Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_B19
(858 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 35 0.065
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 35 0.065
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 35 0.085
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 33 0.20
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.20
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.20
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.20
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.26
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.26
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 33 0.34
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.34
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.34
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.34
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 32 0.60
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 31 0.79
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 0.79
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 0.79
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.1
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 31 1.1
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 31 1.1
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.4
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 30 1.8
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 30 1.8
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 30 1.8
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 1.8
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 30 2.4
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 30 2.4
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 30 2.4
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 30 2.4
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z30215-9|CAB54247.1| 1037|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z30215-8|CAA82941.1| 1040|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z29121-4|CAB54514.1| 1037|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z29121-3|CAA82389.1| 1040|Caenorhabditis elegans Hypothetical pr... 29 3.2
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 3.2
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 29 4.2
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 4.2
AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical ... 29 4.2
AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical ... 29 4.2
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 5.6
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 5.6
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 29 5.6
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 5.6
U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-li... 29 5.6
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 5.6
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 29 5.6
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 5.6
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 5.6
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 29 5.6
AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen pro... 29 5.6
X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein. 28 7.4
U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter... 28 7.4
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 28 7.4
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 28 7.4
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 28 7.4
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 28 7.4
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z81048-9|CAI79126.1| 560|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z81048-8|CAB51463.1| 602|Caenorhabditis elegans Hypothetical pr... 28 9.8
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 28 9.8
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 28 9.8
U27312-10|AAA68253.1| 231|Caenorhabditis elegans Hypothetical p... 28 9.8
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 28 9.8
AF039570-1|AAC00000.1| 602|Caenorhabditis elegans aryl hydrocar... 28 9.8
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 35.1 bits (77), Expect = 0.065
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -3
Query: 679 CGGXXGXPGXGXGXXGGGRGXCXGXWGXXG 590
CGG G G G G GGG G C G G G
Sbjct: 103 CGGGGGGCGGGGGGCGGGGGGCGGGGGGCG 132
Score = 35.1 bits (77), Expect = 0.065
Identities = 28/89 (31%), Positives = 28/89 (31%)
Frame = -1
Query: 768 GRGAXXCEGXGGSXEGXAXXAVGXRXGXXFVAGXXXXPGXXXGXXGXGGXXVPGGGGGXG 589
G G C G GG G G G G G G GG GGGGG G
Sbjct: 111 GGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGG 170
Query: 588 RXXXXXLXRGXAAXX*DPSXXXXXFGGGS 502
G A PS GGGS
Sbjct: 171 CGGGSSGGGGYAVA---PSGGGGCGGGGS 196
