Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_D03
(776 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1773.10c |||asparagine-tRNA ligase Ded81 |Schizosaccharomyce... 27 3.0
SPCC4B3.03c |||DUF21 domain protein|Schizosaccharomyces pombe|ch... 27 4.0
SPAC821.11 |pro1||gamma-glutamyl phosphate reductase Pro1 |Schiz... 27 4.0
SPBC106.10 |pka1|tpk, git6|cAMP-dependent protein kinase catalyt... 26 6.9
SPBC56F2.05c |||transcription factor |Schizosaccharomyces pombe|... 26 6.9
SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr ... 26 6.9
SPAC2C4.14c |ppk11||PAK-related kinase Ppk11|Schizosaccharomyces... 25 9.2
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 25 9.2
>SPBC1773.10c |||asparagine-tRNA ligase Ded81 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 568
Score = 27.1 bits (57), Expect = 3.0
Identities = 25/115 (21%), Positives = 48/115 (41%)
Frame = -3
Query: 396 AGGAKLPSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRS 217
A A+ +A A +AEA E+ K+++ EP+++ +K+ + R
Sbjct: 89 AAEAEAAAAARAAAAKEAEAKRLEAAKNIVLKEPKDAPAAKKIAIIDSTNFRDSRVRVNG 148
Query: 216 PFGSRRSMLSVFFLTRASRLRRSGYNSVRCRGSE*SVDDFRSWRGVVLGRAASCC 52
R+ + F+ + R G ++C S V D S+ + LG ++ C
Sbjct: 149 WVHRMRTQKGIIFI-----ILRDGTGFLQCVLSG-KVYDRASYDFINLGPESTVC 197
>SPCC4B3.03c |||DUF21 domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 679
Score = 26.6 bits (56), Expect = 4.0
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +1
Query: 541 MGEQSNAWRILLRNDRKSRHRRIKKQRRYERLAATSQLSPVGNFSGTSC*KLFILKDR*A 720
+GE ++ W +L S + K +R LAA ++ +P+ N ++ + DR
Sbjct: 401 VGENNDFWNRMLHRSHLSTMAALHKSQRSHDLAA-NEHAPILNPKNSALNPRLVTNDRVK 459
Query: 721 VLSQSL 738
V S SL
Sbjct: 460 VKSPSL 465
>SPAC821.11 |pro1||gamma-glutamyl phosphate reductase Pro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 451
Score = 26.6 bits (56), Expect = 4.0
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -3
Query: 468 AIVILLSXERNRSFGHLVHALGRAAGGAKLPSAGLCLNASKAEAS 334
A+V+ E +SF L + + A G +K+P A + L S+ E S
Sbjct: 145 AVVLKGGTESAKSFAALSNVVRSALGKSKVPQAAVQLVQSREEVS 189
>SPBC106.10 |pka1|tpk, git6|cAMP-dependent protein kinase catalytic
subunit Pka1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 512
Score = 25.8 bits (54), Expect = 6.9
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +2
Query: 59 DAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSR 238
D +PS P +SS+ S RH + +L S + D LRD + + RVS+
Sbjct: 119 DNLIPSPLPESASRSSSQSSHQRHSRDGRGELGSEHGERRSAMDG--LRDRHIRKVRVSQ 176
>SPBC56F2.05c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 397
Score = 25.8 bits (54), Expect = 6.9
Identities = 31/129 (24%), Positives = 49/129 (37%), Gaps = 1/129 (0%)
Frame = -3
Query: 450 SXERNRSFGHLVHALGRAAGGAKLPSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 271
S +R R + L ++ L S G +S +++ GK+ V P +
Sbjct: 274 SAKRRRPDHNHTSTLDASSSNTSLASTGPMTVSS---STVERKGKEASEVNPNSTSSVTF 330
Query: 270 CDFTSRVSHSKRETRRRSPFGSRRSMLSVFFLTRASRLRRSGYNSVRC-RGSE*SVDDFR 94
DF + +S S+ ++S G R R R +G NS C + V + R
Sbjct: 331 SDFAAAISRSRCSRCKKSKKGCDRQ-------RPCGRCRDAGLNSEDCISDDDMPVSNAR 383
Query: 93 SWRGVVLGR 67
RG GR
Sbjct: 384 KPRGRGRGR 392
>SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1337
Score = 25.8 bits (54), Expect = 6.9
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +2
Query: 17 SSPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLR-SRDARVKKKTDS 193
SS + S SQH L P E+KS D S PR + + R R K D+
Sbjct: 133 SSSSSSSSSQSSQHSTHLQFQIPSNEKKSLDDPS-PRRKPSFFSKSNLKRKYRYLKNPDA 191
Query: 194 IDL 202
+L
Sbjct: 192 WNL 194
>SPAC2C4.14c |ppk11||PAK-related kinase Ppk11|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 312
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 108 VDDFRSWRGVVLGRAASCCDLLRLS 34
VD FR W + SC DLL+LS
Sbjct: 72 VDGFRLWITMEYCDGGSCLDLLKLS 96
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 25.4 bits (53), Expect = 9.2
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 661 VGNFSGTSC*KLFILKDR*AVLSQSL 738
V N G S KLFI+KD V+SQ L
Sbjct: 3489 VFNIGGRSPQKLFIVKDSGQVMSQDL 3514
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,173,266
Number of Sequences: 5004
Number of extensions: 63598
Number of successful extensions: 163
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 375345278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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