Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_B14
(820 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein. 32 2.9
BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein. 32 2.9
AF093747-1|AAD29861.1| 115|Homo sapiens KH type splicing regula... 32 2.9
BC108290-1|AAI08291.1| 316|Homo sapiens LOR protein protein. 26 4.0
BC034690-1|AAH34690.1| 316|Homo sapiens LOR protein protein. 26 4.0
X72727-1|CAA51267.1| 464|Homo sapiens transformation upregulate... 31 5.0
S74678-1|AAB20770.1| 463|Homo sapiens heterogeneous nuclear rib... 31 5.0
CR456771-1|CAG33052.1| 464|Homo sapiens HNRPK protein. 31 5.0
BC014980-1|AAH14980.1| 463|Homo sapiens heterogeneous nuclear r... 31 5.0
BC000355-1|AAH00355.1| 464|Homo sapiens heterogeneous nuclear r... 31 5.0
AY911506-1|AAW84289.1| 464|Homo sapiens heterogeneous nuclear r... 31 5.0
AL354733-12|CAI16022.1| 379|Homo sapiens heterogeneous nuclear ... 31 5.0
AL354733-11|CAI16021.1| 464|Homo sapiens heterogeneous nuclear ... 31 5.0
AL354733-10|CAI16020.1| 463|Homo sapiens heterogeneous nuclear ... 31 5.0
AL354733-9|CAI16019.1| 428|Homo sapiens heterogeneous nuclear r... 31 5.0
AL354733-8|CAI16018.1| 306|Homo sapiens heterogeneous nuclear r... 31 5.0
AB209562-1|BAD92799.1| 442|Homo sapiens heterogeneous nuclear r... 31 5.0
AB002337-1|BAA20797.2| 1709|Homo sapiens KIAA0339 protein protein. 31 5.0
AY014304-1|AAG42152.1| 290|Homo sapiens HOXD8 protein. 25 8.8
BC090853-1|AAH90853.1| 289|Homo sapiens HOXD8 protein protein. 25 8.8
BC038709-1|AAH38709.1| 289|Homo sapiens homeobox D8 protein. 25 8.8
>U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein.
Length = 711
Score = 31.9 bits (69), Expect = 2.9
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 637 PPPXPPPXXGGGGG 678
PPP PPP GGGGG
Sbjct: 9 PPPGPPPPAGGGGG 22
>BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein.
Length = 710
Score = 31.9 bits (69), Expect = 2.9
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 637 PPPXPPPXXGGGGG 678
PPP PPP GGGGG
Sbjct: 9 PPPGPPPPAGGGGG 22
>AF093747-1|AAD29861.1| 115|Homo sapiens KH type splicing
regulatory protein protein.
Length = 115
Score = 31.9 bits (69), Expect = 2.9
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 637 PPPXPPPXXGGGGG 678
PPP PPP GGGGG
Sbjct: 9 PPPGPPPPAGGGGG 22
>BC108290-1|AAI08291.1| 316|Homo sapiens LOR protein protein.
Length = 316
Score = 26.2 bits (55), Expect(2) = 4.0
Identities = 19/63 (30%), Positives = 21/63 (33%), Gaps = 2/63 (3%)
Frame = -1
Query: 655 GGGGGGGXXFFXXXXXXXPRXGXGXXXXXXXXKN--XFXXKXXGGGGGXRPPXFXXXGGG 482
GGGGGGG FF G G + GGGGG GG
Sbjct: 27 GGGGGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGCGGGSSGGGGGGGIGGCGGGSGG 86
Query: 481 TXK 473
+ K
Sbjct: 87 SVK 89
Score = 23.8 bits (49), Expect(2) = 4.0
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -1
Query: 703 KKKKXXXXPPPPPXXXGGGGGGG 635
+KK+ PP GGGGGG
Sbjct: 4 QKKQPTPQPPVDCVKTSGGGGGG 26
>BC034690-1|AAH34690.1| 316|Homo sapiens LOR protein protein.
