Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_C01
         (730 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66564-2|CAA91474.1|  248|Caenorhabditis elegans Hypothetical pr...   125   4e-29
Z73910-2|CAA98138.1|  248|Caenorhabditis elegans Hypothetical pr...   123   2e-28
U05038-1|AAA61872.1|  248|Caenorhabditis elegans 14-3-3 protein ...   123   2e-28
Z66564-5|CAC42300.2|  198|Caenorhabditis elegans Hypothetical pr...    47   2e-05

>Z66564-2|CAA91474.1|  248|Caenorhabditis elegans Hypothetical
           protein F52D10.3a protein.
          Length = 248

 Score =  125 bits (301), Expect = 4e-29
 Identities = 62/82 (75%), Positives = 66/82 (80%), Gaps = 2/82 (2%)
 Frame = -3

Query: 575 PKXXGXAXNXSVXYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 396
           P   G A N SV +YEILN+PDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDN
Sbjct: 167 PIRLGLALNFSVFFYEILNAPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 226

Query: 395 LTLWTSDTQGDGDE--PAEGGD 336
           LTLWTSD   D  +    EGG+
Sbjct: 227 LTLWTSDAATDDTDANETEGGN 248


>Z73910-2|CAA98138.1|  248|Caenorhabditis elegans Hypothetical
           protein M117.2 protein.
          Length = 248

 Score =  123 bits (296), Expect = 2e-28
 Identities = 61/78 (78%), Positives = 64/78 (82%)
 Frame = -3

Query: 575 PKXXGXAXNXSVXYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 396
           P   G A N SV YYEILN+P+ ACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDN
Sbjct: 166 PIRLGLALNFSVFYYEILNTPEHACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 225

Query: 395 LTLWTSDTQGDGDEPAEG 342
           LTLWTSD  G  D+  EG
Sbjct: 226 LTLWTSDV-GAEDQEQEG 242


>U05038-1|AAA61872.1|  248|Caenorhabditis elegans 14-3-3 protein
           protein.
          Length = 248

 Score =  123 bits (296), Expect = 2e-28
 Identities = 61/78 (78%), Positives = 64/78 (82%)
 Frame = -3

Query: 575 PKXXGXAXNXSVXYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 396
           P   G A N SV YYEILN+P+ ACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDN
Sbjct: 166 PIRLGLALNFSVFYYEILNTPEHACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 225

Query: 395 LTLWTSDTQGDGDEPAEG 342
           LTLWTSD  G  D+  EG
Sbjct: 226 LTLWTSDV-GAEDQEQEG 242


>Z66564-5|CAC42300.2|  198|Caenorhabditis elegans Hypothetical
           protein F52D10.3b protein.
          Length = 198

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 21/30 (70%), Positives = 23/30 (76%)
 Frame = -3

Query: 575 PKXXGXAXNXSVXYYEILNSPDKACQLAKQ 486
           P   G A N SV +YEILN+PDKACQLAKQ
Sbjct: 167 PIRLGLALNFSVFFYEILNAPDKACQLAKQ 196


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,807,359
Number of Sequences: 27780
Number of extensions: 177452
Number of successful extensions: 644
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 644
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)