Score = 33.5 bits (73), Expect = 0.20
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -3
Query: 679 CGGXXGXPGXGXGXXGGGRGXCXGXWG 599
CGG G G G G GGG G C G G
Sbjct: 110 CGGGGGGCGGGGGGCGGGGGGCGGGGG 136
Score = 32.7 bits (71), Expect = 0.34
Identities = 21/60 (35%), Positives = 21/60 (35%)
Frame = -1
Query: 768 GRGAXXCEGXGGSXEGXAXXAVGXRXGXXFVAGXXXXPGXXXGXXGXGGXXVPGGGGGXG 589
G G C G GG G G G G G G G GG GGGGG G
Sbjct: 84 GGGGGGCGGGGGGCGGGGGCGGG---GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCG 140
Score = 31.9 bits (69), Expect = 0.60
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -3
Query: 679 CGGXXGXPGXGXGXXGGGRGXCXGXWGXXG 590
CGG G G G G GGG G C G G G
Sbjct: 97 CGGGGGC-GGGGGGCGGGGGGCGGGGGGCG 125
Score = 31.5 bits (68), Expect = 0.79
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -3
Query: 679 CGGXXGXPGXGXGXXGGGRGXCXGXWGXXGXVXXXGFXPWXGG 551
CGG G G G G GGG G G G G G GG
Sbjct: 79 CGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGG 121
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = -1
Query: 768 GRGAXXCEGXGGSXEGXAXXAVGXRXGXXFVAGXXXXPGXXXGXXGXGGXXVPGGGGGXG 589
G G C G GG G G G G G G G G GGGGG G
Sbjct: 104 GGGGGGCGGGGGGC-GGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGG 162
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = -1
Query: 750 CEGXGGSXEGXAXXAVGXRXGXXFVAGXXXXPGXXXGXXGXGGXXVPGGGGGXG 589
C G GG G G G G G G G GG GGGGG G
Sbjct: 83 CGGGGGGCGGGG----GGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCG 132
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/63 (34%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
Frame = -1
Query: 771 GGRGAXXCEGXGGSXEGXAXXAVGXRXGXXFVAGXXXXPGXXXGXX-GXGGXXV-PGGGG 598
GG G C G GG G G G + G G G GG V P GGG
Sbjct: 156 GGGGGGGCGGGGGGGCGG-----GSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGG 210
Query: 597 GXG 589
G G
Sbjct: 211 GCG 213
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 35.1 bits (77), Expect = 0.065
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -3
Query: 679 CGGXXGXPGXGXGXXGGGRGXCXGXWGXXG 590
CGG G G G G GGG G C G G G
Sbjct: 103 CGGGGGGCGGGGGGCGGGGGGCGGGGGGCG 132
Score = 35.1 bits (77), Expect = 0.065
Identities = 28/89 (31%), Positives = 28/89 (31%)
Frame = -1
Query: 768 GRGAXXCEGXGGSXEGXAXXAVGXRXGXXFVAGXXXXPGXXXGXXGXGGXXVPGGGGGXG 589
G G C G GG G G G G G G GG GGGGG G
Sbjct: 111 GGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGG 170
Query: 588 RXXXXXLXRGXAAXX*DPSXXXXXFGGGS 502
G A PS GGGS
Sbjct: 171 CGGGSSGGGGYAVA---PSGGGGCGGGGS 196
Score = 33.5 bits (73), Expect = 0.20
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -3
Query: 679 CGGXXGXPGXGXGXXGGGRGXCXGXWG 599
CGG G G G G GGG G C G G
Sbjct: 110 CGGGGGGCGGGGGGCGGGGGGCGGGGG 136
Score = 32.7 bits (71), Expect = 0.34
Identities = 21/60 (35%), Positives = 21/60 (35%)
Frame = -1
Query: 768 GRGAXXCEGXGGSXEGXAXXAVGXRXGXXFVAGXXXXPGXXXGXXGXGGXXVPGGGGGXG 589
G G C G GG G G G G G G G GG GGGGG G
Sbjct: 84 GGGGGGCGGGGGGCGGGGGCGGG---GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCG 140
Score = 31.9 bits (69), Expect = 0.60
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -3
Query: 679 CGGXXGXPGXGXGXXGGGRGXCXGXWGXXG 590
CGG G G G G GGG G C G G G
Sbjct: 97 CGGGGGC-GGGGGGCGGGGGGCGGGGGGCG 125
Score = 31.5 bits (68), Expect = 0.79
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -3
Query: 679 CGGXXGXPGXGXGXXGGGRGXCXGXWGXXGXVXXXGFXPWXGG 551
CGG G G G G GGG G G G G G GG
Sbjct: 79 CGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGG 121
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = -1
Query: 768 GRGAXXCEGXGGSXEGXAXXAVGXRXGXXFVAGXXXXPGXXXGXXGXGGXXVPGGGGGXG 589
G G C G GG G G G G G G G G GGGGG G
Sbjct: 104 GGGGGGCGGGGGGC-GGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGG 162
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = -1
Query: 750 CEGXGGSXEGXAXXAVGXRXGXXFVAGXXXXPGXXXGXXGXGGXXVPGGGGGXG 589
C G GG G G G G G G G GG GGGGG G
Sbjct: 83 CGGGGGGCGGGG----GGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCG 132
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/63 (34%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
Frame = -1
Query: 771 GGRGAXXCEGXGGSXEGXAXXAVGXRXGXXFVAGXXXXPGXXXGXX-GXGGXXV-PGGGG 598
GG G C G GG G G G + G G G GG V P GGG
Sbjct: 156 GGGGGGGCGGGGGGGCGG-----GSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGG 210
Query: 597 GXG 589
G G
Sbjct: 211 GCG 213
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 34.7 bits (76), Expect = 0.085
Identities = 24/65 (36%), Positives = 24/65 (36%)
Frame = -3
Query: 745 GXGRVXGRGXXXRXGKXIXXXFCGGXXGXPGXGXGXXGGGRGXCXGXWGXXGXVXXXGFX 566
G GR GRG G GG G G G GGGRG G G G G
Sbjct: 56 GWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRG--GGGRGDWGGNNNGGGG 113
Query: 565 PWXGG 551
