Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_D01
(773 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 36 0.005
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 35 0.011
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 30 0.32
SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyce... 29 0.56
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 28 1.3
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 28 1.7
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 28 1.7
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 26 5.2
SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein interm... 26 6.9
SPAC1399.05c |||transcription factor, zf-fungal binuclear cluste... 26 6.9
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 25 9.1
SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces pomb... 25 9.1
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 36.3 bits (80), Expect = 0.005
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -1
Query: 419 FRLYDVERRGAVPASHLRDALHSAGYTVN-AHVLNVLAHRYGTTDGYIQFDDFI 261
F+L+D ++ A+ LR A+ + G+ + VL +L T GY+Q +DF+
Sbjct: 43 FKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQMEDFV 96
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 35.1 bits (77), Expect = 0.011
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = -1
Query: 428 RAVFRLYDVERRGAVPASHLRDALHSAGYTVNAHVLNVLAHRYGTTDGYIQFDDFIMCAV 249
+ F LYD+++ G +P SH+ L S G V L L++ G +F F+ +
Sbjct: 12 KEAFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNELGDAIDEKKFMSFVSNKL 71
Query: 248 R 246
R
Sbjct: 72 R 72
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 30.3 bits (65), Expect = 0.32
Identities = 25/78 (32%), Positives = 33/78 (42%)
Frame = -2
Query: 499 LTRTAPEDLASKSSSPCGSICATGGPCSACTTWSGGGPSPPATCVTLCTRPATRSTHTCS 320
+T T P S +S+P P A T+ +G SP + T CT + S
Sbjct: 301 VTPTVPPTSTSSTSTP---------PPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNS 351
Query: 319 TCWRTDTAPPTGTYSSMT 266
T T T PPT T S+ T
Sbjct: 352 TTPVTPTVPPTSTSSTST 369
Score = 29.9 bits (64), Expect = 0.42
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 1/110 (0%)
Frame = -2
Query: 499 LTRTAPEDLASKSSSPCGSICATGGPCSACTTWSGGGPSPPATCVTLCTRPATRSTHTCS 320
+T T P S +S+P P A T+ +G SP + T CT + S
Sbjct: 355 VTPTVPPTSTSSTSTP---------PPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNS 405
Query: 319 TCWRTDTAPPTGTYSSM-TS*CAPCVSRP*STRSTLDLRVETTPPSRSRS 173
T T T PPT + + + T+ C S P ++ + TT + S S
Sbjct: 406 TTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTS 455
Score = 29.1 bits (62), Expect = 0.74
Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 7/115 (6%)
Frame = -2
Query: 496 TRTAPEDLASKSSSPCGSICATGGPCSACT-------TWSGGGPSPPATCVTLCTRPATR 338
T ++P S S + SI TG + T T S P PPA+ + T +
Sbjct: 273 TNSSPLPTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPL 332
Query: 337 STHTCSTCWRTDTAPPTGTYSSMTS*CAPCVSRP*STRSTLDLRVETTPPSRSRS 173
+ T ++C + + PPTG ++ + P P ST ST T PP S S
Sbjct: 333 PS-TSTSCTTSTSIPPTGNSTTPVTPTVP----PTSTSST-----STPPPPASTS 377
Score = 27.1 bits (57), Expect = 3.0
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 8/118 (6%)
Frame = -2
Query: 502 CLTRT-APEDLASKSSSPCGSICATGGPCS-------ACTTWSGGGPSPPATCVTLCTRP 347
C T T A + ++S+S S TG S +CTT + P+ ++ ++ P
Sbjct: 77 CTTDTSASTPIITESTSSTSSASTTGSSSSPLPSTSTSCTTSTSIPPTGGSSSLSTPITP 136
Query: 346 ATRSTHTCSTCWRTDTAPPTGTYSSMTS*CAPCVSRP*STRSTLDLRVETTPPSRSRS 173
T T ST + PPT T S+ T+ S P T ST + PP+ S
Sbjct: 137 TVPPTSTSST---SIPIPPTSTSSTDTN------SNPLPTTSTSCTTSTSIPPTGGSS 185
Score = 27.1 bits (57), Expect = 3.0
Identities = 23/107 (21%), Positives = 40/107 (37%)
Frame = -2
Query: 499 LTRTAPEDLASKSSSPCGSICATGGPCSACTTWSGGGPSPPATCVTLCTRPATRSTHTCS 320
L T+ S S P G+ P T+ S PP + ++ T +
Sbjct: 332 LPSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLLSTST 391
Query: 319 TCWRTDTAPPTGTYSSMTS*CAPCVSRP*STRSTLDLRVETTPPSRS 179
+C + + PPTG ++ + P S + +T + T+ P S
Sbjct: 392 SCTTSTSIPPTGNSTTPVTPTVPPTSSS-TPLTTTNCTTSTSVPYTS 437
>SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 583
Score = 29.5 bits (63), Expect = 0.56
Identities = 17/80 (21%), Positives = 40/80 (50%)
Frame = -1
Query: 410 YDVERRGAVPASHLRDALHSAGYTVNAHVLNVLAHRYGTTDGYIQFDDFIMCAVRLKTMI 231
Y + ++ A+ + A + GY V+ ++ V+ ++ IQ F++C + +
Sbjct: 395 YHILQKNAIGNLIIAVAGYIPGYWVSVVLIEVMGRKW------IQIQGFLICCLLFGVLA 448
Query: 230 DTFNSRSSGGDYATFSLEEW 171
T+ + S+GG +A +L ++
Sbjct: 449 GTWETISTGGRFACVALAQF 468
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 28.3 bits (60), Expect = 1.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -1
Query: 518 RSMIAMLDKDGSGGLGFEEFKSLWIDL 438
+ A+LDKDG G +G E+ K++ L
Sbjct: 51 KEAFALLDKDGDGNIGREDVKTMLTSL 77
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 27.9 bits (59), Expect = 1.7
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Frame = -2
Query: 535 SPRTSAVA*SRCLTRTAPEDLASKSSSPCGSICATGGPCSACTTWSGGGPSPPATCVTLC 356
S +S+ + S + ++ +S SSS S ++ P ++ T+ S S ++ +
Sbjct: 172 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSS 231
Query: 355 TRPATRS----THTCSTCWRTDTAPPTGTYSSMTS 263
+RP++ S T + ST T T P+ + SS +S
Sbjct: 232 SRPSSSSSFITTMSSSTFISTVTVTPSSSSSSTSS 266
Score = 26.6 bits (56), Expect = 3.9
Identities = 26/114 (22%), Positives = 52/114 (45%)
Frame = -2
Query: 535 SPRTSAVA*SRCLTRTAPEDLASKSSSPCGSICATGGPCSACTTWSGGGPSPPATCVTLC 356
S +S+ + S T T+P +S SSS S ++ S+ ++ S S ++
Sbjct: 138 SSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S 194
Query: 355 TRPATRSTHTCSTCWRTDTAPPTGTYSSMTS*CAPCVSRP*STRSTLDLRVETT 194
+ ++ S+ + S+ T + + + SS +S + SRP S+ S + +T
Sbjct: 195 SSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSFITTMSSST 248
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 27.9 bits (59), Expect = 1.7
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Frame = -1
Query: 533 SKDVCRSMIAMLDKDGSGGLGFEEF-KSLWI------DLRNWRAVFRLYDVERRGAVPAS 375
S + + +++D+DG G + F+EF SL + + F++YD++R G +
Sbjct: 54 SNPLASRLFSVVDEDGGGDVDFQEFINSLSVFSVHGNKEEKLKFAFKIYDIDRDGYISNG 113
Query: 374 HL 369
L
Sbjct: 114 EL 115
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 545 GQGFSKDVCRSMIAMLDKDGSGGLGFEEF 459
G+ S++ MI D DG G + +EEF
Sbjct: 115 GERLSQEEVADMIREADTDGDGVINYEEF 143
>SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein
intermediate chain Dic1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 544
Score = 25.8 bits (54), Expect = 6.9
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -2
Query: 409 TTWSGGGPSPPATCVTLCTRPATRSTHTCST 317
TT GG P T +T P + + TCST
Sbjct: 283 TTIISGGHLEPVTDITYINNPPSNNIVTCST 313
>SPAC1399.05c |||transcription factor, zf-fungal binuclear cluster
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 529
Score = 25.8 bits (54), Expect = 6.9
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -1
Query: 278 QFDDFIMCAVRLKTMI-DTFNSRSSGGDYATFSLEEWLNRTVYS*AEPNP 132
+FD I+ + + +M+ S + DYA F LEEW + +P P
Sbjct: 309 EFDGNILGMLSVYSMLYRMLRSPTLDLDYAIFQLEEWRKEWCHLWEQPEP 358
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 25.4 bits (53), Expect = 9.1
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +3
Query: 327 VCVDRVAGRVQSVTQVAGGDGPPPLHVVQA---EHGPPVAQIDPQG 455
+ V +A +Q TQ +GG P + ++ A E GP + Q+DP G
Sbjct: 109 ILVQEIASVMQESTQ-SGGVRPFGVSLLVAGMDEKGPSLYQVDPSG 153
>SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1283
Score = 25.4 bits (53), Expect = 9.1
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Frame = -2
Query: 367 VTLCTRPATRSTHTCSTCWRTDTAPPTGTYSS---MTS*CAP-CVSRP 236
+ + T ST T W T T P TGT S + S AP C S P
Sbjct: 1080 IVVPTAGTVTSTTGSGTSWFTTTVPATGTRSGSVIVVSPTAPACSSTP 1127
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,728,752
Number of Sequences: 5004
Number of extensions: 53897
Number of successful extensions: 177
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 174
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 373338084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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