BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_T7_B10
(782 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 227 1e-61
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 227 1e-61
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 23 4.2
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 21 9.8
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 227 bits (554), Expect = 1e-61
Identities = 104/142 (73%), Positives = 118/142 (83%)
Frame = -1
Query: 662 PLDFAXXXXXXXXXXXRWPA*FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYF 483
PLDFA F+GLGNC++KIFK+DG+ GLYRGFGVSVQGIIIYRA+YF
Sbjct: 135 PLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYF 194
Query: 482 GFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYK 303
GFYDTARGMLPDPK TP +ISW IAQ VTTVAGI+SYPFDTVRRRMMMQSGRAKS+ILYK
Sbjct: 195 GFYDTARGMLPDPKKTPFLISWGIAQVVTTVAGIVSYPFDTVRRRMMMQSGRAKSEILYK 254
Query: 302 NTIHCWATIAKTEGTSAFXQGS 237
+T+HCWATI KTEG +AF +G+
Sbjct: 255 STLHCWATIYKTEGGNAFFKGA 276
Score = 51.6 bits (118), Expect = 8e-09
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -2
Query: 244 KGAFSNVLRGTGGAFVLVLYDEIKKVL 164
KGAFSN+LRGTGGA VLVLYDEIK +L
Sbjct: 274 KGAFSNILRGTGGALVLVLYDEIKNLL 300
Score = 34.3 bits (75), Expect = 0.001
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 6/126 (4%)
Frame = -1
Query: 599 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPD--PKNTPIV 426
+ G+ +C +I K G + +RG +V +A F F D + + KNT +
Sbjct: 53 YKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFL 112
Query: 425 ISWAIAQTVTTVAGIIS----YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGT 258
+ AG S YP D R R+ G+A + + +C I K +G
Sbjct: 113 RYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGI 172
Query: 257 SAFXQG 240
+ +G
Sbjct: 173 TGLYRG 178
Score = 31.5 bits (68), Expect = 0.009
Identities = 17/33 (51%), Positives = 17/33 (51%)
Frame = -3
Query: 759 GVXKKTQFWXYFAGNSGLPVVPPEPPSLCFVYP 661
GV K TQF YF GN SLCFVYP
Sbjct: 104 GVDKNTQFLRYFVGNLASGGA-AGATSLCFVYP 135
Score = 26.2 bits (55), Expect = 0.34
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = -1
Query: 416 AIAQTVTTVAGIISYPFDTVRRRMMMQ--SGRAKSDILYKNTIHCWATIAKTEGTSAFXQ 243
A A + TTVA P + V+ + +Q S + + YK I C+ I K +G ++ +
Sbjct: 20 AAAISKTTVA-----PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWR 74
Query: 242 GSL 234
G+L
Sbjct: 75 GNL 77
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 227 bits (554), Expect = 1e-61
Identities = 104/142 (73%), Positives = 118/142 (83%)
Frame = -1
Query: 662 PLDFAXXXXXXXXXXXRWPA*FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYF 483
PLDFA F+GLGNC++KIFK+DG+ GLYRGFGVSVQGIIIYRA+YF
Sbjct: 135 PLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYF 194
Query: 482 GFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYK 303
GFYDTARGMLPDPK TP +ISW IAQ VTTVAGI+SYPFDTVRRRMMMQSGRAKS+ILYK
Sbjct: 195 GFYDTARGMLPDPKKTPFLISWGIAQVVTTVAGIVSYPFDTVRRRMMMQSGRAKSEILYK 254
Query: 302 NTIHCWATIAKTEGTSAFXQGS 237
+T+HCWATI KTEG +AF +G+
Sbjct: 255 STLHCWATIYKTEGGNAFFKGA 276
Score = 51.6 bits (118), Expect = 8e-09
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -2
Query: 244 KGAFSNVLRGTGGAFVLVLYDEIKKVL 164
KGAFSN+LRGTGGA VLVLYDEIK +L
Sbjct: 274 KGAFSNILRGTGGALVLVLYDEIKNLL 300
Score = 34.3 bits (75), Expect = 0.001
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 6/126 (4%)
Frame = -1
Query: 599 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPD--PKNTPIV 426
+ G+ +C +I K G + +RG +V +A F F D + + KNT +
Sbjct: 53 YKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFL 112
Query: 425 ISWAIAQTVTTVAGIIS----YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGT 258
+ AG S YP D R R+ G+A + + +C I K +G
Sbjct: 113 RYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGI 172
Query: 257 SAFXQG 240
+ +G
Sbjct: 173 TGLYRG 178
Score = 31.5 bits (68), Expect = 0.009
Identities = 17/33 (51%), Positives = 17/33 (51%)
Frame = -3
Query: 759 GVXKKTQFWXYFAGNSGLPVVPPEPPSLCFVYP 661
GV K TQF YF GN SLCFVYP
Sbjct: 104 GVDKNTQFLRYFVGNLASGGA-AGATSLCFVYP 135
Score = 26.2 bits (55), Expect = 0.34
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = -1
Query: 416 AIAQTVTTVAGIISYPFDTVRRRMMMQ--SGRAKSDILYKNTIHCWATIAKTEGTSAFXQ 243
A A + TTVA P + V+ + +Q S + + YK I C+ I K +G ++ +
Sbjct: 20 AAAISKTTVA-----PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWR 74
Query: 242 GSL 234
G+L
Sbjct: 75 GNL 77
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 22.6 bits (46), Expect = 4.2
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 174 LISSYKTSTKAPPVPLRTLEKAPL 245
L++++KT T+ P + LEK P+
Sbjct: 134 LVNAFKTLTQEPKNTNKFLEKGPV 157
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.4 bits (43), Expect = 9.8
Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +2
Query: 17 FLWNHCITLYLTKNKLLKSFSCLIIHDLRGVAATQN-HIE 133
F +NH + L+ + K + C + H+ G T HI+
Sbjct: 241 FGYNHVLKLHQVAHYGEKVYKCTLCHETFGSKKTMELHIK 280
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,365
Number of Sequences: 438
Number of extensions: 4314
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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