Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_C23
         (847 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    30   2.7  
07_01_0479 + 3606663-3607448                                           29   3.5  
01_06_0581 - 30386018-30386440                                         29   4.7  
08_01_0059 - 394001-394708                                             28   8.1  

>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 25/109 (22%), Positives = 33/109 (30%)
 Frame = +2

Query: 437 LPXSXTRLXXDICHNXPDERRIPXAXGGLLVXRPRPXAXQPXPXXXXXXXXXXGRPXPXX 616
           L     +L  ++ H  P +R++P          P P A  P P           +P    
Sbjct: 513 LSTDENQLPPEVQHESPSDRKLPS---------PSPTAAAPPPPPPPPPPPSGNKPA--F 561

Query: 617 XGXXXRKXXSXXPFPPQXFPX*DRPPXXXDPXLXXTSVPSPXXXLRPPP 763
                       P P   +     PP    P L    VPSP     PPP
Sbjct: 562 SPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPP 610


>07_01_0479 + 3606663-3607448
          Length = 261

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 15/39 (38%), Positives = 15/39 (38%)
 Frame = +2

Query: 659 PPQXFPX*DRPPXXXDPXLXXTSVPSPXXXLRPPPPGXF 775
           PP   P   RPP    P      VP       PPPPG F
Sbjct: 170 PPGQMPPPMRPPQMPIPFQRPPGVPPAFPGGPPPPPGPF 208


>01_06_0581 - 30386018-30386440
          Length = 140

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3

Query: 273 SGVRSQVLERLEMRLRSGGGGARRQ 347
           SG+  +V +R+E   R GGGG RR+
Sbjct: 31  SGIEVKVRKRVEKEARMGGGGRRRR 55


>08_01_0059 - 394001-394708
          Length = 235

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = +2

Query: 659 PPQXFPX*DRPPXXXDPXLXXTSVPSPXXXLRPPPP 766
           PP   P    PP    P     + P P   +RPPPP
Sbjct: 2   PPPPPPRRAPPPPATPPPPPRRAPPPPSPPIRPPPP 37


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,223,734
Number of Sequences: 37544
Number of extensions: 292550
Number of successful extensions: 1388
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1356
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)