Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_D05
         (787 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   5.6  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   7.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.8  

>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +2

Query: 293 PVHTNYREGLS 325
           PVHT+Y+ GL+
Sbjct: 440 PVHTSYKSGLN 450


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -3

Query: 410 SSGGPRAPRSNTR 372
           ++G PR+P SN+R
Sbjct: 319 NNGSPRSPESNSR 331


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 272  TAL*YDTRGVRTHPGGQKEDR 210
            T L   +R    H GGQ+EDR
Sbjct: 1418 TKLDRSSREREVHNGGQQEDR 1438


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,557
Number of Sequences: 438
Number of extensions: 4138
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)