W GG
Sbjct: 114 NWGGG 118
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/50 (38%), Positives = 19/50 (38%)
Frame = -3
Query: 679 CGGXXGXPGXGXGXXGGGRGXCXGXWGXXGXVXXXGFXPWXGGXXXRPXP 530
CGG G G G G GGG G G G G G GG P P
Sbjct: 65 CGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPP 114
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/62 (35%), Positives = 22/62 (35%)
Frame = -1
Query: 771 GGRGAXXCEGXGGSXEGXAXXAVGXRXGXXFVAGXXXXPGXXXGXXGXGGXXVPGGGGGX 592
GG G C G GG G G G G G G G GG G GGG
Sbjct: 134 GGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGG---GCGGGC 190
Query: 591 GR 586
GR
Sbjct: 191 GR 192
Score = 33.5 bits (73), Expect = 0.20
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -3
Query: 679 CGGXXGXPGXGXGXXGGGRGXCXGXWG 599
CGG G G G G GGG G C G G
Sbjct: 149 CGGGGGGCGGGGGGCGGGGGGCGGGGG 175
Score = 33.1 bits (72), Expect = 0.26
Identities = 18/43 (41%), Positives = 18/43 (41%)
Frame = -3
Query: 679 CGGXXGXPGXGXGXXGGGRGXCXGXWGXXGXVXXXGFXPWXGG 551
CGG G G G G GGG G C G G G P GG
Sbjct: 79 CGGGGGC-GGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGG 120
Score = 32.7 bits (71), Expect = 0.34
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -3
Query: 676 GGXXGXPGXGXGXXGGGRGXCXGXWGXXGXVXXXGFXPWXGG 551
GG G G G G GGG G C G G G G GG
Sbjct: 143 GGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGG 184
Score = 31.9 bits (69), Expect = 0.60
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -3
Query: 679 CGGXXGXPGXGXGXXGGGRGXCXGXWGXXG 590
CGG G G G G GGG G C G G G
Sbjct: 129 CGGGCGG-GGGGGCGGGGGGGCGGGGGGCG 157
Score = 31.5 bits (68), Expect = 0.79
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -3
Query: 679 CGGXXGXPGXGXGXXGGGRGXCXGXWGXXGXVXXXGFXPWXGG 551
CGG G G G G GGG G G G G G GG
Sbjct: 61 CGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGG 103
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/85 (30%), Positives = 26/85 (30%), Gaps = 2/85 (2%)
Frame = -3
Query: 847 GGGTXGXXXG*VXXGXXXXGXRXXXWXERGVXV*GXGRVXGRGXXXRXGKXIXXXFCGGX 668
GGG G G G G G G G G G CGG
Sbjct: 62 GGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGG 121
Query: 667 XGXPGXGXGXX--GGGRGXCXGXWG 599
G G G G GGG G C G G
Sbjct: 122 CGGGGGGCGGGCGGGGGGGCGGGGG 146
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = -1
Query: 750 CEGXGGSXEGXAXXAVGXRXGXXFVAGXXXXPGXXXGXXGXGGXXVPGGGGGXG 589
C G GG G G G G G G G GG GGGGG G
Sbjct: 122 CGGGGGGCGGGCGGGGGGGCG----GGGGGGCGGGGGGCGGGGGGCGGGGGGCG 171
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = -1
Query: 771 GGRGAXXCEGXGGSXEGXAXXAVGXRXGXXFVAGXXXXPGXXXGXXGXGGXXVPGGGGGX 592
G G C G GG G G A P G G GG G GGG
Sbjct: 78 GCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGG 137
Query: 591 G 589
G
Sbjct: 138 G 138
Score = 28.3 bits (60), Expect = 7.4
Identities = 28/93 (30%), Positives = 29/93 (31%), Gaps = 4/93 (4%)
Frame = -1
Query: 771 GGRGAXXCEGXGGSXEGXAXX----AVGXRXGXXFVAGXXXXPGXXXGXXGXGGXXVPGG 604
G G C G GG G A A G G G G G G GG G
Sbjct: 35 GCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGG-GGCGGGGGGCGGGGGCGGGGGGCG 93
Query: 603 GGGXGRXXXXXLXRGXAAXX*DPSXXXXXFGGG 505
GGG G G A P+ GGG
Sbjct: 94 GGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGG 126
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 33.5 bits (73), Expect = 0.20
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -3
Query: 679 CGGXXGXPGXGXGXXGGGRGXCXGXWG 599
CGG G G G G GGG G C G G
Sbjct: 95 CGGGGGGCGGGGGCGGGGGGGCGGGGG 121
Score = 32.3 bits (70), Expect = 0.45
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = -1
Query: 771 GGRGAXXCEGXGGSXEGXAXXAVGXRXGXXFVAGXXXXPGXXXGXXGXGGXXVPGGGGG 595
GG G C G GG G G G G G G G GG GG GG
Sbjct: 88 GGCGGGGCGGGGGGCGGGGGCGGGGGGG----CGGGGGGGCGGGGGGGGGGYASGGSGG 142
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -3
Query: 679 CGGXXG-XPGXGXGXXGGGRGXCXGXWGXXG 590
CGG G G G G GGG G C G G G
Sbjct: 102 CGGGGGCGGGGGGGCGGGGGGGCGGGGGGGG 132
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 664 GXPGXGXGXXGGGRGXCXGXWGXXG 590
G G G G GGG G C G G G
Sbjct: 86 GGGGCGGGGCGGGGGGCGGGGGCGG 110
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.5 bits (73), Expect = 0.20
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +3
Query: 525 LXGXGLXXXPPXHGSXPXXXTXPXXPHXPXHXPRPPPXXPXPXPGXPXFPP 677
L G G PP GS P T P P P PPP P P PP
Sbjct: 249 LAGSGSPPPPPAAGSPPPPRTGSPPP-PPTGSPPPPPAGGSPPPPRAGSPP 298
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.5 bits (73), Expect = 0.20
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +3
Query: 525 LXGXGLXXXPPXHGSXPXXXTXPXXPHXPXHXPRPPPXXPXPXPGXPXFPP 677
L G G PP GS P T P P P PPP P P PP
Sbjct: 270 LAGSGSPPPPPAAGSPPPPRTGSPPP-PPTGSPPPPPAGGSPPPPRAGSPP 319
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.5 bits (73), Expect = 0.20
