Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_D15
         (775 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    25   0.59 
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    23   2.4  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   4.2  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   4.2  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   5.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   5.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   5.5  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   7.3  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 25.4 bits (53), Expect = 0.59
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +1

Query: 448 NYIEKNNQYENNIIVTDGCLLTLTRDDNNSPKNYFLLVK 564
           +YIE+NN      I  D   +T+ R  N  P N    +K
Sbjct: 45  DYIEENNMPNGMQIWNDKVFITIPRWKNGVPSNLNFFLK 83


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 451 YIEKNNQYENNIIVTDGCLL 510
           +I KN++YE N I+T   LL
Sbjct: 84  FINKNDKYEENTILTTMPLL 103


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/47 (21%), Positives = 26/47 (55%)
 Frame = -1

Query: 199 PFIY*RIDNKLFMIYFVRCSFCILRFCLLI*IGIARFVVSVSFVIIK 59
           PF Y + D+ + ++     +F     CL++ I +   ++ ++F+I++
Sbjct: 380 PFFYVQEDDDVKLVLL---NFGWQMICLIVVIALVSIIMYIAFIILQ 423


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 413 GTILLFSAINCVILKELYIRLSYE*HHMSTVC 318
           G  LL    NCV+++E    L+     +ST C
Sbjct: 604 GLFLLLDMFNCVVVEETIPSLNSTNVTLSTKC 635


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 173 IIYSLIYKWIFGSNIHK 223
           + Y L+ KWIFG ++ K
Sbjct: 94  VAYLLLGKWIFGIHLCK 110


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 173 IIYSLIYKWIFGSNIHK 223
           + Y L+ KWIFG ++ K
Sbjct: 94  VAYLLLGKWIFGIHLCK 110


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 173 IIYSLIYKWIFGSNIHK 223
           + Y L+ KWIFG ++ K
Sbjct: 94  VAYLLLGKWIFGIHLCK 110


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 240 DKQIIANQIFTGFFKIYSVS 299
           D ++  N+ +  F K+YSVS
Sbjct: 288 DGKLNVNEFYMAFSKLYSVS 307


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,149
Number of Sequences: 438
Number of extensions: 3972
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)