Length = 316
Score = 26.2 bits (55), Expect(2) = 4.0
Identities = 19/63 (30%), Positives = 21/63 (33%), Gaps = 2/63 (3%)
Frame = -1
Query: 655 GGGGGGGXXFFXXXXXXXPRXGXGXXXXXXXXKN--XFXXKXXGGGGGXRPPXFXXXGGG 482
GGGGGGG FF G G + GGGGG GG
Sbjct: 27 GGGGGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGCGGGSSGGGGGGGIGGCGGGSGG 86
Query: 481 TXK 473
+ K
Sbjct: 87 SVK 89
Score = 23.8 bits (49), Expect(2) = 4.0
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -1
Query: 703 KKKKXXXXPPPPPXXXGGGGGGG 635
+KK+ PP GGGGGG
Sbjct: 4 QKKQPTPQPPVDCVKTSGGGGGG 26
>X72727-1|CAA51267.1| 464|Homo sapiens transformation upregulated
nuclear protein protein.
Length = 464
Score = 31.1 bits (67), Expect = 5.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 678 PPPPPXXXGGXGGGGXFFFXFXXXPPPXXG 589
PPPPP GG GG PPP G
Sbjct: 289 PPPPPPGRGGRGGSRARNLPLPPPPPPRGG 318
>S74678-1|AAB20770.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein complex K protein.
Length = 463
Score = 31.1 bits (67), Expect = 5.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 678 PPPPPXXXGGXGGGGXFFFXFXXXPPPXXG 589
PPPPP GG GG PPP G
Sbjct: 289 PPPPPPGRGGRGGSRARNLPLPPPPPPRGG 318
>CR456771-1|CAG33052.1| 464|Homo sapiens HNRPK protein.
Length = 464
Score = 31.1 bits (67), Expect = 5.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 678 PPPPPXXXGGXGGGGXFFFXFXXXPPPXXG 589
PPPPP GG GG PPP G
Sbjct: 289 PPPPPPGRGGRGGSRARNLPLPPPPPPRGG 318
>BC014980-1|AAH14980.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 463
Score = 31.1 bits (67), Expect = 5.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 678 PPPPPXXXGGXGGGGXFFFXFXXXPPPXXG 589
PPPPP GG GG PPP G
Sbjct: 289 PPPPPPGRGGRGGSRARNLPLPPPPPPRGG 318
>BC000355-1|AAH00355.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 464
Score = 31.1 bits (67), Expect = 5.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 678 PPPPPXXXGGXGGGGXFFFXFXXXPPPXXG 589
PPPPP GG GG PPP G
Sbjct: 289 PPPPPPGRGGRGGSRARNLPLPPPPPPRGG 318
>AY911506-1|AAW84289.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K transcript variant protein.
Length = 464
Score = 31.1 bits (67), Expect = 5.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 678 PPPPPXXXGGXGGGGXFFFXFXXXPPPXXG 589
PPPPP GG GG PPP G
Sbjct: 289 PPPPPPGRGGRGGSRARNLPLPPPPPPRGG 318
>AL354733-12|CAI16022.1| 379|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 379
Score = 31.1 bits (67), Expect = 5.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 678 PPPPPXXXGGXGGGGXFFFXFXXXPPPXXG 589
PPPPP GG GG PPP G
Sbjct: 265 PPPPPPGRGGRGGSRARNLPLPPPPPPRGG 294
>AL354733-11|CAI16021.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 464
Score = 31.1 bits (67), Expect = 5.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 678 PPPPPXXXGGXGGGGXFFFXFXXXPPPXXG 589
PPPPP GG GG PPP G
Sbjct: 289 PPPPPPGRGGRGGSRARNLPLPPPPPPRGG 318
>AL354733-10|CAI16020.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 463
Score = 31.1 bits (67), Expect = 5.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 678 PPPPPXXXGGXGGGGXFFFXFXXXPPPXXG 589
PPPPP GG GG PPP G
Sbjct: 289 PPPPPPGRGGRGGSRARNLPLPPPPPPRGG 318
>AL354733-9|CAI16019.1| 428|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 428
Score = 31.1 bits (67), Expect = 5.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 678 PPPPPXXXGGXGGGGXFFFXFXXXPPPXXG 589
PPPPP GG GG PPP G
Sbjct: 254 PPPPPPGRGGRGGSRARNLPLPPPPPPRGG 283
>AL354733-8|CAI16018.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 306
Score = 31.1 bits (67), Expect = 5.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 678 PPPPPXXXGGXGGGGXFFFXFXXXPPPXXG 589
PPPPP GG GG PPP G
Sbjct: 220 PPPPPPGRGGRGGSRARNLPLPPPPPPRGG 249
>AB209562-1|BAD92799.1| 442|Homo sapiens heterogeneous nuclear
ribonucleoprotein K isoform a variant protein.