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +3
Query: 525 LXGXGLXXXPPXHGSXPXXXTXPXXPHXPXHXPRPPPXXPXPXPGXPXFPP 677
L G G PP GS P T P P P PPP P P PP
Sbjct: 255 LAGSGSPPPPPAAGSPPPPRTGSPPP-PPTGSPPPPPAGGSPPPPRAGSPP 304
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.1 bits (72), Expect = 0.26
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = +2
Query: 590 PXPPPPP--GTXXPPXPXXPXSXPGXXXXPATKXXP 691
P PPPPP G PP P P PG P P
Sbjct: 285 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 320
Score = 31.9 bits (69), Expect = 0.60
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +3
Query: 552 PPXHGSXPXXXTXPXXPHXPXHXPRPPPXXPXPXPGXPXFPP 677
PP G P P P P PP P P PG P PP
Sbjct: 278 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGP-PGMPGMPP 318
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +3
Query: 552 PPXHGSXPXXXTXPXXPHXPXHXPRPPPXXPXPXPGXPXFP 674
PP P P P P PPP P PG P P
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMP 314
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/36 (36%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = +2
Query: 590 PXPPPPPGTXX--PPXPXXPXSXPGXXXXPATKXXP 691
P PPPPP PP P P P P++ P
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWP 297
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/38 (36%), Positives = 15/38 (39%), Gaps = 4/38 (10%)
Frame = +2
Query: 590 PXPPP----PPGTXXPPXPXXPXSXPGXXXXPATKXXP 691
P PPP P G PP P P + PG P P
Sbjct: 335 PPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPP 372
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.1 bits (72), Expect = 0.26
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = +2
Query: 590 PXPPPPP--GTXXPPXPXXPXSXPGXXXXPATKXXP 691
P PPPPP G PP P P PG P P
Sbjct: 295 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 330
Score = 31.9 bits (69), Expect = 0.60
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +3
Query: 552 PPXHGSXPXXXTXPXXPHXPXHXPRPPPXXPXPXPGXPXFPP 677
PP G P P P P PP P P PG P PP
Sbjct: 288 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGP-PGMPGMPP 328
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +3
Query: 552 PPXHGSXPXXXTXPXXPHXPXHXPRPPPXXPXPXPGXPXFP 674
PP P P P P PPP P PG P P
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMP 324
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/36 (36%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = +2
Query: 590 PXPPPPPGTXX--PPXPXXPXSXPGXXXXPATKXXP 691
P PPPPP PP P P P P++ P
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWP 307
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/38 (36%), Positives = 15/38 (39%), Gaps = 4/38 (10%)
Frame = +2
Query: 590 PXPPP----PPGTXXPPXPXXPXSXPGXXXXPATKXXP 691
P PPP P G PP P P + PG P P
Sbjct: 345 PPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPP 382
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 32.7 bits (71), Expect = 0.34
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 596 PPPPPGTXXPPXPXXPXSXPGXXXXPATKXXP 691
PP PPG PP P P PG P P
Sbjct: 223 PPGPPGPPGPPGPQGPPGPPGKDGQPGKAGPP 254
Score = 31.9 bits (69), Expect = 0.60
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 590 PXPPPPPGTXXPPXPXXPXSXPGXXXXPATKXXP 691
P PP PPG PP P PG P P
Sbjct: 227 PGPPGPPGPQGPPGPPGKDGQPGKAGPPGLPGDP 260
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = +2
Query: 587 LPXPPP-PPGTXXPPXPXXPXSXPGXXXXP 673
LP PPP PP PP P P PG P
Sbjct: 144 LPGPPPKPPCQKCPPGPPGPAGPPGPKGLP 173
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.34
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +2
Query: 590 PXPPPPPGTXXPPXPXXPXSXPGXXXXPATKXXPNRFPTAXXAXP 724
P PPPPPG PP P P G P P F P
Sbjct: 759 PPPPPPPGGCPPPPPPPPPG--GFKGGPPPPPPPGMFAPMAPVIP 801
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 4/47 (8%)
Frame = +2
Query: 596 PPPPPG----TXXPPXPXXPXSXPGXXXXPATKXXPNRFPTAXXAXP 724
PPPPPG T PP P P P P P P P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 759
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Frame = +2
Query: 590 PXPPPPPGTXXP--PXPXXPXSXPGXXXXPATKXXPNRF 700
P PPPPPG P P P PG P P F
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 780
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 5/39 (12%)
Frame = +2
Query: 590 PXPPPPPG-----TXXPPXPXXPXSXPGXXXXPATKXXP 691
P PPPPPG T PP P P P P P
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +3
Query: 552 PPXHGSXPXXXTXPXXPHXPXHXPRPPPXXPXPXPGXPXFPP 677
PP G P P P P P PPP P P G PP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPP--PPPPGGFKGGPP 785
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +2
Query: 590 PXPPPPPGTXXPPXPXXPXSXPGXXXXPATKXXPNRFP 703
P PPPPPG P P P P P +FP
Sbjct: 784 PPPPPPPGMFAPMAPVIPDYLP-PKKVPKVDGPMRKFP 820
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Frame = +3
