Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_C09
(782 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0175 + 22966151-22967614 34 0.15
10_08_0793 - 20614583-20614897,20615417-20615660,20617713-206178... 32 0.59
01_06_0381 + 28878811-28879120,28880189-28880331,28880753-288815... 32 0.59
01_07_0213 - 42028941-42029055,42029444-42029480,42029876-420302... 31 1.0
11_01_0044 + 340486-340854,341855-341911,343100-343974,344065-34... 31 1.4
06_01_1095 + 8984363-8984789,8985175-8985416,8985500-8985622,898... 30 2.4
01_06_0140 - 26881282-26881290,26882027-26882128,26882816-268829... 30 2.4
02_05_0482 + 29382696-29383251,29383376-29383692 29 3.2
11_05_0086 + 18964493-18965737,18965896-18966360 29 4.2
08_01_0201 + 1635964-1637010 29 4.2
02_03_0287 + 17320242-17320481,17323422-17324767,17325124-17325142 29 4.2
01_01_0140 + 1265785-1265902,1266424-1266845 29 4.2
12_01_0043 + 344084-344452,346672-347546,347635-348145 29 5.5
08_02_0707 - 20212190-20214592 29 5.5
09_06_0239 - 21794691-21795986 28 9.6
03_04_0023 + 16537257-16537272,16537515-16537929,16538404-165384... 28 9.6
>05_05_0175 + 22966151-22967614
Length = 487
Score = 33.9 bits (74), Expect = 0.15
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Frame = +2
Query: 155 P*RKC---SRSAGAPISAVRAGGVISSFGGPVGRPPXQSRRS-ARFSRTGWAATAEVSPP 322
P R C S +AG P SA R GG S G P PP +R+ FS W ++ V
Sbjct: 75 PRRSCCGSSSAAGTPRSAARCGGG-GSPGAPPSSPPLSPQRTHVPFS---WESSPGVPKD 130
Query: 323 ATCADS--QDILPP 358
A C +++LPP
Sbjct: 131 AACGRKVVREVLPP 144
>10_08_0793 -
20614583-20614897,20615417-20615660,20617713-20617899,
20618508-20618547,20618699-20618775,20618965-20619091
Length = 329
Score = 31.9 bits (69), Expect = 0.59
Identities = 27/86 (31%), Positives = 35/86 (40%)
Frame = +2
Query: 362 KLLTATNLTSHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHR 541
++ T L HH N RC+S ++ A L H H ++ L P E E R
Sbjct: 98 QIWTDMQLQDHHHECN----GPYCRCHSSSKHAKGSLLLLHHHH--QQQQLQRPNEMETR 151
Query: 542 RIARHERTGRLILQVTTNSDVSIFLP 619
R +TG L Q DVS LP
Sbjct: 152 RAEASTQTGFLRSQGICERDVSSGLP 177
>01_06_0381 +
28878811-28879120,28880189-28880331,28880753-28881532,
28882568-28883968
Length = 877
Score = 31.9 bits (69), Expect = 0.59
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 449 TEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHERTGR 571
+ E EH SS +H HR + H + EHR RH+R R
Sbjct: 778 SSEDEHEHRSSKSRHR-HRDDYHYHEDDEHRSSHRHQRDHR 817
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/52 (36%), Positives = 23/52 (44%)
Frame = +2
Query: 389 SHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRR 544
S NY+ S +R H E +R H S HKH L R + EP H R
Sbjct: 725 SDEENYDSEESYKHSR-KKHRSEDSRAHTSDVHKHKLKRHS--KDLEPRHHR 773
>01_07_0213 -
42028941-42029055,42029444-42029480,42029876-42030244,
42030332-42031201,42051574-42052891
Length = 902
Score = 31.1 bits (67), Expect = 1.0
Identities = 25/72 (34%), Positives = 34/72 (47%)
Frame = +2
Query: 260 SRRSARFSRTGWAATAEVSPPATCADSQDILPPCKLLTATNLTSHHANYNFTGSTSLTRC 439
+RR R TG A+ S PAT + + P +LLT+ TSH + N T S
Sbjct: 671 ARRRERQQLTGSAS----SSPATASAAAASKKP-RLLTSQTTTSHTSTSNATTPRSFDTT 725
Query: 440 YSHTEEANREHL 475
SH + + RE L
Sbjct: 726 SSHQDASFRESL 737
>11_01_0044 +
340486-340854,341855-341911,343100-343974,344065-344398,
345553-345645,345913-346062
Length = 625
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/71 (29%), Positives = 29/71 (40%)
Frame = +2
Query: 221 SSFGGPVGRPPXQSRRSARFSRTGWAATAEVSPPATCADSQDILPPCKLLTATNLTSHHA 400
S FG + P RR F+RTGW A A V P + L+ T L +
Sbjct: 419 SFFGRLLSALPDFLRRKVSFARTGWLAAALVPMPMAFFLMWKLHDVNTLVAGTALIGLSS 478
Query: 401 NYNFTGSTSLT 433
+ F + S+T
Sbjct: 479 GFIFAAAVSVT 489
>06_01_1095 +
8984363-8984789,8985175-8985416,8985500-8985622,
8985783-8985899,8986258-8986399,8986587-8986627,
8987194-8987453,8987505-8987607,8987698-8987776,
8987856-8988115
Length = 597
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = +1
