Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_B22
(779 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0830 - 7678038-7678444,7678996-7680943,7681231-7681983,768... 32 0.44
05_06_0122 - 25775652-25775936,25776027-25776103,25776177-257762... 30 1.8
04_04_1023 + 30201374-30201487,30201601-30202285,30202402-302025... 30 1.8
05_04_0224 - 19198722-19198835,19198947-19199436,19200478-192006... 29 3.1
12_02_1174 - 26696869-26698191 29 4.1
07_03_1389 + 26212117-26212119,26212721-26212875,26213402-262134... 29 4.1
11_02_0059 - 7883980-7884141,7884423-7884467,7884629-7884715,788... 29 5.5
05_07_0031 - 27183252-27183317,27183542-27184282 29 5.5
05_01_0570 + 5061600-5062142,5062790-5062972 29 5.5
04_04_1330 - 32700333-32700770 28 7.2
02_05_0781 + 31715100-31715672 28 7.2
09_04_0082 + 14408962-14409436,14413356-14413780,14414067-14414528 28 9.6
08_01_0554 - 4851698-4851943,4852041-4852760 28 9.6
05_07_0104 + 27715123-27715350 28 9.6
02_03_0093 - 15120951-15121344,15121658-15121953,15122119-151224... 28 9.6
>12_01_0830 -
7678038-7678444,7678996-7680943,7681231-7681983,
7682701-7682824,7683590-7683723
Length = 1121
Score = 32.3 bits (70), Expect = 0.44
Identities = 21/50 (42%), Positives = 23/50 (46%)
Frame = +2
Query: 131 RAHPLNDSPXTLTPDVRSPSGVRTRSE*GGSRGQHYNQTRGATPRTPDRR 280
R P TLTP RSPS R S G N TRGA+P +RR
Sbjct: 141 RRSPTPPGNKTLTPPRRSPSPASRRMS-ATSSGPTLNGTRGASPVKTNRR 189
>05_06_0122 -
25775652-25775936,25776027-25776103,25776177-25776281,
25776353-25776542,25776617-25776804,25776882-25777191
Length = 384
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/80 (28%), Positives = 30/80 (37%), Gaps = 1/80 (1%)
Frame = +1
Query: 241 PDTRRHPEDARP-TGRRGDSRRPTTSVSAVRRPYQAARAVPLVFRDTPLGQNQPAGSERD 417
P HP D +P T S P T Q+A A ++ P G AG +
Sbjct: 11 PSVEDHPSDNQPATDNVEPSNEPPTG-------NQSAEAEVGANQEPPTGNQSDAGPSQK 63
Query: 418 TPPTGLLFNSMFGDDSDDEN 477
P NS G D+D E+
Sbjct: 64 VPEVEAQTNSPLGKDADSES 83
>04_04_1023 +
30201374-30201487,30201601-30202285,30202402-30202506,
30202561-30203939
Length = 760
Score = 30.3 bits (65), Expect = 1.8
Identities = 32/110 (29%), Positives = 41/110 (37%), Gaps = 4/110 (3%)
Frame = +1
Query: 37 SYEVPAPRGRAGYVRLNDLQVLRADRGPKXF*GPPTK--RLPXHSYTRRPISVRGQNPFR 210
S + P PRGR G VR + L +R D G + + P H RR S R +
Sbjct: 105 SKDAPLPRGRRGTVRSSKL--IRPDDGEEEGKEDENRGENAPVHGEGRRGASRRARAEPV 162
Query: 211 VGGFPRSTLQPDTRRHPEDARPTGRRGDS--RRPTTSVSAVRRPYQAARA 354
V R P ++ D + RRP TS A P RA
Sbjct: 163 VAPTTRRRAAPTSKIETGDVAVEAPPAPTTRRRPQTSTEAAPAPTTRRRA 212
>05_04_0224 -
19198722-19198835,19198947-19199436,19200478-19200641,
19202534-19202632,19204069-19204175,19204278-19204401,
19205113-19205242,19205314-19205433,19205861-19206002,
19207243-19207326,19207651-19207742,19207855-19207944,
19208057-19208136,19208312-19208451,19208587-19209067
Length = 818
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 504 PTRRPVLLVPAR*-SDGSVRRSLNPLRLPRDHHRXGDCLLIGAGAGQRPSPTPARRRRHG 680
P +LL P+R S S L P P H G LL+ G +R +P+P RRR H
Sbjct: 2 PHSLSLLLAPSRALSLSSPPLRLAPTHPPLRLHHDGGHLLV--GTTRRQAPSPRRRRLHA 59
Query: 681 PK 686
+
Sbjct: 60 AR 61
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.1 bits (62), Expect = 4.1
Identities = 23/101 (22%), Positives = 38/101 (37%), Gaps = 4/101 (3%)
Frame = +1
Query: 136 PPTKRLPXHSYTRRPISVRGQNPFRVGGFPRSTLQPDTRRHPED----ARPTGRRGDSRR 303
PP + P Y P ++ + G P S+ P T+ P P GD R