Query: 552 PPXHGSXPXXXTXPXXPHXPXHXPRPPPXXPXP--XPGXPXFPP 677
PP G P P P P PPP P P G P PP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 3/45 (6%)
Frame = +3
Query: 552 PPXHGSXPXXXTXPXXPHXPXHXP---RPPPXXPXPXPGXPXFPP 677
PP G P P P P P PP P P G P PP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.34
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +2
Query: 590 PXPPPPPGTXXPPXPXXPXSXPGXXXXPATKXXPNRFPTAXXAXP 724
P PPPPPG PP P P G P P F P
Sbjct: 759 PPPPPPPGGCPPPPPPPPPG--GFKGGPPPPPPPGMFAPMAPVIP 801
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 4/47 (8%)
Frame = +2
Query: 596 PPPPPG----TXXPPXPXXPXSXPGXXXXPATKXXPNRFPTAXXAXP 724
PPPPPG T PP P P P P P P P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 759
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Frame = +2
Query: 590 PXPPPPPGTXXP--PXPXXPXSXPGXXXXPATKXXPNRF 700
P PPPPPG P P P PG P P F
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 780
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 5/39 (12%)
Frame = +2
Query: 590 PXPPPPPG-----TXXPPXPXXPXSXPGXXXXPATKXXP 691
P PPPPPG T PP P P P P P
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +3
Query: 552 PPXHGSXPXXXTXPXXPHXPXHXPRPPPXXPXPXPGXPXFPP 677
PP G P P P P P PPP P P G PP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPP--PPPPGGFKGGPP 785
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +2
Query: 590 PXPPPPPGTXXPPXPXXPXSXPGXXXXPATKXXPNRFP 703
P PPPPPG P P P P P +FP
Sbjct: 784 PPPPPPPGMFAPMAPVIPDYLP-PKKVPKVDGPMRKFP 820
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Frame = +3
Query: 552 PPXHGSXPXXXTXPXXPHXPXHXPRPPPXXPXP--XPGXPXFPP 677
PP G P P P P PPP P P G P PP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 3/45 (6%)
Frame = +3
Query: 552 PPXHGSXPXXXTXPXXPHXPXHXP---RPPPXXPXPXPGXPXFPP 677
PP G P P P P P PP P P G P PP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.34
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +2
Query: 590 PXPPPPPGTXXPPXPXXPXSXPGXXXXPATKXXPNRFPTAXXAXP 724
P PPPPPG PP P P G P P F P
Sbjct: 342 PPPPPPPGGCPPPPPPPPPG--GFKGGPPPPPPPGMFAPMAPVIP 384
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 4/47 (8%)
Frame = +2
Query: 596 PPPPPG----TXXPPXPXXPXSXPGXXXXPATKXXPNRFPTAXXAXP 724
PPPPPG T PP P P P P P P P
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 342
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Frame = +2
Query: 590 PXPPPPPGTXXP--PXPXXPXSXPGXXXXPATKXXPNRF 700
P PPPPPG P P P PG P P F
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 363
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 5/39 (12%)
Frame = +2
Query: 590 PXPPPPPG-----TXXPPXPXXPXSXPGXXXXPATKXXP 691
P PPPPPG T PP P P P P P
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 347
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +3
Query: 552 PPXHGSXPXXXTXPXXPHXPXHXPRPPPXXPXPXPGXPXFPP 677
PP G P P P P P PPP P P G PP
Sbjct: 329 PPPGGLPPISGGPPPPPPPPGGCPPPPP--PPPPGGFKGGPP 368
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +2
Query: 590 PXPPPPPGTXXPPXPXXPXSXPGXXXXPATKXXPNRFP 703
P PPPPPG P P P P P +FP
Sbjct: 367 PPPPPPPGMFAPMAPVIPDYLP-PKKVPKVDGPMRKFP 403
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Frame = +3
Query: 552 PPXHGSXPXXXTXPXXPHXPXHXPRPPPXXPXP--XPGXPXFPP 677
PP G P P P P PPP P P G P PP
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 3/45 (6%)
Frame = +3
Query: 552 PPXHGSXPXXXTXPXXPHXPXHXP---RPPPXXPXPXPGXPXFPP 677
PP G P P P P P PP P P G P PP
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 31.9 bits (69), Expect = 0.60
Identities = 27/96 (28%), Positives = 31/96 (32%)
Frame = -1
Query: 771 GGRGAXXCEGXGGSXEGXAXXAVGXRXGXXFVAGXXXXPGXXXGXXGXGGXXVPGGGGGX 592
GG G G G G G G + G PG G G GG GGGG
Sbjct: 107 GGMGGGGYGGGGYGGGGDGGGGYGGYGGGGY-GGMGGGPGGY-GMGGYGGGG--GGGGDF 162
Query: 591 GRXXXXXLXRGXAAXX*DPSXXXXXFGGGSIA*FXG 484
G + G D FGGG + + G
Sbjct: 163 GGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGG 198
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 31.5 bits (68), Expect = 0.79
Identities = 18/41 (43%), Positives = 18/41 (43%)
Frame = -3
Query: 676 GGXXGXPGXGXGXXGGGRGXCXGXWGXXGXVXXXGFXPWXG 554
GG G G G G GGGRG G WG G G W G
Sbjct: 238 GGRGGQQGPG-GWGGGGRGGGWGGWG-RGSRWGWGRPSWGG 276
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = -3
Query: 676 GGXXGXPGXGXGXXGGGR-GXCXGXWGXXGXVXXXGFXPWXGG 551
GG G G G G GGGR G G G G G GG
Sbjct: 50 GGTGGGRGGGRGGSGGGRGGGSGGGRGGSGGAGAGGSGSGSGG 92
Score = 28.7 bits (61), Expect = 5.6
Identities = 27/86 (31%), Positives = 28/86 (32%)
Frame = -3
Query: 847 GGGTXGXXXG*VXXGXXXXGXRXXXWXERGVXV*GXGRVXGRGXXXRXGKXIXXXFCGGX 668
GGG G G G G W G G G G G R G GG
Sbjct: 157 GGGGRGGSGGQGGWGGSQDGGSQGGWG--GQNGGGQGGNQG-GGGGRGGNQ------GGE 207
Query: 667 XGXPGXGXGXXGGGRGXCXGXWGXXG 590
G G G GG +G G WG G