Length = 442
Score = 31.1 bits (67), Expect = 5.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 678 PPPPPXXXGGXGGGGXFFFXFXXXPPPXXG 589
PPPPP GG GG PPP G
Sbjct: 267 PPPPPPGRGGRGGSRARNLPLPPPPPPRGG 296
>AB002337-1|BAA20797.2| 1709|Homo sapiens KIAA0339 protein protein.
Length = 1709
Score = 31.1 bits (67), Expect = 5.0
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 637 PPPXPPPXXGGGGGG 681
PPP PP GGGGGG
Sbjct: 435 PPPEPPEPGGGGGGG 449
Score = 30.7 bits (66), Expect = 6.6
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1
Query: 679 PPPPPXXXGGGGGGG 635
PPP P GGGGGGG
Sbjct: 435 PPPEPPEPGGGGGGG 449
Score = 30.7 bits (66), Expect = 6.6
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1
Query: 679 PPPPPXXXGGGGGGG 635
PP PP GGGGGGG
Sbjct: 436 PPEPPEPGGGGGGGG 450
>AY014304-1|AAG42152.1| 290|Homo sapiens HOXD8 protein.
Length = 290
Score = 24.6 bits (51), Expect(2) = 8.8
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 637 PPPXPPPXXGG 669
PPP PPP GG
Sbjct: 116 PPPPPPPPCGG 126
Score = 24.2 bits (50), Expect(2) = 8.8
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +1
Query: 592 PXGGXXXXKXKKKXXPPPXPPP 657
P GG + PPP PPP
Sbjct: 96 PGGGSPAAAYQAAPPPPPHPPP 117
>BC090853-1|AAH90853.1| 289|Homo sapiens HOXD8 protein protein.
Length = 289
Score = 24.6 bits (51), Expect(2) = 8.8
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 637 PPPXPPPXXGG 669
PPP PPP GG
Sbjct: 116 PPPPPPPPCGG 126
Score = 24.2 bits (50), Expect(2) = 8.8
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +1
Query: 592 PXGGXXXXKXKKKXXPPPXPPP 657
P GG + PPP PPP
Sbjct: 96 PGGGSPAAAYQAAPPPPPHPPP 117
>BC038709-1|AAH38709.1| 289|Homo sapiens homeobox D8 protein.
Length = 289
Score = 24.6 bits (51), Expect(2) = 8.8
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 637 PPPXPPPXXGG 669
PPP PPP GG
Sbjct: 116 PPPPPPPPCGG 126
Score = 24.2 bits (50), Expect(2) = 8.8
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +1
Query: 592 PXGGXXXXKXKKKXXPPPXPPP 657
P GG + PPP PPP
Sbjct: 96 PGGGSPAAAYQAAPPPPPHPPP 117
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,187,810
Number of Sequences: 237096
Number of extensions: 1553340
Number of successful extensions: 17598
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13190
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10203625794
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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