Sbjct: 302 PPPPQQPSQRYWTPPPAITPEPAKPAAGKPTSSSPPSTKDSPRPPLPAPSPAANGGDPRL 361
Query: 304 PTTSVSAVRRPYQAARAVPLVFRDTPLGQNQPAGSERDTPP 426
P T+ + ++ + R +G+ A +E + PP
Sbjct: 362 PATTPLSKQKRKEEKREK----EAQEMGRAGAAAAEEERPP 398
>07_03_1389 +
26212117-26212119,26212721-26212875,26213402-26213479,
26214211-26214375,26214453-26214554,26214661-26214786,
26215454-26215490
Length = 221
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 179 RSPSGVRTRSE*GGSRGQHYNQTRGATPR 265
+ PS +R+R GSRG+ Y+Q +PR
Sbjct: 122 KKPSEMRSRDRISGSRGRSYDQRYSRSPR 150
>11_02_0059 -
7883980-7884141,7884423-7884467,7884629-7884715,
7885746-7885874,7885995-7886151,7886248-7886350,
7887050-7887103,7887334-7887451,7888549-7888700,
7890166-7891852
Length = 897
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 198 EPVQSRGVPAVNTTTRHAAPPRGRPTDGSS 287
E + +RG T +HA PPRG P G +
Sbjct: 119 EKMMTRGRAETETARKHAPPPRGLPLLGEA 148
>05_07_0031 - 27183252-27183317,27183542-27184282
Length = 268
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = +3
Query: 483 LHRSPQPPTRRPVLLVPAR*SDGSVRRSLNPLRLPRDHHRXGDCLLIGAGAGQRPSPTPA 662
L P PP P+L + +DG+ R P L + R + A A P P+ +
Sbjct: 147 LKAPPPPPPPPPLLPMAQPQADGAAR----PWNLRQRTRRRPAASMSWAAAAAVPVPSSS 202
Query: 663 RRRRHGP 683
RRR+ P
Sbjct: 203 RRRKRAP 209
>05_01_0570 + 5061600-5062142,5062790-5062972
Length = 241
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 211 VGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTS 315
VGG ++ RR P TG G +RRPT++
Sbjct: 159 VGGARGRAVRGSARRRPRKEETTGINGTARRPTST 193
>04_04_1330 - 32700333-32700770
Length = 145
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 179 RSPSGVRTRSE*GGSRGQHYNQTRGATPRTPDRRVVEAIVDDQR 310
R G E GG R +H + A+P P+R VV + + +R
Sbjct: 22 RRRGGGSDGEELGGGRDEHEGERERASPVEPEREVVGVVGERER 65
>02_05_0781 + 31715100-31715672
Length = 190
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +3
Query: 204 VQSRGVPAVNTTTRHAAPPRGRPTDGSSRR*STT 305
V + P RHAA P RP+ +SRR STT
Sbjct: 51 VSAAAQPQRAAKKRHAAAPPPRPSASTSRRSSTT 84
>09_04_0082 + 14408962-14409436,14413356-14413780,14414067-14414528
Length = 453
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = -3
Query: 414 AFRPGRLVLAQRGIPEHQRHRPGGLVGPPYRG 319
AFR L A RG E Q+ GG GP YRG
Sbjct: 47 AFRYEALSAATRGFSERQKLGQGGF-GPVYRG 77
>08_01_0554 - 4851698-4851943,4852041-4852760
Length = 321
Score = 27.9 bits (59), Expect = 9.6
Identities = 19/40 (47%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 346 ARAVPLVFRDTPLGQNQPAG-SERDTPPTGLLFNSMFGDD 462
AR + F D LG N PAG E DTP LL F DD
Sbjct: 164 ARERGMSFGDALLGNNHPAGLREIDTP---LLDEKFFSDD 200
>05_07_0104 + 27715123-27715350
Length = 75
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 305 GRRLSPRRPVGRASSGWRRVS 243
GRRL P P R W RVS
Sbjct: 31 GRRLHPPAPAARGGGAWNRVS 51
>02_03_0093 -
15120951-15121344,15121658-15121953,15122119-15122419,
15123233-15123628,15123883-15124067
Length = 523
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 177 SDLRPGSEPVQSRGVPAVNTTTRHAAPPR--GRPTDGSSRR*STT 305
S+ +PG PV++ G+ + +T R PPR G P S R S++
Sbjct: 416 SESQPGQAPVRTGGMRLMTSTGRDNQPPRSSGVPPSPSEWRSSSS 460
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,695,663
Number of Sequences: 37544
Number of extensions: 458249
Number of successful extensions: 1794
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1790
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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