Sbjct: 208 QGGWGGQGGSQGGSQGGSQGGWGNQG 233
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 31.5 bits (68), Expect = 0.79
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = +2
Query: 560 PRXKXXXXXLPXPPPPPGTXXPPXPXXPXSXPGXXXXPATKXXPNRFP 703
PR P PPPPP P P P P+ + P R P
Sbjct: 128 PRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTP 175
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.5 bits (68), Expect = 0.79
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 590 PXPPPPPGTXXPPXPXXPXSXPGXXXXPA 676
P PPPPP PP P P P PA
Sbjct: 65 PPPPPPPPMCPPPPPPMPSYSPCQSYAPA 93
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/62 (29%), Positives = 20/62 (32%), Gaps = 3/62 (4%)
Frame = +3
Query: 552 PPXHGSXPXXXTXPXXPHXPXHXPRPPPXXPXPXPGXP---XFPPQNXLXIXFPXRXXXP 722
PP P P P P PPP P P P P PP + P + P
Sbjct: 33 PPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSPCQSYAP 92
Query: 723 LP 728
P
Sbjct: 93 AP 94
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 590 PXPPPPPGTXXPPXPXXPXSXPGXXXXP 673
P PP PG PP P P PG P
Sbjct: 232 PGPPGAPGNDGPPGPPGPKGAPGPDGPP 259
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 590 PXPPPPPGTXXPPXPXXPXSXPGXXXXP 673
P PP PG PP P P PG P
Sbjct: 227 PGPPGAPGNDGPPGPPGPKGAPGPDGPP 254
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 590 PXPPPPPGTXXPPXPXXPXSXPGXXXXP 673
P PP PG PP P P PG P
Sbjct: 227 PGPPGAPGNDGPPGPPGPKGAPGPDGPP 254
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +2
Query: 590 PXPPPPPGTXXPPXPXXPXSXPGXXXXPAT 679
P PPPPP PP P P PG PA+
Sbjct: 578 PPPPPPPMLGGPPPPPPP---PGGLMGPAS 604
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +2
Query: 596 PPPPPGTXXPPXPXXPXSXPGXXXXPATKXXPNR 697
P PG PP P P PG P T P +
Sbjct: 244 PTAAPGAAGPPGPPGPAGAPGPDGNPGTAGPPGK 277
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 590 PXPPPPPGTXXPPXPXXPXSXPGXXXXP 673
P P PPG PP P P G P
Sbjct: 181 PAAPSPPGPPGPPGPAGPAGNDGAAGTP 208
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +2
Query: 596 PPPPPGTXXPPXPXXPXSXPGXXXXPATKXXPNR 697
P PG PP P P PG P T P +
Sbjct: 243 PTAAPGAAGPPGPPGPAGAPGPDGNPGTAGPPGK 276
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/46 (30%), Positives = 16/46 (34%)
Frame = +2
Query: 590 PXPPPPPGTXXPPXPXXPXSXPGXXXXPATKXXPNRFPTAXXAXPS 727
P P PPG P P P G PA P + A P+
Sbjct: 153 PCPAGPPGPPGPDGPAGPAGPDGEAGSPAAPSPPGPPGPSGPAGPA 198
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 591 PXXPHXPXHXPRPPPXXPXPXP 656
P P P H P PPP P P P
Sbjct: 132 PPPPPPPPHYPPPPPHYPPPPP 153
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/48 (29%), Positives = 18/48 (37%)
Frame = +2
Query: 590 PXPPPPPGTXXPPXPXXPXSXPGXXXXPATKXXPNRFPTAXXAXPSXD 733
P PPPPP P P P P+ + +F T P+ D
Sbjct: 156 PPPPPPPPVSVPSSKPTPPPPPPAQQKPSFQSDREQFRTMRPLRPAND 203
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 587 LPXPPPPPGTXXPPXPXXPXSXP 655
+P PPPPP PP P + P
Sbjct: 1 MPPPPPPPPPPPPPPPPAASAPP 23
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +3
Query: 531 GXGLXXXPPXHGSXPXXXTXPXXPHXPXHXPRPPPXXPXPXPGXPXFPP 677
G + PP HG P P H PPP P P PP
Sbjct: 1553 GPPMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPP 1601
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 590 PXPPPPPGTXXPPXPXXPXSXPGXXXXPATKXXP 691
P PPPPP P P P P P P
Sbjct: 1342 PPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLP 1375
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 590 PXPPPPPGTXXPPXPXXPXSXPG 658
P PP PG PP P P PG
Sbjct: 234 PGPPGAPGNDGPPGPPGPKGSPG 256
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -3
Query: 664 GXPGXGXGXXGGGRGXCXGXWGXXGXVXXXGFXPWXGGXXXR 539
G G G G GGG G WG G W GG R
Sbjct: 213 GGSGGGGGGGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGGGR 254
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -3
Query: 676 GGXXGXPGXGXGXXGGGRGXCXGXWGXXGXVXXXGFXPWXGG 551
GG G G G GGGR G WG G G GG
Sbjct: 223 GGGGYGSGGGWGGGGGGRDRDRGGWGGGGGGRGYGGGGGGGG 264
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +3
Query: 552 PPXHGSXPXXXTXPXXPHXPXHXPRPPPXXPXPXPGXPXFPPQN 683
PP P T P P + P PPP P P P +P N
Sbjct: 27 PPCPEPMPVCATPPCPPQ---YAPLPPPPMPAPAPAYNPYPCAN 67
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 590 PXPPPPPGTXXPPXPXXPXSXPG 658
P PP PG PP P P PG
Sbjct: 234 PGPPGAPGNDGPPGPPGPKGSPG 256
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Frame = +2
Query: 599 PPPPGTXXP-PXPXXPXSXPGXXXXPATKXXP-NRFPTAXXAXP 724
PP GT P P P + PG PAT+ P R P A P
Sbjct: 285 PPSSGTSAPQPPPRGSTAAPGTRAPPATRAPPATRAPPATTRAP 328
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = +3
Query: 537 GLXXXPPXHGSXPXXXTXPXXPHXPXHXPRPPPXXPXPXPGXPXFPPQN 683
G P G+ P P H P PP P PG P FP Q+
Sbjct: 347 GFGPQRPRPGTRPRGNPCDQCSAQPNHCPSGPPG-PRGRPGPPGFPGQD 394
>Z30215-9|CAB54247.1| 1037|Caenorhabditis elegans Hypothetical
protein ZK757.3b protein.
