Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_T7_B04
         (781 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF043700-1|AAB97571.2|  328|Caenorhabditis elegans Hypothetical ...    35   0.075
U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical pr...    34   0.099
AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical ...    32   0.40 
AL137227-6|CAB70236.2|  159|Caenorhabditis elegans Hypothetical ...    30   1.6  

>AF043700-1|AAB97571.2|  328|Caenorhabditis elegans Hypothetical
           protein K09H9.4 protein.
          Length = 328

 Score = 34.7 bits (76), Expect = 0.075
 Identities = 21/77 (27%), Positives = 38/77 (49%)
 Frame = -3

Query: 761 EGMTFRPHIKTVRXRAAFIXGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYASVVFAHA 582
           E + F  H K     A F    ++    + +K  +   + LYKT IRP + Y +VV +  
Sbjct: 156 EKLDFSEHWKKSINLAKFQLANIFNQYSTSNKKLM---ILLYKTFIRPRLEYGTVVSSPT 212

Query: 581 ARTHLKSLQVIQSRFCR 531
            ++  K+++ +Q+ F R
Sbjct: 213 KKSDEKAIESVQNAFTR 229


>U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical
           protein F31A9.6 protein.
          Length = 358

 Score = 34.3 bits (75), Expect = 0.099
 Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
 Frame = -3

Query: 671 SKLSLRNK---VTLYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCR 531
           +K S  NK   + LYKT IRP + Y +VV +   ++  K+++ +Q+ F R
Sbjct: 210 NKYSTSNKKLMILLYKTFIRPRLEYGTVVSSPTKKSDEKTIESVQNAFTR 259


>AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical
           protein C44B12.7 protein.
          Length = 389

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 21/66 (31%), Positives = 32/66 (48%)
 Frame = -3

Query: 755 MTFRPHIKTVRXRAAFIXGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYASVVFAHAAR 576
           +TF+PHIK +   A     R   +L S   L       L+KT I P++ Y S V++    
Sbjct: 206 LTFKPHIKKIVSLALL---RCKQLLKSFKSLCPEFYCNLFKTYILPLIEYGSAVYSPKPS 262

Query: 575 THLKSL 558
           + L +L
Sbjct: 263 SSLSTL 268


>AL137227-6|CAB70236.2|  159|Caenorhabditis elegans Hypothetical
           protein F58D5.5 protein.
          Length = 159

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 21/59 (35%), Positives = 26/59 (44%)
 Frame = -2

Query: 675 SKQTVPPQ*GNSLQNLHTPRHDVRKRSVRSRSPHPLEIPSGYSITILQDSRRSALVP*E 499
           S QT P   GN  Q    PRH  R+R  +S SP  L   +  S+     +R   L P E
Sbjct: 26  SHQTTPKSSGNPRQQQAQPRH--RQRKAQSSSPASLAAFASSSVCSSPSARNVPLPPVE 82


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,200,556
Number of Sequences: 27780
Number of extensions: 333187
Number of successful extensions: 899
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 899
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)