Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_C24
         (814 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003150-5|AAB54213.1|  474|Caenorhabditis elegans Hypothetical ...    31   0.74 
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p...    29   5.2  
U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase ...    28   6.9  
U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase ...    28   6.9  
AF039710-8|AAB96686.2|  312|Caenorhabditis elegans Hypothetical ...    28   6.9  

>AF003150-5|AAB54213.1|  474|Caenorhabditis elegans Hypothetical
           protein T05E7.1 protein.
          Length = 474

 Score = 31.5 bits (68), Expect = 0.74
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = -1

Query: 571 KPPLSSEAPSAYLTPSSLGMXKGGFAPLFSSE**ITSFAPY*SSFHAYSAPLLQLTP 401
           KPP     P+    P S GM + G+A + +SE     F  +  ++ AY   L +L P
Sbjct: 182 KPPGKGPFPAVIFIPGSNGMLESGYAAVLASE----GFLTFTFAYFAYKKDLPKLIP 234


>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
           protein T20D3.11 protein.
          Length = 1843

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 720 PYASSHPPLRXRXHQPDHQIPDS 652
           P +S HPPL    H  +H  PD+
Sbjct: 66  PTSSHHPPLNSSSHHSNHNYPDT 88


>U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase
           protein 25, isoformb protein.
          Length = 1130

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +1

Query: 547 EPLMTTEALTPARTPSSTASE 609
           EP++++E L P R PS+T S+
Sbjct: 877 EPILSSEVLQPTRLPSATTSQ 897


>U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase
            protein 25, isoforma protein.
          Length = 1237

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +1

Query: 547  EPLMTTEALTPARTPSSTASE 609
            EP++++E L P R PS+T S+
Sbjct: 984  EPILSSEVLQPTRLPSATTSQ 1004


>AF039710-8|AAB96686.2|  312|Caenorhabditis elegans Hypothetical
           protein C46E10.1 protein.
          Length = 312

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = -3

Query: 677 NPIIKSPIPYTNHPRL--NIHFHQSSDAVLEGV 585
           +P+ KS   Y   P +  NIH+H+++ +V+ GV
Sbjct: 161 SPVDKSTFCYAGVPEVTGNIHYHETNKSVIAGV 193


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,382,994
Number of Sequences: 27780
Number of extensions: 327778
Number of successful extensions: 1005
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1005
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)