences: 37544
Number of extensions: 291902
Number of successful extensions: 461
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 461
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)