Length = 1037
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 673 GXXGXPGXGXGXXGGGRGXCXGXWGXXG 590
G G PG G GGGRG G +G G
Sbjct: 332 GGPGGPGGYRGGRGGGRGGSYGNFGNRG 359
>Z30215-8|CAA82941.1| 1040|Caenorhabditis elegans Hypothetical
protein ZK757.3a protein.
Length = 1040
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 673 GXXGXPGXGXGXXGGGRGXCXGXWGXXG 590
G G PG G GGGRG G +G G
Sbjct: 335 GGPGGPGGYRGGRGGGRGGSYGNFGNRG 362
>Z29121-4|CAB54514.1| 1037|Caenorhabditis elegans Hypothetical
protein ZK757.3b protein.
Length = 1037
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 673 GXXGXPGXGXGXXGGGRGXCXGXWGXXG 590
G G PG G GGGRG G +G G
Sbjct: 332 GGPGGPGGYRGGRGGGRGGSYGNFGNRG 359
>Z29121-3|CAA82389.1| 1040|Caenorhabditis elegans Hypothetical
protein ZK757.3a protein.
Length = 1040
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 673 GXXGXPGXGXGXXGGGRGXCXGXWGXXG 590
G G PG G GGGRG G +G G
Sbjct: 335 GGPGGPGGYRGGRGGGRGGSYGNFGNRG 362
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/63 (33%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = -1
Query: 771 GGRGAXXCEGXGGSXEGXAXXAVGXRXGXXFVAGXXXXPGXXXGXXGXGGXXVPG-GGGG 595
GGRG GG G G G G G G GG G GGGG
Sbjct: 66 GGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGG 125
Query: 594 XGR 586
GR
Sbjct: 126 GGR 128
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 673 GXXGXPGXGXGXXGGGRGXCXGXWG 599
G G PG G G G GRG WG
Sbjct: 41 GGWGRPGWGGGGPGWGRGGGGSGWG 65
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 590 PXPPPPPGTXXPPXPXXPXSXPG 658
P P PPG PP P P PG
Sbjct: 164 PGPAGPPGGPGPPGPPGPEGAPG 186
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 29.1 bits (62), Expect = 4.2
Identities = 21/59 (35%), Positives = 21/59 (35%)
Frame = -1
Query: 765 RGAXXCEGXGGSXEGXAXXAVGXRXGXXFVAGXXXXPGXXXGXXGXGGXXVPGGGGGXG 589
RG G GG G AVG G G G G G G V GG GG G
Sbjct: 69 RGYAQYGGGGGYGGGHGGAAVGGGYGG--AVGGGGGGGYGGGHGGGHGGAVGGGYGGGG 125
>AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.2 protein.
Length = 381
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +3
Query: 600 PHXPX-HXPRPPPXXPXPXPGXPXFPPQ 680
PH + P+PPP P P PG P PP+
Sbjct: 174 PHCECENCPKPPPPPPIPPPGPP--PPR 199
>AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.3 protein.
Length = 381
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +3
Query: 600 PHXPX-HXPRPPPXXPXPXPGXPXFPPQ 680
PH + P+PPP P P PG P PP+
Sbjct: 174 PHCECENCPKPPPPPPIPPPGPP--PPR 199
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 596 PPPPPGTXXPPXPXXPXSXPGXXXXPATKXXP 691
PP PPG PP PG P T P
Sbjct: 207 PPGPPGPPGPPGKDGEAGAPGAPGGPGTDGAP 238
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +2
Query: 596 PPPPPGTXXPPXPXXPXSXPGXXXXPA 676
PP P G PP P P PG P+
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPS 180
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +2
Query: 596 PPPPPGTXXPPXPXXPXSXPGXXXXPA 676
PP P G PP P P PG P+
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPS 180
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 590 PXPPPPPGTXXPPXPXXPXSXPGXXXXPATKXXP 691
P P PPG PP P PG P P
Sbjct: 147 PCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAP 180
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/38 (34%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Frame = +2
Query: 590 PXPPPP--PGTXXPPXPXXPXSXPGXXXXPATKXXPNR 697
P PPP P PP P P PG P + P +
Sbjct: 139 PITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQ 176
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = +2
Query: 596 PPPPPGTXXPPXPXXPXSXPGXXXXPATKXXPNRFPTAXXAXPS 727
PP P + PP P P PG P P+ P PS
Sbjct: 61 PPAPRPSGQPPGPQGPSDLPGPSGAPPGPPHPSGPPHRPHPHPS 104
>U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-like
protein protein32 protein.