Query: 100 TLTSLVGPATAQSPTRRRTLAQVQPERGGSNIGSP 204
TL L+ PA A SPTRRR L + P SN GSP
Sbjct: 25 TLPRLL-PAAAPSPTRRRRL--LAPLAAASNSGSP 56
>01_06_0140 -
26881282-26881290,26882027-26882128,26882816-26882924,
26883712-26883860,26883941-26884043,26884635-26884810,
26885004-26885066,26885258-26885346,26885428-26885538,
26885610-26885744,26886415-26886580,26886788-26886856,
26886943-26887230,26888612-26888866
Length = 607
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = -3
Query: 576 IRRPVRSCLAMRRCSGSAGGCRFFR*SACLCVLDKCSRLASSV 448
+R R A R C GSAG R R SA V+ + RL + V
Sbjct: 31 LRPAARLSFAPRWCGGSAGAARARRESAVTSVISRAPRLDAEV 73
>02_05_0482 + 29382696-29383251,29383376-29383692
Length = 290
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/69 (31%), Positives = 26/69 (37%)
Frame = +2
Query: 146 GGAP*RKCSRSAGAPISAVRAGGVISSFGGPVGRPPXQSRRSARFSRTGWAATAEVSPPA 325
G P R P S R GG GG + R+ARFS T A AEV +
Sbjct: 33 GNFPWLSRKRLGAKPPSPQRRGGQEREGGGDEAAGMGTTTRAARFSATSSAEPAEVQSSS 92
Query: 326 TCADSQDIL 352
+ D L
Sbjct: 93 SSRKRADAL 101
>11_05_0086 + 18964493-18965737,18965896-18966360
Length = 569
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -3
Query: 237 GPPNDEITPPARTADIGAPALRLHLR*GAPPRRRL 133
GPP D PP T + A L H R PP R L
Sbjct: 82 GPPPDPNQPPPFTNVVSAALLARHRRAAVPPLRAL 116
>08_01_0201 + 1635964-1637010
Length = 348
Score = 29.1 bits (62), Expect = 4.2
Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = -3
Query: 336 SAQVAGGETSAVAAHPVRENRADRL--DCXGGRPTGPPNDEITPPARTADIGAPALRLHL 163
SA + G + A+ A R DRL DC R G P P AD+ P L HL
Sbjct: 107 SAAMYGVKVEAIQALQANYVRRDRLTIDC-AVRVVGKPRVSAAAPLTAADVPPPDLAAHL 165
>02_03_0287 + 17320242-17320481,17323422-17324767,17325124-17325142
Length = 534
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 339 HKTFYHHANFLPQQILPATTQTTILRVPPLLHDVTPTLRKPTAN 470
H+ F +FLP +I L+VPP LH V P P A+
Sbjct: 75 HRWFAQGFHFLPARIPMDGPSGWFLKVPPPLHTVDPPGSPPPAS 118
>01_01_0140 + 1265785-1265902,1266424-1266845
Length = 179
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = -3
Query: 333 AQVAGGETSA--VAAHPVRENRADRLDCXGGRPTGPPNDEITPPARTADIGAPA 178
A+ AGGE +A A+ NRA R G T D PA A APA
Sbjct: 90 ARAAGGEDAAGGEASRASSANRASRARAAAGEDTVGREDSRASPANRARAAAPA 143
>12_01_0043 + 344084-344452,346672-347546,347635-348145
Length = 584
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/71 (28%), Positives = 28/71 (39%)
Frame = +2
Query: 221 SSFGGPVGRPPXQSRRSARFSRTGWAATAEVSPPATCADSQDILPPCKLLTATNLTSHHA 400
S FG + P R F+RTGW A A V P + L+ T L +
Sbjct: 400 SFFGRLLSALPDFLHRKVSFARTGWLAAALVPMPMAFFLMWKLHDVNTLVAGTALIGLSS 459
Query: 401 NYNFTGSTSLT 433
+ F + S+T
Sbjct: 460 GFIFAAAVSVT 470
>08_02_0707 - 20212190-20214592
Length = 800
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +2
Query: 389 SHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARH 556
SHH +++ S + S TE + +E+ S H H H + H +E H++ H
Sbjct: 549 SHHHDHHHDSSNEESHHNSLTENSCKENHSHCHGHDHHHHHHHDHSE-HHQQSGDH 603
>09_06_0239 - 21794691-21795986
Length = 431
Score = 27.9 bits (59), Expect = 9.6
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +2
Query: 278 FSRTGWAATAEVSPPATC-ADSQDILPPCKLLTATNLTSHHANYNFTGSTSLTRCYSHTE 454
F T + P +C A + D+ P K T NLTS NY ++ S T Y TE
Sbjct: 105 FDTTSDLLWTQCQPCLSCVAQAGDMYDPNKTETYANLTSSSYNYTYS-KQSFTSGYFATE 163
>03_04_0023 +
16537257-16537272,16537515-16537929,16538404-16538466,
16538604-16538607
Length = 165
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 419 STSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHE 559
+TSL R H + + H HA H + PP H ++ RHE
Sbjct: 5 ATSLNRSIDHKQGGQQRGTPQQHLHAGHAQE-QPPGH-GHGQVQRHE 49
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,279,078
Number of Sequences: 37544
Number of extensions: 519463
Number of successful extensions: 1837
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1837
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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