Length = 105
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 676 GGXXGXPGXGXGXXGGGRGXCXGXWGXXG 590
GG G G G GGG G G WG G
Sbjct: 62 GGWGRGGGRGYGGRGGGWGGRGGGWGRGG 90
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 587 LPXPPPPPGTXXPPXPXXPXSXP 655
+P PPPPP PP P + P
Sbjct: 1 MPPPPPPPPPPPPPPPPAASAPP 23
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 590 PXPPPPPGTXXPPXPXXPXSXPGXXXXPATKXXP 691
P P PPG PP P PG P P
Sbjct: 147 PCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAP 180
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/38 (34%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Frame = +2
Query: 590 PXPPPP--PGTXXPPXPXXPXSXPGXXXXPATKXXPNR 697
P PPP P PP P P PG P + P +
Sbjct: 139 PITPPPWKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQ 176
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +2
Query: 596 PPPPPGTXXPPXPXXPXSXPGXXXXPA 676
PP P G PP P P PG P+
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPS 180
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +2
Query: 596 PPPPPGTXXPPXPXXPXSXPGXXXXPA 676
PP P G PP P P PG P+
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPS 180
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 590 PXPPPPPGTXXPPXPXXPXSXPGXXXXPATKXXP 691
P P PPG PP P PG P P
Sbjct: 147 PCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAP 180
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/38 (34%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Frame = +2
Query: 590 PXPPPP--PGTXXPPXPXXPXSXPGXXXXPATKXXPNR 697
P PPP P PP P P PG P + P +
Sbjct: 139 PITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQ 176
>AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen
protein 116 protein.
Length = 313
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 587 LPXPPPPPGTXXPPXPXXPXSXPG 658
LP P PG+ PP P P PG
Sbjct: 179 LPGDGPTPGSPGPPGPPGPPGYPG 202
>X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein.
Length = 318
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 596 PPPPPGTXXPPXPXXPXSXPGXXXXP 673
PP PPG P P P PG P
Sbjct: 250 PPGPPGPRGEPGPPGPFGPPGDSGEP 275
>U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 7 protein.
Length = 318
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 596 PPPPPGTXXPPXPXXPXSXPGXXXXP 673
PP PPG P P P PG P
Sbjct: 250 PPGPPGPRGEPGPPGPFGPPGDSGEP 275
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 590 PXPPPPPGTXXPPXPXXP 643
P PPPPP PP P P
Sbjct: 72 PPPPPPPMPCPPPPPPMP 89
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 590 PXPPPPPGTXXPPXPXXP 643
P PPPPP PP P P
Sbjct: 756 PPPPPPPLAAAPPQPKNP 773
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 676 GGXXGXPGXGXGXXGGGRGXCXGXWGXXGXVXXXGF 569
GG G G G G GGRG G G G GF
Sbjct: 150 GGGRGRGGRGRGGDRGGRGSDRGGRGGFGRGGGGGF 185
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 587 LPXPPPPPGTXXPPXPXXPXSXPGXXXXP 673
LP PP PPG PP PG P
Sbjct: 217 LPGPPGPPGPQGPPGADGLPGNPGAPGVP 245
>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
protein K02E2.2 protein.
Length = 1021
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 587 LPXPPPPPGTXXPPXP 634
LP PPPPP PP P
Sbjct: 783 LPVPPPPPVPPPPPPP 798
>Z81048-9|CAI79126.1| 560|Caenorhabditis elegans Hypothetical
protein C41G7.5b protein.
Length = 560
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = +3
Query: 591 PXXPHXPXHXPRPPPXXPXPXPGXPXFPPQNXLXIXFP 704
P PH H + PP P P PG +P + +P
Sbjct: 457 PAWPHDVYHLTQYPPTYPHP-PGTVGYPDVQIAPVDYP 493
>Z81048-8|CAB51463.1| 602|Caenorhabditis elegans Hypothetical
protein C41G7.5a protein.
Length = 602
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = +3
Query: 591 PXXPHXPXHXPRPPPXXPXPXPGXPXFPPQNXLXIXFP 704
P PH H + PP P P PG +P + +P
Sbjct: 499 PAWPHDVYHLTQYPPTYPHP-PGTVGYPDVQIAPVDYP 535
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/40 (35%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Frame = +2
Query: 596 PPPPPGTXXPPXPXXPXSXPGXXXXP---ATKXXPNRFPT 706
PPPPP PP P P P AT P+ P+
Sbjct: 134 PPPPPSPPPPPPPPPPQLQQQQVQLPLQDATTLRPSTLPS 173
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +2
Query: 590 PXPPPPPGTXXPPXPXXPXSXPGXXXXPATKXXP 691
P PP PP P P P P P T+ P
Sbjct: 247 PGPPGPPTRRPPGPPGPPTRRPPGPPGPPTRRPP 280
>U27312-10|AAA68253.1| 231|Caenorhabditis elegans Hypothetical
protein F26A1.12 protein.
Length = 231
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 600 PHXPXHXPRPPPXXPXPXPGXPXFP 674
P P PRPPP P P P P
Sbjct: 50 PPRPNRPPRPPPATPPPTTPAPSCP 74
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
Frame = +3
Query: 555 PXHGSXPXXXTXPXXPHXPXHXPRPPPXXPXP--XPGXPXFP-PQ 680
P G P P P P H PPP P P PG P P PQ
Sbjct: 130 PGAGGLPGNPGRP--PAQPCHPITPPPCRPCPQGPPGAPGSPGPQ 172
>AF039570-1|AAC00000.1| 602|Caenorhabditis elegans aryl hydrocarbon
receptor orthologAHR-1 protein.
Length = 602
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = +3
Query: 591 PXXPHXPXHXPRPPPXXPXPXPGXPXFPPQNXLXIXFP 704
P PH H + PP P P PG +P + +P
Sbjct: 499 PAWPHDVYHLTQYPPTYPHP-PGTVGYPDVQIAPVDYP 535
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,740,293
Number of Sequences: 27780
Number of extensions: 176250
Number of successful extensions: 3429
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 1085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2590
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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